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ONTOLOGY REPORT - ANNOTATIONS

Term:deoxyribose phosphate metabolic process
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Accession:GO:0019692 term browser browse the term
Definition:The chemical reactions and pathways involving deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.
Synonyms:exact_synonym: deoxyribose phosphate metabolism


show annotations for term's descendants           Sort by:
2'-deoxyribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in ISO
IEA 		(PMID:16376858)
GO_REF:0000117
GO_REF:0000107
(PMID:12578384) 		RGD
UniProt
Ensembl		 PMID:12578384 PMID:16376858 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:166,235,904...166,260,206
Ensembl chr 1:166,235,900...166,260,944 		JBrowse link
G Rrm2 ribonucleotide reductase regulatory subunit M2 involved_in ISO (PMID:16376858)
(PMID:12578384) 		RGD PMID:12578384 PMID:16376858 NCBI chr 6:47,044,755...47,075,370
Ensembl chr 6:47,067,690...47,075,370 		JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in ISO
IEA 		(PMID:16376858)
GO_REF:0000107 		RGD
Ensembl		 PMID:16376858 GO_REF:0000107 NCBI chr 7:70,962,008...70,993,726
Ensembl chr 7:70,965,590...70,993,670 		JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in ISO
IEA
ISS 		(PMID:22556419)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:22556419 GO_REF:0000024 GO_REF:0000107 NCBI chr15:52,060,297...52,062,822
Ensembl chr15:52,060,293...52,063,661 		JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in IEA
ISO 		GO_REF:0000107
MGI:1857117 (PMID:10720488) 		Ensembl
RGD		 PMID:10720488 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:172,818,176...172,842,293 		JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO
IEA 		(PMID:11133996)
GO_REF:0000107 		RGD
Ensembl		 PMID:11133996 GO_REF:0000107 NCBI chr 5:140,758,219...140,782,706
Ensembl chr 5:140,757,729...140,778,968 		JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:6771276) RGD PMID:6771276 NCBI chr15:26,644,147...26,651,808
Ensembl chr15:26,643,858...26,678,162 		JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:238,147,130...238,183,320
Ensembl chr 2:238,083,686...238,183,370 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) RGD PMID:16462750 NCBI chr12:12,745,388...12,755,034
Ensembl chr12:12,745,450...12,755,749 		JBrowse link
G Urah urate (5-hydroxyiso-) hydrolase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:205,335,399...205,338,795
Ensembl chr 1:205,335,399...205,338,795 		JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
ISO 		GO_REF:0000107
(PMID:8064675) 		Ensembl
RGD		 PMID:8064675 GO_REF:0000107 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:27,282,057...27,344,350 		JBrowse link
dAMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase involved_in IEA
ISO 		GO_REF:0000107
(PMID:2835956) 		Ensembl
RGD		 PMID:2835956 GO_REF:0000107 NCBI chr15:2,912,543...3,295,745
Ensembl chr15:2,912,544...3,295,745 		JBrowse link
G Dck deoxycytidine kinase involved_in IEA
ISO 		GO_REF:0000107
(PMID:8748457) 		Ensembl
RGD		 PMID:8748457 GO_REF:0000107 NCBI chr14:19,589,298...19,610,326
Ensembl chr14:19,589,298...19,610,326 		JBrowse link
G Dguok deoxyguanosine kinase involved_in ISO
IEA 		(PMID:19221117)
GO_REF:0000107 		RGD
Ensembl		 PMID:19221117 GO_REF:0000107 NCBI chr 4:117,544,784...117,572,414
Ensembl chr 4:117,544,773...117,572,414 		JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase acts_upstream_of_or_within ISO
IEA 		(PMID:12163459)
GO_REF:0000107 		RGD
Ensembl		 PMID:12163459 GO_REF:0000107 NCBI chr15:2,912,543...3,295,745
Ensembl chr15:2,912,544...3,295,745 		JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO
IEA 		MGI:1857117|MGI:2155977|MGI:2683027 (PMID:14607964), (PMID:7592575), (PMID:7670465), (PMID:7731963), (PMID:9478961)
GO_REF:0000107 		RGD
Ensembl		 PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 GO_REF:0000107 NCBI chr 3:172,818,174...172,842,283
Ensembl chr 3:172,818,176...172,842,293 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO
IEA 		(PMID:24141705)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:24141705 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:166,179,742...166,214,448
Ensembl chr 3:166,181,588...166,214,410 		JBrowse link
dATP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak2 adenylate kinase 2 IDA RGD PMID:5010295 RGD:5490216 NCBI chr 5:146,609,469...146,649,008
Ensembl chr 5:146,630,445...146,650,610 		JBrowse link
G Ak3 adenylate kinase 3 IDA RGD PMID:5010295 RGD:5490216 NCBI chr 1:236,151,012...236,178,689
Ensembl chr 1:236,151,012...236,178,183 		JBrowse link
G Guk1 guanylate kinase 1 IDA RGD PMID:4307347 RGD:5147877 NCBI chr10:44,471,075...44,488,332
Ensembl chr10:44,471,085...44,479,355 		JBrowse link
G Oga O-GlcNAcase IMP RGD PMID:17573462 RGD:2305953 NCBI chr 1:254,547,311...254,589,596
Ensembl chr 1:254,547,311...254,582,855 		JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:192455 RGD:5133256 NCBI chr 5:133,717,073...133,744,623
Ensembl chr 5:133,717,086...133,744,596 		JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA
ISO 		GO_REF:0000107
(PMID:5472365) 		Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 2:209,293,902...210,159,777
Ensembl chr 2:209,293,929...210,159,778 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA
ISO 		GO_REF:0000107
(PMID:5472365) 		Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 7:72,707,566...72,814,183
Ensembl chr 7:72,721,048...72,814,142 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (PMID:6301357) RGD PMID:6301357 NCBI chr10:101,238,552...101,240,666
Ensembl chr10:101,238,576...101,240,865 		JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in ISO
IEA 		(PMID:5472365)
GO_REF:0000107 		RGD
Ensembl		 PMID:5472365 GO_REF:0000107 NCBI chr20:13,216,693...13,243,016
Ensembl chr20:13,216,691...13,277,562 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO
IEA 		(PMID:7744869)
GO_REF:0000107 		RGD
Ensembl		 PMID:7744869 GO_REF:0000107 NCBI chr14:88,023,155...88,043,036
Ensembl chr14:88,023,351...88,043,034 		JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO
IEA 		(PMID:12849978)
GO_REF:0000107 		RGD
Ensembl		 PMID:12849978 GO_REF:0000107 NCBI chr 3:63,681,671...63,726,194
Ensembl chr 3:63,681,826...63,726,191 		JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 involved_in ISO
IBA
ISS 		(PMID:24467396)
GO_REF:0000033
GO_REF:0000024 		RGD
GO_Central
UniProt		 PMID:24467396 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:191,307,933...191,311,326
Ensembl chr 1:191,307,935...191,313,405 		JBrowse link
G ENSRNOG00000064603 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
deoxyribose phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:172,394,971...172,473,746
Ensembl chr 4:172,394,962...172,490,142 		JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 involved_in IDA
IEA
ISO 		GO_REF:0000107
(PMID:31201273) 		Ensembl
RGD		 PMID:31201273 PMID:4307347 GO_REF:0000107, RGD:5147877 NCBI chr10:44,471,075...44,488,332
Ensembl chr10:44,471,085...44,479,355 		JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in ISO
IEA
ISS 		(PMID:22556419)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:22556419 GO_REF:0000024 GO_REF:0000107 NCBI chr15:52,060,297...52,062,822
Ensembl chr15:52,060,293...52,063,661 		JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in IDA PMID:17234634 MGI PMID:17234634 RGD:8553712 NCBI chr 9:21,978,894...21,981,631
Ensembl chr 9:21,978,894...21,981,631 		JBrowse link
G Gda guanine deaminase involved_in ISO (PMID:8064675) RGD PMID:8064675 NCBI chr 1:228,333,401...228,408,901
Ensembl chr 1:228,333,364...228,409,348 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (PMID:10681516) RGD PMID:10681516 NCBI chr10:101,238,552...101,240,666
Ensembl chr10:101,238,576...101,240,865 		JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO
IEA 		(PMID:11133996)
GO_REF:0000107 		RGD
Ensembl		 PMID:11133996 GO_REF:0000107 NCBI chr 5:140,758,219...140,782,706
Ensembl chr 5:140,757,729...140,778,968 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO
IEA 		(PMID:5560407)
GO_REF:0000107 		RGD
Ensembl		 PMID:5560407 GO_REF:0000107 NCBI chr 1:255,712,797...255,838,285
Ensembl chr 1:255,713,909...255,838,403 		JBrowse link
G Uox urate oxidase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:238,147,130...238,183,320
Ensembl chr 2:238,083,686...238,183,370 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (PMID:16462750) RGD PMID:16462750 NCBI chr12:12,745,388...12,755,034
Ensembl chr12:12,745,450...12,755,749 		JBrowse link
G Urah urate (5-hydroxyiso-) hydrolase involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:205,335,399...205,338,795
Ensembl chr 1:205,335,399...205,338,795 		JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
ISO 		GO_REF:0000107
(PMID:29895374), (PMID:30936145), (PMID:8226898) 		Ensembl
RGD		 PMID:8226898 PMID:29895374 PMID:30936145 GO_REF:0000107 NCBI chr 6:27,282,319...27,344,022
Ensembl chr 6:27,282,057...27,344,350 		JBrowse link
dGMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 IDA RGD PMID:4307347 RGD:5147877 NCBI chr10:44,471,075...44,488,332
Ensembl chr10:44,471,085...44,479,355 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in IDA
IEA
ISO 		PMID:6260203
GO_REF:0000117
GO_REF:0000107
(PMID:1659319), (PMID:9371705) 		UniProt
Ensembl
RGD		 PMID:1659319 PMID:9371705 PMID:6260203 GO_REF:0000107 GO_REF:0000117, RGD:151356611 NCBI chr 1:255,712,797...255,838,285
Ensembl chr 1:255,713,909...255,838,403 		JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt15 nudix hydrolase 15 involved_in ISO
IBA 		(PMID:22556419)
GO_REF:0000033 		RGD
GO_Central		 PMID:22556419 GO_REF:0000033 NCBI chr15:55,117,312...55,123,983 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO
IEA
IBA 		(PMID:24217394)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:24217394 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:166,179,742...166,214,448
Ensembl chr 3:166,181,588...166,214,410 		JBrowse link
dGTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dguok deoxyguanosine kinase acts_upstream_of_or_within ISO (PMID:1664183), (PMID:7918681) RGD PMID:1664183 PMID:7918681 NCBI chr 4:117,544,784...117,572,414
Ensembl chr 4:117,544,773...117,572,414 		JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix hydrolase 16 acts_upstream_of_or_within ISO
IEA 		MGI:96622 (PMID:20081199)
GO_REF:0000107 		RGD
Ensembl		 PMID:20081199 GO_REF:0000107 NCBI chr 8:114,618,706...114,620,761
Ensembl chr 8:114,618,725...114,620,951 		JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:192455 GO_REF:0000033, RGD:5133256 NCBI chr 6:48,802,150...48,813,652
Ensembl chr 6:48,802,321...48,813,652 		JBrowse link
G Dtymk deoxythymidylate kinase involved_in
acts_upstream_of_or_within 		IDA
IEA
ISO
IBA 		GO_REF:0000117
GO_REF:0000002
(PMID:8845311)
GO_REF:0000033
(PMID:12614151) 		UniProt
InterPro
RGD
GO_Central		 PMID:8845311 PMID:12614151 PMID:220041 GO_REF:0000002 GO_REF:0000033 GO_REF:0000117, RGD:5133687 NCBI chr 9:101,762,899...101,771,733
Ensembl chr 9:101,762,899...101,774,504 		JBrowse link
dTMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctd dCMP deaminase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:50,799,699...50,831,398
Ensembl chr16:50,787,875...50,831,186 		JBrowse link
G Dhfr dihydrofolate reductase acts_upstream_of_or_within ISO (PMID:22057276) RGD PMID:22057276 NCBI chr 2:25,320,895...25,346,004 JBrowse link
G Dut deoxyuridine triphosphatase involved_in ISO
IEA 		(PMID:10952785), (PMID:15322254)
GO_REF:0000107 		RGD
Ensembl		 PMID:10952785 PMID:15322254 GO_REF:0000107 NCBI chr 3:132,952,258...132,963,433
Ensembl chr 3:132,952,394...132,964,956 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in
acts_upstream_of_or_within 		ISO (PMID:19513116)
(PMID:22057276) 		RGD PMID:19513116 PMID:22057276 NCBI chr10:45,968,959...45,990,341
Ensembl chr10:45,960,434...45,997,326 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 acts_upstream_of_or_within ISO (PMID:22057276) RGD PMID:22057276 NCBI chr 7:65,244,247...65,249,580
Ensembl chr 7:65,244,247...65,249,567 		JBrowse link
G Tyms thymidylate synthetase involved_in IDA
IEA
ISO
IBA 		GO_REF:0000117
GO_REF:0000107
(PMID:22057276)
GO_REF:0000033
GO_REF:0000002
(PMID:11278511), (PMID:15093541), (PMID:8845352) 		UniProt
Ensembl
RGD
GO_Central
InterPro		 PMID:8845352 PMID:11278511 PMID:15093541 PMID:22057276 PMID:9894005 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:1545055 NCBI chr 9:120,760,057...120,776,149
Ensembl chr 9:120,763,386...120,776,097 		JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (PMID:6301357) RGD PMID:6301357 NCBI chr10:101,238,552...101,240,666
Ensembl chr10:101,238,576...101,240,865 		JBrowse link
G Tymp thymidine phosphorylase involved_in ISO MGI:2183547 (PMID:12077348) RGD PMID:12077348 NCBI chr 7:122,318,396...122,323,716
Ensembl chr 7:122,316,520...122,324,003 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in
NOT|involved_in 		ISO MGI:3699164 (PMID:12077348)
MGI:3699164 (PMID:15772079) 		RGD PMID:12077348 PMID:15772079 NCBI chr14:88,023,155...88,043,036
Ensembl chr14:88,023,351...88,043,034 		JBrowse link
dTTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:48,802,150...48,813,652
Ensembl chr 6:48,802,321...48,813,652 		JBrowse link
G Dtymk deoxythymidylate kinase involved_in IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:220041 GO_REF:0000033, RGD:5133687 NCBI chr 9:101,762,899...101,771,733
Ensembl chr 9:101,762,899...101,774,504 		JBrowse link
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 involved_in ISO (PMID:11277919) RGD PMID:11277919 NCBI chr10:14,421,922...14,422,878
Ensembl chr10:14,421,702...14,422,907 		JBrowse link
G Tbpl1 TATA-box binding protein like 1 acts_upstream_of_or_within ISO MGI:2182539 (PMID:11861477) RGD PMID:11861477 NCBI chr 1:24,597,028...24,622,445
Ensembl chr 1:24,597,074...24,622,439 		JBrowse link
G Tyms thymidylate synthetase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 9:120,760,057...120,776,149
Ensembl chr 9:120,763,386...120,776,097 		JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 NOT|involved_in ISO (PMID:24467396) RGD PMID:24467396 NCBI chr 1:191,307,933...191,311,326
Ensembl chr 1:191,307,935...191,313,405 		JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:192455 RGD:5133256 NCBI chr 5:133,717,073...133,744,623
Ensembl chr 5:133,717,086...133,744,596 		JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:192455 GO_REF:0000033, RGD:5133256 NCBI chr 6:48,802,150...48,813,652
Ensembl chr 6:48,802,321...48,813,652 		JBrowse link
G Dtymk deoxythymidylate kinase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:101,762,899...101,771,733
Ensembl chr 9:101,762,899...101,774,504 		JBrowse link
dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001512.1 involved_in IEA
IBA 		GO_REF:0000041
GO_REF:0000002
GO_REF:0000104
GO_REF:0000033 		UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104
G Dctd dCMP deaminase involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:50,799,699...50,831,398
Ensembl chr16:50,787,875...50,831,186 		JBrowse link
G Dut deoxyuridine triphosphatase involved_in IDA
IEA
IBA 		GO_REF:0000002
GO_REF:0000033
GO_REF:0000041 		InterPro
GO_Central
UniProt
RGD		 PMID:3032103 PMID:1315924 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041, RGD:2300191, RGD:2301218 NCBI chr 3:132,952,258...132,963,433
Ensembl chr 3:132,952,394...132,964,956 		JBrowse link
G ENSRNOG00000069939 involved_in IEA
IBA 		GO_REF:0000041
GO_REF:0000104
GO_REF:0000002
GO_REF:0000033 		UniProt
InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000041 GO_REF:0000104
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA
ISO 		GO_REF:0000107
(PMID:5472365) 		Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 2:209,293,902...210,159,777
Ensembl chr 2:209,293,929...210,159,778 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA
ISO 		GO_REF:0000107
(PMID:5472365) 		Ensembl
RGD		 PMID:5472365 GO_REF:0000107 NCBI chr 7:72,707,566...72,814,183
Ensembl chr 7:72,721,048...72,814,142 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO
IEA 		(PMID:10681516)
GO_REF:0000117 		RGD
UniProt		 PMID:10681516 GO_REF:0000117 NCBI chr10:101,238,552...101,240,666
Ensembl chr10:101,238,576...101,240,865 		JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial acts_upstream_of_or_within
involved_in 		ISO
IEA 		(PMID:12234672)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:12234672 GO_REF:0000107 GO_REF:0000117 NCBI chr10:45,151,902...45,178,687
Ensembl chr10:45,152,505...45,181,308 		JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in ISO
IEA 		(PMID:5472365)
GO_REF:0000107 		RGD
Ensembl		 PMID:5472365 GO_REF:0000107 NCBI chr20:13,216,693...13,243,016
Ensembl chr20:13,216,691...13,277,562 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO
IEA 		(PMID:14154460)
GO_REF:0000107 		RGD
Ensembl		 PMID:14154460 GO_REF:0000107 NCBI chr14:88,023,155...88,043,036
Ensembl chr14:88,023,351...88,043,034 		JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001512.1 involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000104
GO_REF:0000002 		GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104
G Dut deoxyuridine triphosphatase involved_in IDA
IEA
IBA 		GO_REF:0000002
GO_REF:0000033 		InterPro
GO_Central
RGD		 PMID:3032103 PMID:1315924 GO_REF:0000002 GO_REF:0000033, RGD:2300191, RGD:2301218 NCBI chr 3:132,952,258...132,963,433
Ensembl chr 3:132,952,394...132,964,956 		JBrowse link
G ENSRNOG00000069939 involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000104
GO_REF:0000002 		GO_Central
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104
pyrimidine deoxyribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001512.1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117
G Dut deoxyuridine triphosphatase involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:132,952,258...132,963,433
Ensembl chr 3:132,952,394...132,964,956 		JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO
IEA
IBA 		(PMID:10681516)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:10681516 GO_REF:0000033 GO_REF:0000107 NCBI chr10:101,238,552...101,240,666
Ensembl chr10:101,238,576...101,240,865 		JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:45,151,902...45,178,687
Ensembl chr10:45,152,505...45,181,308 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20668
    cellular process 19605
      metabolic process 12252
        carbohydrate derivative metabolic process 1055
          deoxyribose phosphate metabolic process 48
            2'-deoxyribonucleotide metabolic process + 47
            2-deoxyribose 1-phosphate metabolic process + 0
            deoxyribose 1,5-bisphosphate metabolic process + 0
            deoxyribose 5-phosphate metabolic process + 0
            deoxyribose phosphate biosynthetic process + 20
            deoxyribose phosphate catabolic process + 28
Path 2
Term Annotations click to browse term
  biological_process 20668
    cellular process 19605
      metabolic process 12252
        phosphorus metabolic process 2301
          phosphate-containing compound metabolic process 2298
            deoxyribose phosphate metabolic process 48
              2'-deoxyribonucleotide metabolic process + 47
              2-deoxyribose 1-phosphate metabolic process + 0
              deoxyribose 1,5-bisphosphate metabolic process + 0
              deoxyribose 5-phosphate metabolic process + 0
              deoxyribose phosphate biosynthetic process + 20
              deoxyribose phosphate catabolic process + 28
paths to the root