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ONTOLOGY REPORT - ANNOTATIONS


Term:deoxyribose phosphate metabolic process
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Accession:GO:0019692 term browser browse the term
Definition:The chemical reactions and pathways involving deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.
Synonyms:exact_synonym: deoxyribose phosphate metabolism


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dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:52,265,557...52,268,081
Ensembl chr15:52,265,557...52,268,079
JBrowse link
dADP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) RGD PMID:23416111 NCBI chr20:46,044,901...46,162,015
Ensembl chr20:46,044,892...46,162,073
JBrowse link
dAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dck deoxycytidine kinase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:20,935,442...20,952,939
Ensembl chr14:20,935,369...20,953,095
JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO MGI:1857117 (MGI:3640719|PMID:10720488) RGD PMID:10720488 MGI:3640719 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) RGD PMID:11133996 NCBI chr 5:140,888,862...140,909,322
Ensembl chr 5:140,888,973...140,904,207
JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:6771276) RGD PMID:6771276 NCBI chr15:27,875,883...27,883,566
Ensembl chr15:27,875,911...27,883,350
JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) RGD PMID:16462750 MGI:3665448 NCBI chr12:9,446,808...9,456,777
Ensembl chr12:9,446,940...9,455,673
JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO
IEA
(MGI:6478860|PMID:8064675)
GO_REF:0000107
RGD
Ensembl
PMID:8064675 GO_REF:0000107 MGI:6478860 NCBI chr 6:25,149,570...25,211,273
Ensembl chr 6:25,149,235...25,211,494
JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3620422|PMID:12163459)
Ensembl
RGD
PMID:12163459 GO_REF:0000107 MGI:3620422 NCBI chr15:3,033,535...3,435,888
Ensembl chr15:3,033,495...3,435,888
JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO MGI:1857117|MGI:2155977|MGI:2683027 (MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964), (MGI:72798|PMID:7731963), (MGI:74163|PMID:7670465), (MGI:76875|PMID:7592575) RGD PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 MGI:2155238 MGI:3619310 MGI:72798 MGI:74163 MGI:76875 NCBI chr 3:160,115,840...160,139,947
Ensembl chr 3:160,115,842...160,139,947
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:24141705)
(MGI:5828027|PMID:27920203)
RGD PMID:24141705 PMID:27920203 MGI:5828027 NCBI chr 3:153,210,829...153,250,705
Ensembl chr 3:153,210,829...153,250,641
JBrowse link
dATP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak2 adenylate kinase 2 IDA RGD PMID:5010295 RGD:5490216 NCBI chr 5:147,185,474...147,204,050
Ensembl chr 5:147,185,474...147,204,050
JBrowse link
G Ak3 adenylate kinase 3 IDA RGD PMID:5010295 RGD:5490216 NCBI chr 1:247,144,486...247,169,690
Ensembl chr 1:247,144,491...247,169,693
JBrowse link
G Guk1 guanylate kinase 1 IDA RGD PMID:4307347 RGD:5147877 NCBI chr10:45,535,617...45,552,455
Ensembl chr10:45,535,627...45,543,897
JBrowse link
G Oga O-GlcNAcase IMP RGD PMID:17573462 RGD:2305953 NCBI chr 1:265,506,752...265,542,452
Ensembl chr 1:265,507,451...265,542,276
JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:192455 RGD:5133256 NCBI chr 5:133,759,722...133,786,452
Ensembl chr 5:133,759,735...133,786,452
JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in ISO (MGI:53656|PMID:5472365) RGD PMID:5472365 MGI:53656 NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627
JBrowse link
G Dpys dihydropyrimidinase involved_in ISO (MGI:53656|PMID:5472365) RGD PMID:5472365 MGI:53656 NCBI chr 7:78,769,918...78,847,941
Ensembl chr 7:78,769,807...78,847,974
JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:55510|PMID:6301357) RGD PMID:6301357 MGI:55510 NCBI chr10:104,052,807...104,054,805
Ensembl chr10:104,052,831...104,054,805
JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in ISO (MGI:53656|PMID:5472365) RGD PMID:5472365 MGI:53656 NCBI chr20:14,167,383...14,193,724
Ensembl chr20:14,167,586...14,193,690
JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (MGI:73237|PMID:7744869) RGD PMID:7744869 MGI:73237 NCBI chr14:89,314,234...89,334,060
Ensembl chr14:89,314,176...89,334,276
JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (PMID:12849978) RGD PMID:12849978 NCBI chr 3:44,806,106...44,846,464
Ensembl chr 3:44,806,106...44,846,464
JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:24467396)
UniProt
RGD
PMID:24467396, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:198,703,459...198,706,852
Ensembl chr 1:198,703,461...198,706,852
JBrowse link
deoxyribose phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:171,748,254...171,826,414
Ensembl chr 4:171,748,273...171,826,409
JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 involved_in IDA
ISO
(PMID:31201273) RGD PMID:31201273, PMID:4307347 RGD:5147877 NCBI chr10:45,535,617...45,552,455
Ensembl chr10:45,535,627...45,543,897
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in ISO
ISS
(PMID:22556419)
GO_REF:0000024
RGD
UniProt
PMID:22556419 GO_REF:0000024 NCBI chr15:52,265,557...52,268,081
Ensembl chr15:52,265,557...52,268,079
JBrowse link
dGDP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO
IBA
(PMID:23416111)
PMID:21873635
RGD PMID:23416111, PMID:21873635 RGD:13792537 NCBI chr20:46,044,901...46,162,015
Ensembl chr20:46,044,892...46,162,073
JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in IEA
ISO
GO_REF:0000107
(MGI:6478860|PMID:8064675)
Ensembl
RGD
PMID:8064675 GO_REF:0000107 MGI:6478860 NCBI chr 1:238,982,542...239,057,663
Ensembl chr 1:238,982,392...239,057,732
JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:1353788|PMID:10681516) RGD PMID:10681516 MGI:1353788 NCBI chr10:104,052,807...104,054,805
Ensembl chr10:104,052,831...104,054,805
JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) RGD PMID:11133996 NCBI chr 5:140,888,862...140,909,322
Ensembl chr 5:140,888,973...140,904,207
JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (MGI:6478530|PMID:5560407) RGD PMID:5560407 MGI:6478530 NCBI chr 1:266,652,966...266,782,935
Ensembl chr 1:266,659,519...266,782,910
JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) RGD PMID:16462750 MGI:3665448 NCBI chr12:9,446,808...9,456,777
Ensembl chr12:9,446,940...9,455,673
JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
ISO
GO_REF:0000107
(MGI:6306257|PMID:30936145), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
Ensembl
RGD
PMID:8226898 PMID:29895374 PMID:30936145 GO_REF:0000107 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chr 6:25,149,570...25,211,273
Ensembl chr 6:25,149,235...25,211,494
JBrowse link
dGMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 IDA RGD PMID:4307347 RGD:5147877 NCBI chr10:45,535,617...45,552,455
Ensembl chr10:45,535,627...45,543,897
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt15 nudix hydrolase 15 involved_in ISO
IBA
(PMID:22556419)
PMID:21873635
RGD PMID:22556419, PMID:21873635 RGD:13792537 NCBI chr15:55,417,774...55,456,698
Ensembl chr15:55,419,502...55,456,698
JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IBA
ISO
PMID:21873635
(PMID:24217394)
RGD PMID:24217394, PMID:21873635 RGD:13792537 NCBI chr 3:153,210,829...153,250,705
Ensembl chr 3:153,210,829...153,250,641
JBrowse link
dGTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dguok deoxyguanosine kinase acts_upstream_of_or_within ISO (MGI:49028|PMID:1664183), (MGI:69194|PMID:7918681) RGD PMID:1664183 PMID:7918681 MGI:49028 MGI:69194 NCBI chr 4:115,180,433...115,208,061
Ensembl chr 4:115,180,433...115,208,061
JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix hydrolase 16 acts_upstream_of_or_within ISO MGI:96622 (MGI:5009783|PMID:20081199) RGD PMID:20081199 MGI:5009783 NCBI chr 8:113,673,069...113,675,124
Ensembl chr 8:113,672,758...113,675,128
JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:192455, PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:45,683,242...45,694,824
Ensembl chr 6:45,683,234...45,694,822
JBrowse link
G Dtymk deoxythymidylate kinase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
(MGI:77260|PMID:8845311)
PMID:21873635
RGD PMID:8845311, PMID:220041, PMID:21873635 MGI:77260, RGD:5133687, RGD:13792537 NCBI chr 9:100,921,565...100,930,399
Ensembl chr 9:100,921,565...100,930,399
JBrowse link
dTMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctd dCMP deaminase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:47,177,144...47,222,850
Ensembl chr16:47,177,145...47,208,110
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (MGI:3849912|PMID:19513116) RGD PMID:19513116 MGI:3849912 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Tyms thymidylate synthetase involved_in IDA
IBA
ISO
PMID:21873635
(PMID:11278511), (PMID:15093541), (PMID:8845352)
RGD PMID:8845352 PMID:11278511 PMID:15093541, PMID:9894005, PMID:21873635 RGD:1545055, RGD:13792537 NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564
JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:55510|PMID:6301357) RGD PMID:6301357 MGI:55510 NCBI chr10:104,052,807...104,054,805
Ensembl chr10:104,052,831...104,054,805
JBrowse link
G Tymp thymidine phosphorylase involved_in ISO MGI:2183547 (MGI:2183137|PMID:12077348) RGD PMID:12077348 MGI:2183137 NCBI chr 7:130,342,481...130,347,845
Ensembl chr 7:130,342,483...130,347,587
JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO MGI:3699164 (MGI:2183137|PMID:12077348) RGD PMID:12077348 MGI:2183137 NCBI chr14:89,314,234...89,334,060
Ensembl chr14:89,314,176...89,334,276
JBrowse link
dTTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:45,683,242...45,694,824
Ensembl chr 6:45,683,234...45,694,822
JBrowse link
G Dtymk deoxythymidylate kinase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:220041, PMID:21873635 RGD:5133687, RGD:13792537 NCBI chr 9:100,921,565...100,930,399
Ensembl chr 9:100,921,565...100,930,399
JBrowse link
G Tbpl1 TATA-box binding protein like 1 acts_upstream_of_or_within ISO MGI:2182539 (MGI:2159505|PMID:11861477) RGD PMID:11861477 MGI:2159505 NCBI chr 1:23,977,154...24,002,512
Ensembl chr 1:23,977,688...24,002,506
JBrowse link
G Tyms thymidylate synthetase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 9:121,918,875...121,931,564
Ensembl chr 9:121,918,947...121,931,564
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 NOT|involved_in ISO (PMID:24467396) RGD PMID:24467396 NCBI chr 1:198,703,459...198,706,852
Ensembl chr 1:198,703,461...198,706,852
JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 IDA RGD PMID:3010881 RGD:5133253 NCBI chr 5:133,759,722...133,786,452
Ensembl chr 5:133,759,735...133,786,452
JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:192455, PMID:21873635 RGD:5133256, RGD:13792537 NCBI chr 6:45,683,242...45,694,824
Ensembl chr 6:45,683,234...45,694,822
JBrowse link
G Dtymk deoxythymidylate kinase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:100,921,565...100,930,399
Ensembl chr 9:100,921,565...100,930,399
JBrowse link
dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001512.1 involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 Ensembl chr 1:48,565,160...48,565,711 JBrowse link
G Dctd dCMP deaminase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:47,177,144...47,222,850
Ensembl chr16:47,177,145...47,208,110
JBrowse link
G Dut deoxyuridine triphosphatase involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:3032103, PMID:21873635, PMID:1315924 GO_REF:0000041, RGD:2300191, RGD:13792537, RGD:2301218 NCBI chr 3:117,514,399...117,525,450
Ensembl chr 3:117,514,444...117,525,446
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in ISO (MGI:53656|PMID:5472365) RGD PMID:5472365 MGI:53656 NCBI chr 2:221,823,692...222,694,627
Ensembl chr 2:221,823,687...222,694,627
JBrowse link
G Dpys dihydropyrimidinase involved_in ISO (MGI:53656|PMID:5472365) RGD PMID:5472365 MGI:53656 NCBI chr 7:78,769,918...78,847,941
Ensembl chr 7:78,769,807...78,847,974
JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:1353788|PMID:10681516) RGD PMID:10681516 MGI:1353788 NCBI chr10:104,052,807...104,054,805
Ensembl chr10:104,052,831...104,054,805
JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial acts_upstream_of_or_within ISO (MGI:2388903|PMID:12234672) RGD PMID:12234672 MGI:2388903 NCBI chr10:46,216,494...46,244,478
Ensembl chr10:46,216,884...46,243,077
JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in ISO (MGI:53656|PMID:5472365) RGD PMID:5472365 MGI:53656 NCBI chr20:14,167,383...14,193,724
Ensembl chr20:14,167,586...14,193,690
JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (MGI:6478539|PMID:14154460) RGD PMID:14154460 MGI:6478539 NCBI chr14:89,314,234...89,334,060
Ensembl chr14:89,314,176...89,334,276
JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001512.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:48,565,160...48,565,711 JBrowse link
G Dut deoxyuridine triphosphatase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:3032103, PMID:21873635, PMID:1315924 RGD:2300191, RGD:13792537, RGD:2301218 NCBI chr 3:117,514,399...117,525,450
Ensembl chr 3:117,514,444...117,525,446
JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in IBA
ISO
PMID:21873635
(PMID:10681516)
RGD PMID:10681516, PMID:21873635 RGD:13792537 NCBI chr10:104,052,807...104,054,805
Ensembl chr10:104,052,831...104,054,805
JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,216,494...46,244,478
Ensembl chr10:46,216,884...46,243,077
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19599
    metabolic process 11860
      organic substance metabolic process 11392
        organophosphate metabolic process 934
          deoxyribose phosphate metabolic process 38
            2'-deoxyribonucleotide metabolic process + 37
            2-deoxyribose 1-phosphate metabolic process + 0
            deoxyribose 1,5-bisphosphate metabolic process + 0
            deoxyribose 5-phosphate metabolic process + 0
            deoxyribose phosphate biosynthetic process + 12
            deoxyribose phosphate catabolic process + 23
Path 2
Term Annotations click to browse term
  biological_process 19599
    metabolic process 11860
      cellular metabolic process 10814
        phosphorus metabolic process 2862
          phosphate-containing compound metabolic process 2840
            deoxyribose phosphate metabolic process 38
              2'-deoxyribonucleotide metabolic process + 37
              2-deoxyribose 1-phosphate metabolic process + 0
              deoxyribose 1,5-bisphosphate metabolic process + 0
              deoxyribose 5-phosphate metabolic process + 0
              deoxyribose phosphate biosynthetic process + 12
              deoxyribose phosphate catabolic process + 23
paths to the root