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ONTOLOGY REPORT - ANNOTATIONS

Term:L-lysine catabolic process
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Accession:GO:0019477 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid.
Synonyms:exact_synonym: L-lysine breakdown;   L-lysine catabolism;   L-lysine degradation


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L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1350812|PMID:10567240) MGI
Ensembl		 PMID:10567240 GO_REF:0000107 MGI:1350812 NCBI chr 7:122,073,549...122,144,249
Ensembl chr 7:122,064,583...122,144,308 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase involved_in IBA
IDA		 (PMID:21873635)
(PMID:10642506)		 GO_Central
UniProt
UniProt
GO_Central		 PMID:10642506 PMID:21873635 NCBI chr17:29,043,141...29,057,216
Ensembl chr17:28,950,513...29,057,216 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA UniProt
UniProt		 GO_REF:0000041 NCBI chr 4:170,060,222...170,094,292
Ensembl chr 4:170,060,222...170,091,699 		JBrowse link
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt
UniProt		 GO_REF:0000041 NCBI chr 7:122,073,549...122,144,249
Ensembl chr 7:122,064,583...122,144,308 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt
UniProt		 GO_REF:0000041 NCBI chr14:74,881,916...74,903,743
Ensembl chr14:74,881,891...74,903,743 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19824
    metabolic process 13224
      primary metabolic process 11623
        amino acid metabolic process 336
          amino acid catabolic process 121
            aspartate family amino acid catabolic process 18
              lysine catabolic process 7
                L-lysine catabolic process 4
                  L-lysine catabolic process to acetate 0
                  L-lysine catabolic process to acetyl-CoA + 4
                  L-lysine catabolic process to glutarate, by acetylation 0
Path 2
Term Annotations click to browse term
  biological_process 19824
    metabolic process 13224
      cellular metabolic process 10395
        organic acid metabolic process 1115
          oxoacid metabolic process 1107
            carboxylic acid metabolic process 1080
              amino acid metabolic process 336
                alpha-amino acid metabolic process 230
                  aspartate family amino acid metabolic process 51
                    lysine metabolic process 9
                      lysine catabolic process 7
                        L-lysine catabolic process 4
                          L-lysine catabolic process to acetate 0
                          L-lysine catabolic process to acetyl-CoA + 4
                          L-lysine catabolic process to glutarate, by acetylation 0
paths to the root