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ONTOLOGY REPORT - ANNOTATIONS

Term:L-lysine catabolic process
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Accession:GO:0019477 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid.
Synonyms:exact_synonym: L-lysine breakdown;   L-lysine catabolism;   L-lysine degradation


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L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1350812|PMID:10567240) MGI
Ensembl		 PMID:10567240 GO_REF:0000107 MGI:1350812 NCBI chr14:59,950,123...59,993,457
Ensembl chr14:59,951,216...60,000,212 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl		 PMID:21873635 GO_REF:0000107 NCBI chr 9:43,200,343...43,212,288
Ensembl chr 9:43,200,371...43,212,288 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt
UniProt		 GO_REF:0000041 NCBI chr14:59,950,123...59,993,457
Ensembl chr14:59,951,216...60,000,212 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt
UniProt		 GO_REF:0000041 NCBI chr 8:48,003,730...48,025,001
Ensembl chr 8:48,002,211...48,024,999 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17428
    metabolic process 11363
      primary metabolic process 10118
        amino acid metabolic process 293
          amino acid catabolic process 107
            aspartate family amino acid catabolic process 13
              lysine catabolic process 3
                L-lysine catabolic process 3
                  L-lysine catabolic process to acetate 0
                  L-lysine catabolic process to acetyl-CoA + 3
                  L-lysine catabolic process to glutarate, by acetylation 0
Path 2
Term Annotations click to browse term
  biological_process 17428
    metabolic process 11363
      cellular metabolic process 8920
        organic acid metabolic process 955
          oxoacid metabolic process 946
            carboxylic acid metabolic process 931
              amino acid metabolic process 293
                alpha-amino acid metabolic process 210
                  aspartate family amino acid metabolic process 40
                    lysine metabolic process 4
                      lysine catabolic process 3
                        L-lysine catabolic process 3
                          L-lysine catabolic process to acetate 0
                          L-lysine catabolic process to acetyl-CoA + 3
                          L-lysine catabolic process to glutarate, by acetylation 0
paths to the root