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ONTOLOGY REPORT - ANNOTATIONS

Term:L-lysine catabolic process
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Accession:GO:0019477 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid.
Synonyms:exact_synonym: L-lysine breakdown;   L-lysine catabolism;   L-lysine degradation


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L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:1350812|PMID:10567240) MGI
Ensembl		 PMID:10567240 GO_REF:0000107 MGI:1350812 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PIPOX pipecolic acid and sarcosine oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:27,717,083...27,820,776
Ensembl chr17:28,225,831...28,240,210 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASS aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:114,084,792...114,155,558
Ensembl chr 7:126,769,655...126,840,346 		JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:55,433,358...55,455,876
Ensembl chr14:74,278,128...74,300,133 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15348
    metabolic process 9986
      primary metabolic process 8878
        amino acid metabolic process 258
          amino acid catabolic process 89
            aspartate family amino acid catabolic process 10
              lysine catabolic process 3
                L-lysine catabolic process 3
                  L-lysine catabolic process to acetate 0
                  L-lysine catabolic process to acetyl-CoA + 3
                  L-lysine catabolic process to glutarate, by acetylation 0
Path 2
Term Annotations click to browse term
  biological_process 15348
    metabolic process 9986
      cellular metabolic process 7792
        organic acid metabolic process 850
          oxoacid metabolic process 844
            carboxylic acid metabolic process 827
              amino acid metabolic process 258
                alpha-amino acid metabolic process 182
                  aspartate family amino acid metabolic process 36
                    lysine metabolic process 3
                      lysine catabolic process 3
                        L-lysine catabolic process 3
                          L-lysine catabolic process to acetate 0
                          L-lysine catabolic process to acetyl-CoA + 3
                          L-lysine catabolic process to glutarate, by acetylation 0
paths to the root