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ONTOLOGY REPORT - ANNOTATIONS

Term:L-lysine catabolic process
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Accession:GO:0019477 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid.
Synonyms:exact_synonym: L-lysine breakdown;   L-lysine catabolism;   L-lysine degradation


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L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase acts_upstream_of_or_within ISO (PMID:10567240) RGD PMID:10567240 NCBI chr 4:51,606,461...51,663,136
Ensembl chr 4:51,606,462...51,663,136 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in ISO
IBA		 (PMID:10642506)
GO_REF:0000033		 RGD
GO_Central		 PMID:10642506 GO_REF:0000033 NCBI chr10:62,769,874...62,783,484
Ensembl chr10:62,769,900...62,782,370 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:29,509,392...29,544,332
Ensembl chr16:29,509,394...29,544,332 		JBrowse link
G Aass aminoadipate-semialdehyde synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:51,606,461...51,663,136
Ensembl chr 4:51,606,462...51,663,136 		JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 6:104,758,511...104,783,296
Ensembl chr 6:104,758,631...104,783,296 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20134
    cellular process 19326
      metabolic process 12309
        catabolic process 2821
          amino acid catabolic process 111
            alpha-amino acid catabolic process 96
              lysine catabolic process 4
                L-lysine catabolic process 4
                  L-lysine catabolic process to acetate 0
                  L-lysine catabolic process to acetyl-CoA + 4
                  L-lysine catabolic process to glutarate, by acetylation 0
Path 2
Term Annotations click to browse term
  biological_process 20134
    cellular process 19326
      metabolic process 12309
        small molecule metabolic process 1899
          organic acid metabolic process 1034
            oxoacid metabolic process 1023
              carboxylic acid metabolic process 1008
                alpha-amino acid metabolic process 220
                  L-amino acid metabolic process 192
                    aspartate family amino acid metabolic process 43
                      aspartate family amino acid catabolic process 14
                        L-lysine catabolic process 4
                          L-lysine catabolic process to acetate 0
                          L-lysine catabolic process to acetyl-CoA + 4
                          L-lysine catabolic process to glutarate, by acetylation 0
paths to the root