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ONTOLOGY REPORT - ANNOTATIONS


Term:tryptophan catabolic process to kynurenine
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Accession:GO:0019441 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including kynurenine.
Synonyms:exact_synonym: tryptophan breakdown to kynurenine;   tryptophan degradation to kynurenine
 xref: MetaCyc:TRPKYNCAT-PWY



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tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:3587527|PMID:15866519)
GO_REF:0000041
RGD
UniProt
PMID:15866519 PMID:21873635 GO_REF:0000041 MGI:3587527, RGD:13792537 NCBI chr10:103,046,129...103,061,718
Ensembl chr10:103,046,180...103,061,718
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
IBA
GO_REF:0000002
(MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753)
PMID:21873635
InterPro
RGD
PMID:2419335 PMID:11751753 PMID:10719243 PMID:21873635 PMID:11513477 GO_REF:0000002 MGI:2151782 MGI:2156954, RGD:2290190, RGD:13792537, RGD:2290543 NCBI chr16:67,430,684...67,442,459
Ensembl chr16:67,430,578...67,442,730
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
GO_REF:0000041
(PMID:17671174)
(MGI:3712725|PMID:17499941), (MGI:3719924|PMID:17671174)
Ensembl
UniProt
RGD
PMID:17499941 PMID:17671174 PMID:21873635 GO_REF:0000041 GO_REF:0000107 MGI:3712725 MGI:3719924, RGD:13792537 NCBI chr16:67,459,158...67,498,052
Ensembl chr16:67,459,190...67,496,324
JBrowse link
G Kynu kynureninase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:27,778,646...27,929,470
Ensembl chr 3:27,778,772...27,929,488
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:27762317)
GO_REF:0000041
UniProt
RGD
PMID:27762317 GO_REF:0000024 GO_REF:0000041 NCBI chr 2:167,269,581...167,287,511
Ensembl chr 2:167,269,579...167,287,511
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19834
    metabolic process 12042
      cellular metabolic process 10922
        cellular ketone metabolic process 235
          kynurenine metabolic process 10
            tryptophan catabolic process to kynurenine 5
Path 2
Term Annotations click to browse term
  biological_process 19834
    metabolic process 12042
      nitrogen compound metabolic process 10185
        organonitrogen compound metabolic process 6973
          amine metabolic process 128
            cellular amine metabolic process 118
              cellular biogenic amine metabolic process 105
                indolalkylamine metabolic process 12
                  tryptophan metabolic process 12
                    tryptophan catabolic process 9
                      tryptophan catabolic process to kynurenine 5
paths to the root