Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:tryptophan catabolic process to indole-3-acetate
go back to main search page
Accession:GO:0019440 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of tryptophan into other compounds, including indole-3-acetate.
Synonyms:exact_synonym: tryptophan breakdown to indole-3-acetate;   tryptophan catabolic process to IAA;   tryptophan catabolic process to indoleacetic acid;   tryptophan catabolism to indoleacetic acid;   tryptophan degradation to indole-3-acetate
 xref: MetaCyc:TRPIAACAT-PWY

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:32818467), (PMID:32866000) UniProt PMID:32818467 PMID:32866000 NCBI chrNW_004955559:1,012,634...1,047,051
Ensembl chrNW_004955559:1,034,917...1,047,034 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12346
    metabolic process 7467
      hormone metabolic process 170
        auxin metabolic process 1
          indoleacetic acid metabolic process 1
            tryptophan catabolic process to indole-3-acetate 1
Path 2
Term Annotations click to browse term
  biological_process 12346
    metabolic process 7467
      cellular metabolic process 6295
        organic acid metabolic process 663
          oxoacid metabolic process 659
            carboxylic acid metabolic process 651
              carboxylic acid catabolic process 164
                aromatic amino acid family catabolic process 10
                  tryptophan catabolic process 7
                    tryptophan catabolic process to indole-3-acetate 1
paths to the root