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ONTOLOGY REPORT - ANNOTATIONS


Term:alditol metabolic process
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Accession:GO:0019400 term browser browse the term
Definition:The chemical reactions and pathways involving alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.
Synonyms:exact_synonym: alditol metabolism



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galactitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALK1 galactokinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1861531|PMID:10915771) Ensembl
Ensembl
MGI
PMID:10915771 GO_REF:0000107 MGI:1861531 NCBI chr12:5,642,012...5,651,186
Ensembl chr12:5,642,025...5,651,183
JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3722000|PMID:17545671) UniProt
Ensembl
UniProt
MGI
PMID:17545671 GO_REF:0000024 GO_REF:0000107 MGI:3722000 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G LEP leptin ISO RGD PMID:21068181 RGD:5128556 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,323
JBrowse link
G PGP phosphoglycolate phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:39,776,815...39,779,669
Ensembl chr 3:39,762,608...39,778,011
JBrowse link
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCK1 phosphoenolpyruvate carboxykinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2157262|PMID:11792850) MGI
Ensembl
Ensembl
PMID:11792850 GO_REF:0000107 MGI:2157262 NCBI chr17:57,930,507...57,936,523
Ensembl chr17:57,930,432...57,936,522
JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 7:75,187,195...75,197,613
Ensembl chr 7:75,187,197...75,197,733
JBrowse link
glycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GK glycerol kinase involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr  X:26,470,422...26,558,892 JBrowse link
G GK5 glycerol kinase 5 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr13:82,947,737...83,035,589
Ensembl chr13:82,947,372...83,035,531
JBrowse link
G TKFC triokinase and FMN cyclase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:10,158,183...10,171,452
Ensembl chr 2:10,158,188...10,171,449
JBrowse link
G TPI1 triosephosphate isomerase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 5:63,839,473...63,842,853
Ensembl chr 5:63,838,506...63,843,134
JBrowse link
glycerol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPTL3 angiopoietin like 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:149,836,417...149,845,854
Ensembl chr 6:149,832,542...149,845,831
JBrowse link
G COQ2 coenzyme Q2, polyprenyltransferase involved_in ISO (PMID:15153069) UniProt PMID:15153069 NCBI chr 8:135,130,486...135,150,428
Ensembl chr 8:135,130,453...135,150,031
JBrowse link
G COQ3 coenzyme Q3, methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:66,321,288...66,347,088
Ensembl chr 1:66,232,181...66,346,575
JBrowse link
G DYSF dysferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035) MGI PMID:24177035 MGI:5548046 NCBI chr 3:71,020,143...71,237,658
Ensembl chr 3:71,020,144...71,246,967
JBrowse link
G FAXC failed axon connections homolog, metaxin like GST domain containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:66,223,926...66,309,800
Ensembl chr 1:66,232,181...66,346,575
JBrowse link
G FGGY FGGY carbohydrate kinase domain containing involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 6:152,754,923...153,213,179
Ensembl chr 6:152,754,924...153,213,127
JBrowse link
G GK glycerol kinase involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:1097749|PMID:9302256), (MGI:3587535|PMID:16105550), (MGI:5051890|PMID:21536471)
GO_Central
GO_Central
UniProt
MGI
PMID:9302256 PMID:16105550 PMID:21536471 PMID:21873635 GO_REF:0000043 MGI:1097749 MGI:3587535 MGI:5051890 NCBI chr  X:26,470,422...26,558,892 JBrowse link
G MYOF myoferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035) MGI PMID:24177035 MGI:5548046 NCBI chr14:104,770,514...104,941,212
Ensembl chr14:104,770,515...104,941,109
JBrowse link
G SHPK sedoheptulokinase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:49,713,224...49,732,319
Ensembl chr12:49,712,177...49,732,246
JBrowse link
G TKFC triokinase and FMN cyclase involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 2:10,158,183...10,171,452
Ensembl chr 2:10,158,188...10,171,449
JBrowse link
L-xylitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:126,659,198...126,701,084
Ensembl chr 1:126,655,156...126,701,138
JBrowse link
L-xylitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:126,659,198...126,701,084
Ensembl chr 1:126,655,156...126,701,138
JBrowse link
sorbitol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B1 aldo-keto reductase family 1 member B ISO RGD PMID:6690344 PMID:21376710 RGD:1626096 RGD:8548687 NCBI chr18:14,593,516...14,752,316
Ensembl chr18:14,684,036...14,752,310
JBrowse link
sorbitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase involved_in IEA
IBA
(PMID:21873635) Ensembl
UniProt
Ensembl
GO_Central
GO_Central
PMID:21873635 GO_REF:0000104 GO_REF:0000107 NCBI chr 1:126,659,198...126,701,084
Ensembl chr 1:126,655,156...126,701,138
JBrowse link
sorbitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:55679|PMID:6626150), (MGI:60299|PMID:722274) MGI
Ensembl
PMID:722274 PMID:6626150 GO_REF:0000107 MGI:55679 MGI:60299 NCBI chr 1:126,659,198...126,701,084
Ensembl chr 1:126,655,156...126,701,138
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17484
    metabolic process 11006
      primary metabolic process 9822
        carbohydrate metabolic process 567
          alditol metabolic process 20
            alditol biosynthetic process + 6
            alditol catabolic process + 5
            glucosylglycerol metabolic process + 0
            glycerol metabolic process + 17
            hexitol metabolic process + 3
            pentitol metabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 17484
    metabolic process 11006
      organic substance metabolic process 10576
        organic hydroxy compound metabolic process 523
          alcohol metabolic process 338
            polyol metabolic process 108
              alditol metabolic process 20
                alditol biosynthetic process + 6
                alditol catabolic process + 5
                glucosylglycerol metabolic process + 0
                glycerol metabolic process + 17
                hexitol metabolic process + 3
                pentitol metabolic process + 1
paths to the root