Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:alditol metabolic process
go back to main search page
Accession:GO:0019400 term browser browse the term
Definition:The chemical reactions and pathways involving alditols, any polyhydric alcohol derived from the acyclic form of a monosaccharide by reduction of its aldehyde or keto group to an alcoholic group.
Synonyms:exact_synonym: alditol metabolism


show annotations for term's descendants           Sort by:
galactitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALK1 galactokinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:1861531|PMID:10915771) Ensembl
Ensembl
MGI		 PMID:10915771 GO_REF:0000107 MGI:1861531 NCBI chr 9:4,818,558...4,824,845
Ensembl chr 9:4,805,650...4,833,503 		JBrowse link
G H3-3B H3.3 histone B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,805,655...4,808,076
Ensembl chr 9:4,805,650...4,833,503 		JBrowse link
glycerol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:3722000|PMID:17545671) Ensembl
Ensembl
MGI		 PMID:17545671 GO_REF:0000107 MGI:3722000 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579 		JBrowse link
G LEP leptin ISO RGD PMID:21068181 RGD:5128556 NCBI chr14:8,115,396...8,130,946
Ensembl chr14:8,116,122...8,131,395 		JBrowse link
G PGP phosphoglycolate phosphatase involved_in IEA Ensembl GO_REF:0000107
glycerol biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCK1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO
IEA		 (PMID:21873635)
(MGI:2157262|PMID:11792850)		 GO_Central
MGI
Ensembl		 PMID:11792850 PMID:21873635 GO_REF:0000107 MGI:2157262 NCBI chr24:42,538,858...42,544,200
Ensembl chr24:42,538,882...42,544,198 		JBrowse link
G PCK2 phosphoenolpyruvate carboxykinase 2, mitochondrial involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:4,099,016...4,107,870
Ensembl chr 8:4,098,671...4,107,865 		JBrowse link
glycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GK glycerol kinase involved_in IEA UniProt
UniProt		 GO_REF:0000041 NCBI chr  X:25,748,060...25,834,462 JBrowse link
G GK2 glycerol kinase 2 involved_in IEA UniProt
UniProt		 GO_REF:0000041 NCBI chr32:3,731,108...3,732,973
Ensembl chr32:3,731,281...3,732,942 		JBrowse link
G GK5 glycerol kinase 5 involved_in IEA UniProt
UniProt		 GO_REF:0000041 NCBI chr23:37,925,778...37,995,782
Ensembl chr23:37,931,409...37,995,747 		JBrowse link
G TKFC triokinase and FMN cyclase involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr18:55,051,068...55,064,571
Ensembl chr18:55,051,097...55,064,526 		JBrowse link
G TPI1 triosephosphate isomerase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central		 PMID:21873635 NCBI chr27:38,154,519...38,157,900
Ensembl chr27:38,154,519...38,158,137 		JBrowse link
glycerol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPTL3 angiopoietin like 3 involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr 5:47,524,390...47,532,931
Ensembl chr 5:47,525,365...47,532,899 		JBrowse link
G COQ2 coenzyme Q2, polyprenyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:7,143,476...7,162,765
Ensembl chr32:7,139,126...7,162,764 		JBrowse link
G COQ3 coenzyme Q3, methyltransferase involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr12:57,589,993...57,606,486
Ensembl chr12:57,590,662...57,606,447 		JBrowse link
G DYSF dysferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035) MGI PMID:24177035 MGI:5548046 NCBI chr17:51,011,197...51,228,969
Ensembl chr17:51,011,197...51,228,876 		JBrowse link
G GK glycerol kinase acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (MGI:1097749|PMID:9302256), (MGI:3587535|PMID:16105550), (MGI:5051890|PMID:21536471)
(PMID:21873635)		 MGI
Ensembl
UniProt
GO_Central		 PMID:9302256 PMID:16105550 PMID:21536471 PMID:21873635 GO_REF:0000043 GO_REF:0000107 MGI:1097749 MGI:3587535 MGI:5051890 NCBI chr  X:25,748,060...25,834,462 JBrowse link
G GK2 glycerol kinase 2 involved_in IBA
IEA		 (PMID:21873635) GO_Central
UniProt		 PMID:21873635 GO_REF:0000043 NCBI chr32:3,731,108...3,732,973
Ensembl chr32:3,731,281...3,732,942 		JBrowse link
G GK5 glycerol kinase 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:37,925,778...37,995,782
Ensembl chr23:37,931,409...37,995,747 		JBrowse link
G MYOF myoferlin acts_upstream_of_or_within ISO (MGI:5548046|PMID:24177035) MGI PMID:24177035 MGI:5548046 NCBI chr28:7,602,778...7,745,185
Ensembl chr28:7,603,129...7,745,063 		JBrowse link
G TKFC triokinase and FMN cyclase involved_in IEA InterPro
InterPro		 GO_REF:0000002 NCBI chr18:55,051,068...55,064,571
Ensembl chr18:55,051,097...55,064,526 		JBrowse link
L-xylitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase involved_in IEA Ensembl
Ensembl		 GO_REF:0000107 NCBI chr30:11,467,259...11,501,166
Ensembl chr30:11,467,253...11,500,641 		JBrowse link
L-xylitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:11,467,259...11,501,166
Ensembl chr30:11,467,253...11,500,641 		JBrowse link
sorbitol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1B1 aldo-keto reductase family 1 member B ISO RGD PMID:6690344 PMID:21376710 RGD:1626096 RGD:8548687 NCBI chr14:2,991,888...3,006,941
Ensembl chr14:2,991,888...3,006,940 		JBrowse link
sorbitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase involved_in IBA
IEA		 (PMID:21873635) GO_Central
Ensembl
UniProt		 PMID:21873635 GO_REF:0000104 GO_REF:0000107 NCBI chr30:11,467,259...11,501,166
Ensembl chr30:11,467,253...11,500,641 		JBrowse link
sorbitol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SORD sorbitol dehydrogenase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:55679|PMID:6626150), (MGI:60299|PMID:722274) MGI
Ensembl		 PMID:722274 PMID:6626150 GO_REF:0000107 MGI:55679 MGI:60299 NCBI chr30:11,467,259...11,501,166
Ensembl chr30:11,467,253...11,500,641 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17438
    metabolic process 11382
      primary metabolic process 10136
        carbohydrate metabolic process 586
          alditol metabolic process 19
            alditol biosynthetic process + 6
            alditol catabolic process + 6
            glucosylglycerol metabolic process + 0
            glycerol metabolic process + 15
            hexitol metabolic process + 4
            pentitol metabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 17438
    metabolic process 11382
      organic substance metabolic process 10955
        organic hydroxy compound metabolic process 511
          alcohol metabolic process 320
            polyol metabolic process 108
              alditol metabolic process 19
                alditol biosynthetic process + 6
                alditol catabolic process + 6
                glucosylglycerol metabolic process + 0
                glycerol metabolic process + 15
                hexitol metabolic process + 4
                pentitol metabolic process + 1
paths to the root