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ONTOLOGY REPORT - ANNOTATIONS

Term:glycolipid catabolic process
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Accession:GO:0019377 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).
Synonyms:exact_synonym: glycolipid breakdown;   glycolipid catabolism;   glycolipid degradation


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glycolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NAGA alpha-N-acetylgalactosaminidase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,303,950...23,312,409
Ensembl chr10:23,304,354...23,396,068 		JBrowse link
galactolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNLIPRP2 pancreatic lipase related protein 2 involved_in ISO (PMID:15287741), (PMID:17401110), (PMID:18702514), (PMID:20083229) RGD
UniProt		 PMID:8765145 PMID:15287741 PMID:17401110 PMID:18702514 PMID:20083229 RGD:2303162 NCBI chr28:27,190,641...27,212,185
Ensembl chr28:27,139,230...27,212,178 		JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALC galactosylceramidase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 (PMID:11371512) InterPro
MGI
GO_Central
TreeGrafter
Ensembl
UniProt		 PMID:11371512 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:59,266,693...59,324,825
Ensembl chr 8:59,267,818...59,324,967 		JBrowse link
G GBA3 glucosylceramidase beta 3 involved_in ISO (PMID:17595169) UniProt PMID:17595169 NCBI chr 3:87,080,351...87,190,931
Ensembl chr 3:87,081,134...87,190,987 		JBrowse link
G PSAP prosaposin acts_upstream_of_or_within ISO (PMID:11371512) MGI PMID:11371512 NCBI chr 4:22,571,095...22,603,880
Ensembl chr 4:22,572,153...22,603,848 		JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GM2A ganglioside GM2 activator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9223328) Ensembl
MGI
TreeGrafter
InterPro		 PMID:9223328 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:58,002,438...58,016,003
Ensembl chr 4:58,003,946...58,015,753 		JBrowse link
G HEXA hexosaminidase subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7937929), (PMID:9223328)
(PMID:8789434), (PMID:9645704)		 Ensembl
TreeGrafter
MGI		 PMID:7937929 PMID:8789434 PMID:9223328 PMID:9645704 GO_REF:0000107 GO_REF:0000118 NCBI chr30:35,836,788...35,862,525 JBrowse link
G HEXB hexosaminidase subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8566348)
(PMID:10021458), (PMID:12657883), (PMID:12756243), (PMID:15748167), (PMID:9223328)
(PMID:8789434), (PMID:9645704)		 Ensembl
MGI
TreeGrafter		 PMID:8566348 PMID:8789434 PMID:9223328 PMID:9645704 PMID:10021458 More... GO_REF:0000107 GO_REF:0000118 NCBI chr 2:57,221,809...57,248,432
Ensembl chr 2:57,222,186...57,248,417 		JBrowse link
G NEU1 neuraminidase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:1,323,659...1,327,989
Ensembl chr12:1,323,877...1,328,520 		JBrowse link
G NEU2 neuraminidase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr25:44,563,664...44,596,837
Ensembl chr25:44,563,411...44,595,653 		JBrowse link
G NEU3 neuraminidase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr21:23,456,424...23,484,872 JBrowse link
G NEU4 neuraminidase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr25:51,594,865...51,602,500 JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA1 glucosylceramidase beta 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:42,317,704...42,322,285
Ensembl chr 7:42,317,862...42,322,864 		JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chr11:52,264,959...52,277,298
Ensembl chr11:52,265,070...52,277,213 		JBrowse link
G GBA3 glucosylceramidase beta 3 involved_in
NOT|involved_in		 ISO (PMID:26724485)
(PMID:20728381)
(PMID:17595169)		 UniProt PMID:17595169 PMID:20728381 PMID:26724485 NCBI chr 3:87,080,351...87,190,931
Ensembl chr 3:87,081,134...87,190,987 		JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLA galactosidase alpha involved_in IEA
ISO		 Ensembl
RGD		 PMID:34320241 GO_REF:0000107 RGD:401976418 NCBI chr  X:75,311,536...75,320,391
Ensembl chr  X:75,311,536...75,320,249 		JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA3 glucosylceramidase beta 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:87,080,351...87,190,931
Ensembl chr 3:87,081,134...87,190,987 		JBrowse link
G GLA galactosidase alpha acts_upstream_of_or_within ISO (PMID:10841515), (PMID:11752062), (PMID:9122231)
(PMID:10840053), (PMID:15629890)		 MGI PMID:9122231 PMID:10840053 PMID:10841515 PMID:11752062 PMID:15629890 NCBI chr  X:75,311,536...75,320,391
Ensembl chr  X:75,311,536...75,320,249 		JBrowse link
G LCT lactase involved_in ISO PMID:4752949 UniProt PMID:4752949 RGD:151356630 NCBI chr19:38,571,539...38,620,567
Ensembl chr19:38,572,058...38,620,567 		JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRKCD protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:36,723,491...36,751,982
Ensembl chr20:36,723,809...36,752,191 		JBrowse link
regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR127 microRNA mir-127 acts_upstream_of ISO (PMID:25584808) ARUK-UCL PMID:25584808 NCBI chr 8:69,104,938...69,104,997
Ensembl chr 8:69,104,906...69,105,016 		JBrowse link
G MIR16-1 microRNA mir-16-1 acts_upstream_of_or_within ISO (PMID:25584808) ARUK-UCL PMID:25584808 NCBI chr22:1,847,020...1,847,084
Ensembl chr22:1,847,007...1,847,093 		JBrowse link
G MIR16-2 microRNA mir-16-2 acts_upstream_of_or_within ISO (PMID:25584808) ARUK-UCL PMID:25584808 NCBI chr34:26,460,807...26,460,871
Ensembl chr34:26,460,807...26,460,871 		JBrowse link
G MIR195 microRNA mir-195 acts_upstream_of_or_within ISO (PMID:25584808) ARUK-UCL PMID:25584808 NCBI chr 5:32,045,450...32,045,510
Ensembl chr 5:32,045,450...32,045,510 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17878
    metabolic process 10933
      catabolic process 2647
        organic substance catabolic process 2239
          carbohydrate derivative catabolic process 293
            glycolipid catabolic process 21
              galactolipid catabolic process + 4
              glycosphingolipid catabolic process + 19
              sophorosyloxydocosanoate catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 17878
    metabolic process 10933
      primary metabolic process 9494
        lipid metabolic process 1366
          cellular lipid metabolic process 1031
            membrane lipid metabolic process 212
              glycolipid metabolic process 110
                glycolipid catabolic process 21
                  galactolipid catabolic process + 4
                  glycosphingolipid catabolic process + 19
                  sophorosyloxydocosanoate catabolic process 0
paths to the root