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ONTOLOGY REPORT - ANNOTATIONS


Term:glycolipid catabolic process
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Accession:GO:0019377 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).
Synonyms:exact_synonym: glycolipid breakdown;   glycolipid catabolism;   glycolipid degradation


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glycolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naga alpha-N-acetylgalactosaminidase ISO
ISS
(PMID:9741689)
GO_REF:0000024
RGD
UniProt
PMID:9741689 GO_REF:0000024 NCBI chr 7:123,563,047...123,572,074
Ensembl chr 7:123,563,059...123,572,082
JBrowse link
galactolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnliprp2 pancreatic lipase related protein 2 IDA
ISO
IEA
(PMID:15287741), (PMID:17401110), (PMID:18702514), (PMID:20083229)
GO_REF:0000107
RGD
Ensembl
PMID:15287741, PMID:17401110, PMID:18702514, PMID:20083229, PMID:8765145 GO_REF:0000107, RGD:2303162 NCBI chr 1:279,896,973...279,927,600
Ensembl chr 1:279,896,973...279,927,600
JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galc galactosylceramidase ISO
IBA
MGI:MGI:1856218 (MGI:MGI:2183819|PMID:11371512), (MGI:MGI:78941|PMID:8769874)
(PMID:8399327)
PMID:21873635
RGD PMID:8399327, PMID:8769874, PMID:11371512, PMID:21873635 MGI:MGI:2183819, MGI:MGI:78941, RGD:13792537 NCBI chr 6:122,177,195...122,239,411
Ensembl chr 6:122,178,602...122,239,614
JBrowse link
G Gba3 glucosylceramidase beta 3 ISO (PMID:17595169) RGD PMID:17595169 NCBI chr14:64,390,793...64,535,213
Ensembl chr14:64,390,793...64,535,170
JBrowse link
G Psap prosaposin IEA
ISO
GO_REF:0000107
MGI:MGI:2183897 (MGI:MGI:2183819|PMID:11371512)
Ensembl
RGD
PMID:11371512 GO_REF:0000107, MGI:MGI:2183819 NCBI chr20:29,831,302...29,856,876
Ensembl chr20:29,831,314...29,856,875
JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gm2a GM2 ganglioside activator ISO
IBA
MGI:MGI:1861930 (MGI:MGI:894862|PMID:9223328)
PMID:21873635
RGD PMID:9223328, PMID:21873635 MGI:MGI:894862, RGD:13792537 NCBI chr10:40,438,394...40,450,927
Ensembl chr10:40,438,356...40,450,930
JBrowse link
G Hexa hexosaminidase subunit alpha ISO
ISS
MGI:MGI:1857181|MGI:MGI:2429698 (MGI:MGI:1271008|PMID:9645704), (MGI:MGI:69059|PMID:7937929), (MGI:MGI:78473|PMID:8789434), (MGI:MGI:894862|PMID:9223328)
GO_REF:0000024
(PMID:8123671), (PMID:8672428), (PMID:9694901)
RGD
UniProt
PMID:7937929, PMID:8123671, PMID:8672428, PMID:8789434, PMID:9223328, PMID:9645704, PMID:9694901 GO_REF:0000024, MGI:MGI:1271008, MGI:MGI:69059, MGI:MGI:78473, MGI:MGI:894862 NCBI chr 8:64,325,435...64,350,775
Ensembl chr 8:64,325,435...64,350,773
JBrowse link
G Hexb hexosaminidase subunit beta ISO
IEA
ISS
MGI:MGI:1857438|MGI:MGI:2429701 (MGI:MGI:1271008|PMID:9645704), (MGI:MGI:1331265|PMID:10021458), (MGI:MGI:2670850|PMID:12756243), (MGI:MGI:3041658|PMID:12657883), (MGI:MGI:3573807|PMID:15748167), (MGI:MGI:76816|PMID:8566348), (MGI:MGI:78473|PMID:8789434), (MGI:MGI:894862|PMID:9223328)
GO_REF:0000107
GO_REF:0000024
(PMID:8123671), (PMID:8672428)
RGD
Ensembl
UniProt
PMID:8123671, PMID:8566348, PMID:8672428, PMID:8789434, PMID:9223328, PMID:9645704, PMID:10021458, PMID:12657883, PMID:12756243, PMID:15748167 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1271008, MGI:MGI:1331265, MGI:MGI:2670850, MGI:MGI:3041658, MGI:MGI:3573807, MGI:MGI:76816, MGI:MGI:78473, MGI:MGI:894862 NCBI chr 2:27,983,925...28,003,260
Ensembl chr 2:27,984,117...28,003,186
JBrowse link
G Neu1 neuraminidase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,610,995...4,615,258
Ensembl chr20:4,610,995...4,615,247
JBrowse link
G Neu2 neuraminidase 2 IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:MGI:1354405|PMID:10713120)
(PMID:14613940), (PMID:22228546)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10713120, PMID:14613940, PMID:22228546, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:MGI:1354405, RGD:13792537 NCBI chr 9:94,702,095...94,724,903
Ensembl chr 9:94,702,129...94,724,902
JBrowse link
G Neu3 neuraminidase 3 ISS
ISO
IBA
GO_REF:0000024
(MGI:MGI:3765376|PMID:17708748)
(PMID:10861246), (PMID:11298736), (PMID:15847605), (PMID:17334392)
PMID:21873635
UniProt
RGD
PMID:10861246, PMID:11298736, PMID:15847605, PMID:17334392, PMID:17708748, PMID:21873635 GO_REF:0000024, MGI:MGI:3765376, RGD:13792537 NCBI chr 1:164,803,574...164,814,777
Ensembl chr 1:164,803,574...164,814,651
JBrowse link
G Neu4 neuraminidase 4 IBA
ISO
PMID:21873635
(MGI:MGI:4361102|PMID:19506080)
(PMID:15213228), (PMID:15847605)
RGD PMID:15213228, PMID:15847605, PMID:19506080, PMID:21873635 MGI:MGI:4361102, RGD:13792537 NCBI chr 9:101,284,902...101,290,558
Ensembl chr 9:101,284,902...101,290,558
JBrowse link
G NEWGENE_1308624 sialidase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:101,003,455...101,008,365
Ensembl chr 9:101,005,082...101,008,170
JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta ISO
IBA
(PMID:16293621), (PMID:19279011), (PMID:21700325), (PMID:24022302), (PMID:24211208), (PMID:9201993)
PMID:21873635
(MGI:MGI:5141165|PMID:21700325), (MGI:MGI:5501380|PMID:23707074), (MGI:MGI:6271235|PMID:24211208)
RGD PMID:9201993, PMID:16293621, PMID:19279011, PMID:21700325, PMID:23707074, PMID:24022302, PMID:24211208, PMID:21873635 MGI:MGI:5141165, MGI:MGI:5501380, MGI:MGI:6271235, RGD:13792537 NCBI chr 2:188,511,781...188,522,602
Ensembl chr 2:188,516,582...188,522,601
JBrowse link
G Gba2 glucosylceramidase beta 2 IEA
ISO
ISS
GO_REF:0000002
(MGI:MGI:3690511|PMID:17080196), (MGI:MGI:5484792|PMID:23250757)
(PMID:17080196), (PMID:30308956)
GO_REF:0000024
InterPro
RGD
UniProt
PMID:17080196, PMID:23250757, PMID:30308956 GO_REF:0000002, GO_REF:0000024, MGI:MGI:3690511, MGI:MGI:5484792 NCBI chr 5:59,068,081...59,079,719
Ensembl chr 5:59,068,081...59,079,719
JBrowse link
G Gba3 glucosylceramidase beta 3 NOT ISO (PMID:20728381)
(PMID:17595169), (PMID:26724485)
RGD PMID:17595169, PMID:20728381, PMID:26724485 NCBI chr14:64,390,793...64,535,213
Ensembl chr14:64,390,793...64,535,170
JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase, alpha ISO (PMID:10838196), (PMID:8804427) RGD PMID:8804427, PMID:10838196 NCBI chr  X:105,405,915...105,417,331
Ensembl chr  X:105,406,792...105,417,323
JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba3 glucosylceramidase beta 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:64,390,793...64,535,213
Ensembl chr14:64,390,793...64,535,170
JBrowse link
G Gla galactosidase, alpha ISO
IBA
MGI:MGI:1861794 (MGI:MGI:1859538|PMID:10841515), (MGI:MGI:1860035|PMID:10840053), (MGI:MGI:2155538|PMID:11752062), (MGI:MGI:3525994|PMID:15629890), (MGI:MGI:86774|PMID:9122231)
PMID:21873635
RGD PMID:9122231, PMID:10840053, PMID:10841515, PMID:11752062, PMID:15629890, PMID:21873635 MGI:MGI:1859538, MGI:MGI:1860035, MGI:MGI:2155538, MGI:MGI:3525994, MGI:MGI:86774, RGD:13792537 NCBI chr  X:105,405,915...105,417,331
Ensembl chr  X:105,406,792...105,417,323
JBrowse link
G Naga alpha-N-acetylgalactosaminidase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:123,563,047...123,572,074
Ensembl chr 7:123,563,059...123,572,082
JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcd protein kinase C, delta ISO
IEA
(PMID:19279011)
GO_REF:0000107
RGD
Ensembl
PMID:19279011 GO_REF:0000107 NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      catabolic process 2543
        organic substance catabolic process 2095
          carbohydrate derivative catabolic process 143
            glycolipid catabolic process 17
              galactolipid catabolic process + 4
              glycosphingolipid catabolic process + 16
              sophorosyloxydocosanoate catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 20014
    metabolic process 12256
      primary metabolic process 10901
        lipid metabolic process 1378
          cellular lipid metabolic process 1057
            membrane lipid metabolic process 187
              glycolipid metabolic process 93
                glycolipid catabolic process 17
                  galactolipid catabolic process + 4
                  glycosphingolipid catabolic process + 16
                  sophorosyloxydocosanoate catabolic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.