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ONTOLOGY REPORT - ANNOTATIONS

Term:nicotinamide nucleotide biosynthetic process
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Accession:GO:0019359 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of nicotinamide nucleotides, any nucleotide that contains combined nicotinamide.
Synonyms:exact_synonym: nicotinamide nucleotide anabolism;   nicotinamide nucleotide biosynthesis;   nicotinamide nucleotide formation;   nicotinamide nucleotide synthesis


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'de novo' NAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nadsyn1 NAD synthetase 1 involved_in ISO
ISS
IEA		 (PMID:31883644)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:31883644 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:198,981,559...199,009,853
Ensembl chr 1:198,981,604...199,009,869 		JBrowse link
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:103,046,129...103,061,718
Ensembl chr10:103,046,180...103,061,718 		JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA
IBA		 GO_REF:0000104
GO_REF:0000118
GO_REF:0000033		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 6:10,845,235...10,864,863
Ensembl chr 6:10,845,771...10,864,877 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033
GO_REF:0000104		 TreeGrafter
GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr16:67,430,654...67,442,726
Ensembl chr16:67,430,578...67,442,730 		JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in IBA
IEA		 GO_REF:0000033
GO_REF:0000104
GO_REF:0000118		 GO_Central
UniProt
TreeGrafter		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr16:67,459,158...67,498,052
Ensembl chr16:67,459,190...67,496,324 		JBrowse link
G Kmo kynurenine 3-monooxygenase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr13:87,557,080...87,589,334
Ensembl chr13:87,557,286...87,588,881 		JBrowse link
G Kynu kynureninase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:27,778,646...27,929,470
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
NAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspdh aspartate dehydrogenase domain containing involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:94,956,327...94,960,722
Ensembl chr 1:94,958,316...94,960,722 		JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in ISO (PMID:28792876) RGD PMID:28792876 NCBI chr 6:10,845,235...10,864,863
Ensembl chr 6:10,845,771...10,864,877 		JBrowse link
G Kynu kynureninase involved_in ISS
ISO		 GO_REF:0000024
(PMID:28792876)		 UniProt
RGD		 PMID:28792876 GO_REF:0000024 NCBI chr 3:27,778,646...27,929,470
Ensembl chr 3:27,778,772...27,929,488 		JBrowse link
G Nadsyn1 NAD synthetase 1 involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr 1:198,981,559...199,009,853
Ensembl chr 1:198,981,604...199,009,869 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000041
(PMID:15381699)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:15381699 GO_REF:0000033 GO_REF:0000041 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100 		JBrowse link
G Naprt nicotinate phosphoribosyltransferase involved_in IDA
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:8694849 GO_REF:0000041, RGD:2289495 NCBI chr 7:107,576,645...107,580,102
Ensembl chr 7:107,576,627...107,580,102 		JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (MGI:6206974|PMID:27735788)
(PMID:15381699), (PMID:16914673)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:15381699 PMID:16914673 PMID:27735788 GO_REF:0000033 GO_REF:0000041 MGI:6206974 NCBI chr 5:159,910,242...159,928,201
Ensembl chr 5:159,910,242...159,928,180 		JBrowse link
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 involved_in IMP
IBA
IEA		 GO_REF:0000033
GO_REF:0000118
GO_REF:0000041		 GO_Central
TreeGrafter
UniProt
RGD		 PMID:22449973 GO_REF:0000033 GO_REF:0000041 GO_REF:0000118, RGD:13782043 NCBI chr13:65,105,950...65,277,350
Ensembl chr13:65,105,950...65,278,484 		JBrowse link
G Nmnat3 nicotinamide nucleotide adenylyltransferase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000041
(PMID:16914673)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:16914673 GO_REF:0000033 GO_REF:0000041 NCBI chr 8:98,892,168...99,003,912
Ensembl chr 8:98,873,398...99,020,645 		JBrowse link
G Nmrk1 nicotinamide riboside kinase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:216,049,350...216,076,792
Ensembl chr 1:216,049,437...216,076,791 		JBrowse link
G Qprt quinolinate phosphoribosyltransferase involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:8694849 GO_REF:0000033 GO_REF:0000041, RGD:2289495 NCBI chr 1:181,718,189...181,733,486
Ensembl chr 1:181,718,190...181,733,486 		JBrowse link
NAD salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naprt nicotinate phosphoribosyltransferase involved_in IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 7:107,576,645...107,580,102
Ensembl chr 7:107,576,627...107,580,102 		JBrowse link
NADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6pd glucose-6-phosphate dehydrogenase acts_upstream_of_or_within ISO MGI:2182739 (PMID:10627286), (PMID:14757696), (PMID:15271799), (PMID:15998684), (PMID:1953691), (PMID:3377761), (PMID:7439685), (PMID:9067418), (PMID:9169132), (PMID:9330624), (PMID:9539108), (PMID:9627357) RGD PMID:1953691 PMID:3377761 PMID:7439685 PMID:9067418 PMID:9169132 More... NCBI chr  X:152,201,081...152,220,863
Ensembl chr  X:152,201,098...152,220,801 		JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 IMP RGD PMID:21641335 RGD:11522736 NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:134,029,772...134,058,025 		JBrowse link
G Nadk NAD kinase involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:22550069 GO_REF:0000033, RGD:13703105 NCBI chr 5:166,145,708...166,176,328
Ensembl chr 5:166,145,481...166,176,322 		JBrowse link
G Nadk2 NAD kinase 2, mitochondrial involved_in IEA GO_REF:0000104
GO_REF:0000002		 UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chr 2:58,117,674...58,159,815
Ensembl chr 2:58,117,674...58,159,808 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    metabolic process 11835
      organic substance metabolic process 11328
        organonitrogen compound metabolic process 5843
          pyridine-containing compound metabolic process 238
            pyridine-containing compound biosynthetic process 24
              pyridine nucleotide biosynthetic process 19
                nicotinamide nucleotide biosynthetic process 19
                  NAD biosynthetic process + 15
                  NADP biosynthetic process 4
                  nicotinamide nucleotide biosynthetic process from niacinamide 0
Path 2
Term Annotations click to browse term
  biological_process 20413
    metabolic process 11835
      organic substance metabolic process 11328
        organic cyclic compound metabolic process 6260
          nucleobase-containing compound metabolic process 5743
            nucleobase-containing small molecule metabolic process 713
              nucleoside phosphate metabolic process 639
                nucleoside phosphate biosynthetic process 258
                  nucleotide biosynthetic process 253
                    pyridine nucleotide biosynthetic process 19
                      nicotinamide nucleotide biosynthetic process 19
                        NAD biosynthetic process + 15
                        NADP biosynthetic process 4
                        nicotinamide nucleotide biosynthetic process from niacinamide 0
paths to the root