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ONTOLOGY REPORT - ANNOTATIONS


Term:cysteine biosynthetic process
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Accession:GO:0019344 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of cysteine, 2-amino-3-mercaptopropanoic acid.
Synonyms:exact_synonym: cysteine anabolism;   cysteine biosynthesis;   cysteine formation;   cysteine synthesis



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cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:24416422)
PMID:21873635
MGI:1857139 (MGI:3044255|PMID:15030387)
RGD PMID:15030387 PMID:24416422 PMID:21873635 MGI:3044255, RGD:13792537 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
G Cth cystathionine gamma-lyase involved_in IDA
IEA
ISO
ISS
GO_REF:0000041
(PMID:10212249)
GO_REF:0000024
UniProt
RGD
PMID:10212249 PMID:9359866 GO_REF:0000024 GO_REF:0000041, RGD:1359024 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO
IEA
(MGI:5294309|PMID:12468440)
GO_REF:0000107
RGD
Ensembl
PMID:12468440 GO_REF:0000107 MGI:5294309 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442
JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase TAS RGD PMID:9359866 RGD:1359024 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
G Cth cystathionine gamma-lyase involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:19428278)
Ensembl
RGD
PMID:19428278 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    metabolic process 11791
      cellular metabolic process 10675
        organic acid metabolic process 1009
          sulfur amino acid metabolic process 32
            sulfur amino acid biosynthetic process 15
              cysteine biosynthetic process 3
                cysteine biosynthetic process from serine 1
                cysteine biosynthetic process via S-sulfo-L-cysteine 0
                cysteine biosynthetic process via cystathionine 2
Path 2
Term Annotations click to browse term
  biological_process 19512
    metabolic process 11791
      cellular metabolic process 10675
        organic acid metabolic process 1009
          oxoacid metabolic process 978
            carboxylic acid metabolic process 962
              cellular amino acid metabolic process 276
                alpha-amino acid metabolic process 198
                  serine family amino acid metabolic process 40
                    cysteine metabolic process 12
                      cysteine biosynthetic process 3
                        cysteine biosynthetic process from serine 1
                        cysteine biosynthetic process via S-sulfo-L-cysteine 0
                        cysteine biosynthetic process via cystathionine 2
paths to the root