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ONTOLOGY REPORT - ANNOTATIONS

Term:hexose biosynthetic process
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Accession:GO:0019319 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.
Synonyms:exact_synonym: hexose anabolism;   hexose biosynthesis;   hexose formation;   hexose synthesis


show annotations for term's descendants           Sort by:
hexose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst15 carbohydrate sulfotransferase 15 involved_in ISO
IBA
IEA
ISS		 (PMID:11572857)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:11572857 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:187,028,860...187,107,908
Ensembl chr 1:187,028,970...187,107,707 		JBrowse link
fructose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b1 aldo-keto reductase family 1 member B1 involved_in ISO (PMID:17727625), (PMID:29238976) RGD PMID:17727625 PMID:29238976 NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157 		JBrowse link
G Sord sorbitol dehydrogenase involved_in ISO
IEA		 (PMID:3365415), (PMID:6870831), (PMID:8487505)
GO_REF:0000107
MGI:3616090 (PMID:18799757), (PMID:9604875)		 RGD
Ensembl		 PMID:3365415 PMID:6870831 PMID:8487505 PMID:9604875 PMID:18799757 GO_REF:0000107 NCBI chr 3:109,184,697...109,216,133
Ensembl chr 3:109,184,676...109,216,133 		JBrowse link
gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldob aldolase, fructose-bisphosphate B involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:63,889,045...63,902,086
Ensembl chr 5:63,889,046...63,902,116 		JBrowse link
G Aldoc aldolase, fructose-bisphosphate C involved_in IEA
ISO		 GO_REF:0000107
(PMID:24958256)		 Ensembl
RGD		 PMID:24958256 GO_REF:0000107 NCBI chr10:63,217,477...63,221,066
Ensembl chr10:63,217,451...63,221,066 		JBrowse link
G Atf3 activating transcription factor 3 acts_upstream_of_or_within ISO (PMID:11916968) RGD PMID:11916968 NCBI chr13:102,751,278...102,800,520
Ensembl chr13:102,751,321...102,764,631 		JBrowse link
G Atf4 activating transcription factor 4 acts_upstream_of_or_within ISO (PMID:11916968) RGD PMID:11916968 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
G C1qtnf12 C1q and TNF related 12 acts_upstream_of ISO (PMID:22275362) RGD PMID:22275362 NCBI chr 5:166,551,628...166,556,003
Ensembl chr 5:166,551,628...166,556,003 		JBrowse link
G Crtc2 CREB regulated transcription coactivator 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3606826|PMID:16148943)		 UniProt
Ensembl
RGD		 PMID:16148943 GO_REF:0000024 GO_REF:0000107 MGI:3606826 NCBI chr 2:175,709,603...175,719,768
Ensembl chr 2:175,709,644...175,719,763 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20852621)
(MGI:5567906|PMID:20852621)		 UniProt
RGD		 PMID:20852621 GO_REF:0000024 MGI:5567906 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Eno1 enolase 1 involved_in ISO (PMID:30679508) RGD PMID:30679508 NCBI chr 5:160,719,951...160,731,337
Ensembl chr 5:160,719,951...160,731,336 		JBrowse link
G Eno2 enolase 2 IDA RGD PMID:15720133 RGD:2302795 NCBI chr 4:157,572,085...157,580,971
Ensembl chr 4:157,572,088...157,580,980 		JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in IDA
ISO
IBA
IEA		 (PMID:30150719)
GO_REF:0000033
(PMID:19259699), (PMID:20096900)
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:19259699 PMID:20096900 PMID:30150719 PMID:4353083 PMID:11440903 GO_REF:0000033 GO_REF:0000041, RGD:2302851, RGD:2302970 NCBI chr17:2,207,271...2,230,076
Ensembl chr17:2,208,031...2,230,071 		JBrowse link
G Fbp2 fructose-bisphosphatase 2 involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:4353083 PMID:11440903 GO_REF:0000033 GO_REF:0000041, RGD:2302851, RGD:2302970 NCBI chr17:2,236,088...2,253,702
Ensembl chr17:2,236,336...2,253,698 		JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 involved_in TAS
ISO
IBA
IEA
IDA		 (PMID:33359667)
GO_REF:0000033
GO_REF:0000041
(PMID:8211187)		 RGD
GO_Central
UniProt		 PMID:8211187 PMID:33359667 PMID:8865366 PMID:11440903 PMID:4353083 More... GO_REF:0000033 GO_REF:0000041, RGD:728661, RGD:2302970, RGD:2302851, RGD:2302850 NCBI chr10:86,307,400...86,318,766
Ensembl chr10:86,257,668...86,333,804 		JBrowse link
G G6pc3 glucose 6 phosphatase catalytic subunit 3 involved_in IDA
ISO
IBA
IEA		 (PMID:15661744)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:15661744 PMID:4303362 PMID:11440903 PMID:4353083 GO_REF:0000033 GO_REF:0000041, RGD:2302850, RGD:2302970, RGD:2302851 NCBI chr10:87,146,987...87,151,223
Ensembl chr10:87,146,901...87,151,221 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in IDA
ISO
IMP		 (PMID:28258188) RGD PMID:28258188 PMID:15720133 PMID:28258188 RGD:2302795, RGD:13792662 NCBI chr 4:157,962,312...157,967,158
Ensembl chr 4:157,962,343...157,966,235 		JBrowse link
G Gcg glucagon involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:24051374)		 Ensembl
RGD		 PMID:24051374 GO_REF:0000107 NCBI chr 3:47,113,914...47,122,958
Ensembl chr 3:47,113,914...47,122,929 		JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17545671)		 Ensembl
RGD		 PMID:17545671 GO_REF:0000107 NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633 		JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within ISO (PMID:12093800) RGD PMID:12093800 NCBI chr 7:130,842,526...130,851,530
Ensembl chr 7:130,844,138...130,851,529 		JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 acts_upstream_of_or_within ISO MGI:2387347 (PMID:12093800) RGD PMID:12093800 NCBI chr 3:41,800,552...41,937,729
Ensembl chr 3:41,801,930...41,936,901 		JBrowse link
G Gpi glucose-6-phosphate isomerase involved_in IEA
ISO
IBA		 GO_REF:0000043
(PMID:31891762)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:31891762 GO_REF:0000033 GO_REF:0000043 NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086 		JBrowse link
G Gpt2 glutamic--pyruvic transaminase 2 IMP RGD PMID:25865565 RGD:11342811 NCBI chr19:21,526,800...21,561,314
Ensembl chr19:21,517,621...21,560,610 		JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of ISO MGI:95674 (PMID:24051374) RGD PMID:24051374 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Kat2b lysine acetyltransferase 2B acts_upstream_of ISO MGI:2155884|MGI:95674 (PMID:24051374) RGD PMID:24051374 NCBI chr 9:6,562,525...6,667,064
Ensembl chr 9:6,562,288...6,667,064 		JBrowse link
G Lepr leptin receptor involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1856009 (PMID:24051374)		 Ensembl
RGD		 PMID:24051374 GO_REF:0000107 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908 		JBrowse link
G Mdh2 malate dehydrogenase 2 involved_in ISO (PMID:12581790) RGD PMID:12581790 NCBI chr12:20,894,269...20,907,225
Ensembl chr12:20,894,262...20,907,271 		JBrowse link
G Pc pyruvate carboxylase involved_in IDA
ISO
IBA
IEA		 MGI:2449284|MGI:6382162 (PMID:10938127), (PMID:23423574), (PMID:31006591)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:10938127 PMID:23423574 PMID:31006591 PMID:4353083 PMID:6049928 GO_REF:0000033 GO_REF:0000041, RGD:2302851, RGD:2302971 NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in
acts_upstream_of_or_within		 TAS
ISO
IBA
IEA
IDA		 MGI:2449283|MGI:2449284 (PMID:10938127), (PMID:15347677), (PMID:19643083), (PMID:29230018), (PMID:34156032)
MGI:2449283|MGI:2449284 (MGI:6119963|PMID:29230018), (PMID:10938127), (PMID:15347677), (PMID:19643083), (PMID:34156032)
(PMID:11916968)
GO_REF:0000033
(PMID:26971250), (PMID:30193097)
GO_REF:0000041
PMID:4186849		 RGD
GO_Central
UniProt		 PMID:10938127 PMID:11916968 PMID:15347677 PMID:19643083 PMID:26971250 More... GO_REF:0000033 GO_REF:0000041 MGI:6119963, RGD:625518, RGD:8553288, RGD:2302971, RGD:2302970, RGD:2302851, RGD:2302850 NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IDA
ISO
IBA
IEA		 MGI:97501 (PMID:23466304)
GO_REF:0000033
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:23466304 PMID:4353083 PMID:6049928 PMID:11440903 GO_REF:0000033 GO_REF:0000041, RGD:2302851, RGD:2302971, RGD:2302970 NCBI chr15:29,027,891...29,036,729
Ensembl chr15:29,027,894...29,037,283 		JBrowse link
G Per2 period circadian regulator 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5319572|PMID:22504074)		 UniProt
RGD		 PMID:22504074 GO_REF:0000024 MGI:5319572 NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459 		JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in ISO (PMID:24958256) RGD PMID:24958256 NCBI chr 1:240,723,832...240,731,443
Ensembl chr 1:240,723,920...240,738,452 		JBrowse link
G Pgam2 phosphoglycerate mutase 2 IDA RGD PMID:15720133 RGD:2302795 NCBI chr14:80,681,796...80,683,907
Ensembl chr14:80,681,776...80,683,940 		JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in IDA
ISO
IBA
IMP		 MGI:106918 (PMID:19643083)
GO_REF:0000033		 RGD
GO_Central		 PMID:19643083 PMID:15720133 PMID:3091090 GO_REF:0000033, RGD:2302795, RGD:2302860 NCBI chr  X:71,271,454...71,287,429
Ensembl chr  X:71,271,440...71,287,418 		JBrowse link
G Pgk1l1 phosphoglycerate kinase 1 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:42,754,605...42,755,929
Ensembl chr 2:42,754,639...42,755,856 		JBrowse link
G Pgk2 phosphoglycerate kinase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:20,480,367...20,481,933
Ensembl chr 9:20,480,203...20,571,481 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO MGI:1857774 (PMID:15232616) RGD PMID:15232616 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in IEP
ISO
IEA
ISS		 (PMID:15716268)
GO_REF:0000107
(MGI:3579714|PMID:15716268)
(PMID:16753578), (PMID:23142079)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:15716268 PMID:16753578 PMID:23142079 PMID:21212096 GO_REF:0000024 GO_REF:0000107 MGI:3579714, RGD:9585757 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656 		JBrowse link
G Ppp4r3a protein phosphatase 4, regulatory subunit 3A acts_upstream_of ISO (PMID:20876121) RGD PMID:20876121 NCBI chr 6:120,302,508...120,365,907
Ensembl chr 6:120,302,511...120,365,891 		JBrowse link
G Ppp4r3b protein phosphatase 4, regulatory subunit 3B acts_upstream_of ISO (PMID:20876121) RGD PMID:20876121 NCBI chr14:102,917,043...102,965,210
Ensembl chr14:102,917,443...103,068,192 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO
IEA		 (PMID:18466349)
(PMID:16034410)
GO_REF:0000107
(MGI:3584329|PMID:16034410)		 RGD
Ensembl		 PMID:16034410 PMID:18466349 GO_REF:0000107 MGI:3584329 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Sds serine dehydratase involved_in TAS
IEA		 GO_REF:0000041 UniProt
RGD		 PMID:11906824 GO_REF:0000041, RGD:633956 NCBI chr12:36,083,226...36,090,540
Ensembl chr12:36,083,229...36,088,203 		JBrowse link
G Serpina12 serpin family A member 12 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
(PMID:22837305)		 Ensembl
RGD		 PMID:22837305 GO_REF:0000107 NCBI chr 6:122,952,552...122,967,271
Ensembl chr 6:122,952,552...122,967,271 		JBrowse link
G Slc25a11 solute carrier family 25 member 11 involved_in IEA
ISO		 GO_REF:0000107
(PMID:35507647)		 Ensembl
RGD		 PMID:35507647 GO_REF:0000107 NCBI chr10:55,357,590...55,360,441
Ensembl chr10:55,357,597...55,360,410 		JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in IEA
ISO		 GO_REF:0000107
MGI:3028639 (PMID:14701727)		 Ensembl
RGD		 PMID:14701727 GO_REF:0000107 NCBI chr 4:34,179,224...34,361,912
Ensembl chr 4:34,179,224...34,361,902 		JBrowse link
G Slc37a4 solute carrier family 37 member 4 involved_in ISO (PMID:28973635) RGD PMID:28973635 NCBI chr 8:44,723,216...44,729,301
Ensembl chr 8:44,723,339...44,729,301 		JBrowse link
G Slc39a14 solute carrier family 39 member 14 acts_upstream_of ISO (MGI:4950776|PMID:21445361) RGD PMID:21445361 MGI:4950776 NCBI chr15:45,376,806...45,423,549
Ensembl chr15:45,376,917...45,423,524 		JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IEA
ISO
IBA		 GO_REF:0000041
(PMID:31891762)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:31891762 GO_REF:0000033 GO_REF:0000041 NCBI chr 4:157,615,283...157,618,813
Ensembl chr 4:157,615,386...157,619,541 		JBrowse link
G Tpi1l1 triosephosphate isomerase 1 like 1 involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr 8:23,647,760...23,654,967
Ensembl chr 8:23,647,764...23,655,504 		JBrowse link
G Tpi1l2 triosephosphate isomerase 1 like 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:27,101,431...27,102,823
Ensembl chr17:27,101,431...27,102,809 		JBrowse link
G Wdr5 WD repeat domain 5 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1343094|MGI:95674 (PMID:24051374)		 Ensembl
RGD		 PMID:24051374 GO_REF:0000107 NCBI chr 3:10,836,964...10,856,682
Ensembl chr 3:10,837,025...10,856,671 		JBrowse link
negative regulation of gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:11479628)		 UniProt
RGD		 PMID:11479628 GO_REF:0000024 NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564 		JBrowse link
G C1qtnf12 C1q and TNF related 12 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:22275362)		 GO_Central
RGD		 PMID:22275362 GO_REF:0000033 NCBI chr 5:166,551,628...166,556,003
Ensembl chr 5:166,551,628...166,556,003 		JBrowse link
G C1qtnf3 C1q and TNF related 3 acts_upstream_of_or_within
involved_in		 ISO (PMID:20952387) RGD PMID:20952387 NCBI chr 2:59,917,099...59,939,519
Ensembl chr 2:59,917,188...59,939,433 		JBrowse link
G Clk2 CDC-like kinase 2 involved_in ISO (MGI:4429735|PMID:20074525) RGD PMID:20074525 MGI:4429735 NCBI chr 2:174,570,614...174,582,645
Ensembl chr 2:174,570,653...174,588,985 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5914352|PMID:28790135), (MGI:6208175|PMID:29937374)		 UniProt
RGD		 PMID:28790135 PMID:29937374 GO_REF:0000024 MGI:5914352 MGI:6208175 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:30193097) RGD PMID:30193097 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
Ensembl chr 7:113,106,247...113,136,088 		JBrowse link
G Erfe erythroferrone involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 9:91,956,971...91,964,846
Ensembl chr 9:91,956,977...91,964,846 		JBrowse link
G Gck glucokinase involved_in ISO
IEA
ISS		 (PMID:8878425)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:8878425 GO_REF:0000024 GO_REF:0000107 NCBI chr14:80,785,060...80,829,842
Ensembl chr14:80,785,060...80,826,995 		JBrowse link
G Il6 interleukin 6 IDA In liver RGD PMID:16308834 RGD:2306940 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:8069456) RGD PMID:8069456 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
G Kat2a lysine acetyltransferase 2A involved_in ISO (PMID:16753578), (PMID:23142079) RGD PMID:16753578 PMID:23142079 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Lepr leptin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856009 (PMID:24051374)		 Ensembl
RGD		 PMID:24051374 GO_REF:0000107 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908 		JBrowse link
G Mst1 macrophage stimulating 1 involved_in ISO (PMID:19720831) RGD PMID:19720831 NCBI chr 8:108,767,886...108,773,425
Ensembl chr 8:108,768,839...108,773,416 		JBrowse link
G Mtcl2 microtubule crosslinking factor 2 involved_in ISO (MGI:4837302|PMID:20813965) RGD PMID:20813965 MGI:4837302 NCBI chr 3:145,669,102...145,741,578
Ensembl chr 3:145,675,443...145,740,871 		JBrowse link
G Mup4l1 major urinary protein 4 like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:75,221,340...75,224,797
Ensembl chr 5:75,142,157...75,564,845 		JBrowse link
G Obp2a odorant binding protein 2A acts_upstream_of_or_within ISO MGI:2137691 (PMID:21135134) RGD PMID:21135134 NCBI chr 3:8,505,963...8,509,269
Ensembl chr 3:8,505,990...8,509,269 		JBrowse link
G Pgp phosphoglycolate phosphatase involved_in IMP
IEA
ISO		 PMID:26755581
GO_REF:0000107
(PMID:26755581)		 Ensembl
RGD		 PMID:26755581 PMID:26755581 GO_REF:0000107, RGD:10679995 NCBI chr10:13,495,232...13,497,858
Ensembl chr10:13,494,291...13,497,858 		JBrowse link
G Serpina12 serpin family A member 12 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:22837305)		 Ensembl
RGD		 PMID:22837305 GO_REF:0000107 NCBI chr 6:122,952,552...122,967,271
Ensembl chr 6:122,952,552...122,967,271 		JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3606826|PMID:16148943)		 UniProt
Ensembl
RGD		 PMID:16148943 GO_REF:0000024 GO_REF:0000107 MGI:3606826 NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991 		JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:23142079), (PMID:25009184) RGD PMID:23142079 PMID:25009184 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 IMP RGD PMID:21901280 RGD:152995490 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:28655758)		 UniProt
Ensembl
RGD		 PMID:28655758 GO_REF:0000024 GO_REF:0000107 NCBI chr10:6,880,684...6,925,355
Ensembl chr10:6,828,795...6,925,355 		JBrowse link
positive regulation of gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpp19 cAMP-regulated phosphoprotein 19 involved_in ISO (PMID:9653196) RGD PMID:9653196 NCBI chr 8:75,779,640...75,802,474
Ensembl chr 8:75,779,523...75,802,452
Ensembl chr 8:75,779,523...75,802,452 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:6208175|PMID:29937374) RGD PMID:29937374 MGI:6208175 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 IMP RGD PMID:29656108 RGD:150520032 NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794 		JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:28790135)
(MGI:5914352|PMID:28790135)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:28790135 GO_REF:0000024 GO_REF:0000107 MGI:5914352 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 IMP RGD PMID:17526931 RGD:10400884 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428 		JBrowse link
G Foxo1 forkhead box O1 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:12783775)
(PMID:17024043), (PMID:25009184)		 UniProt
RGD		 PMID:12783775 PMID:17024043 PMID:25009184 GO_REF:0000024 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790 		JBrowse link
G Gcg glucagon involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:24051374)		 Ensembl
RGD		 PMID:24051374 GO_REF:0000107 NCBI chr 3:47,113,914...47,122,958
Ensembl chr 3:47,113,914...47,122,929 		JBrowse link
G Gpt glutamic--pyruvic transaminase IDA RGD PMID:25865565 RGD:11342811 NCBI chr 7:108,416,646...108,419,495
Ensembl chr 7:108,416,642...108,419,494 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IMP RGD PMID:24177414 RGD:10445837 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IMP RGD PMID:16893891 PMID:24177414 RGD:1624992, RGD:10445837 NCBI chr 3:152,186,787...152,248,320
Ensembl chr 3:152,186,787...152,248,320 		JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO MGI:95674 (PMID:24051374) RGD PMID:24051374 NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166 		JBrowse link
G Kat2b lysine acetyltransferase 2B acts_upstream_of_or_within ISO MGI:2155884|MGI:95674 (PMID:24051374) RGD PMID:24051374 NCBI chr 9:6,562,525...6,667,064
Ensembl chr 9:6,562,288...6,667,064 		JBrowse link
G Nnmt nicotinamide N-methyltransferase involved_in ISO (MGI:5708799|PMID:26168293)
(PMID:26168293)		 RGD PMID:26168293 MGI:5708799 NCBI chr 8:48,928,663...48,947,734
Ensembl chr 8:48,933,598...48,946,655 		JBrowse link
G Oprm1 opioid receptor, mu 1 IMP RGD PMID:34270714 RGD:401831046 NCBI chr 1:43,160,057...43,413,409
Ensembl chr 1:43,160,057...43,413,409 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within ISO MGI:1857774 (PMID:15232616) RGD PMID:15232616 NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346 		JBrowse link
G Ppp4r3a protein phosphatase 4, regulatory subunit 3A acts_upstream_of_or_within ISO (PMID:20876121) RGD PMID:20876121 NCBI chr 6:120,302,508...120,365,907
Ensembl chr 6:120,302,511...120,365,891 		JBrowse link
G Ppp4r3b protein phosphatase 4, regulatory subunit 3B acts_upstream_of_or_within ISO (PMID:20876121) RGD PMID:20876121 NCBI chr14:102,917,043...102,965,210
Ensembl chr14:102,917,443...103,068,192 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in NAS PMID:11903059 UniProt PMID:11903059 RGD:8554594 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in IEA
ISO		 GO_REF:0000107
(PMID:23292513)		 Ensembl
RGD		 PMID:23292513 GO_REF:0000107 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430 		JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:4941441|PMID:20484139)		 UniProt
Ensembl
RGD		 PMID:20484139 GO_REF:0000024 GO_REF:0000107 MGI:4941441 NCBI chr18:61,229,012...61,294,662
Ensembl chr18:61,229,014...61,294,627 		JBrowse link
G Sirt1 sirtuin 1 involved_in IMP
IEA
ISO		 GO_REF:0000107
(PMID:15692560), (PMID:23142079), (PMID:30193097)
(MGI:5708799|PMID:26168293)		 Ensembl
RGD		 PMID:15692560 PMID:23142079 PMID:26168293 PMID:30193097 PMID:21212096 GO_REF:0000107 MGI:5708799, RGD:9585757 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Sirt7 sirtuin 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:28655758)		 UniProt
RGD		 PMID:28655758 GO_REF:0000024 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Stk11 serine/threonine kinase 11 IMP RGD PMID:17083919 RGD:2291956 NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315 		JBrowse link
G Supt20h SPT20 homolog, SAGA complex component acts_upstream_of_or_within ISO MGI:95674 (PMID:24051374) RGD PMID:24051374 NCBI chr 2:138,897,316...138,930,493
Ensembl chr 2:138,897,416...138,930,495 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:5430317 (PMID:23260145) RGD PMID:23260145 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
G Wdr5 WD repeat domain 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1343094|MGI:95674 (PMID:24051374)		 Ensembl
RGD		 PMID:24051374 GO_REF:0000107 NCBI chr 3:10,836,964...10,856,682
Ensembl chr 3:10,837,025...10,856,671 		JBrowse link
regulation of gluconeogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO
IEA		 (MGI:4412440|PMID:18459129)
GO_REF:0000107
(PMID:18459129)		 RGD
Ensembl		 PMID:18459129 GO_REF:0000107 MGI:4412440 NCBI chr 2:242,858,865...242,883,036
Ensembl chr 2:242,858,865...242,883,147 		JBrowse link
G Cry1 cryptochrome circadian regulator 1 involved_in ISO (MGI:6208175|PMID:29937374)
(PMID:29937374)		 RGD PMID:29937374 MGI:6208175 NCBI chr 7:18,529,823...18,594,092
Ensembl chr 7:18,529,823...18,594,091 		JBrowse link
G Dgkq diacylglycerol kinase, theta involved_in ISO (PMID:23767959) RGD PMID:23767959 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131 		JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in ISO
IEA
ISS		 (PMID:7558035)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:7558035 GO_REF:0000024 GO_REF:0000107 NCBI chr17:2,207,271...2,230,076
Ensembl chr17:2,208,031...2,230,071 		JBrowse link
G Foxo1 forkhead box O1 acts_upstream_of_or_within ISO (PMID:18497885) RGD PMID:18497885 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790 		JBrowse link
G Gnmt glycine N-methyltransferase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3842652 (PMID:17937387)		 GO_Central
RGD		 PMID:17937387 GO_REF:0000033 NCBI chr 9:14,254,675...14,258,028
Ensembl chr 9:14,254,675...14,258,434 		JBrowse link
G Insr insulin receptor IEP RGD PMID:29896241 RGD:14700925 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883 		JBrowse link
G Lep leptin acts_upstream_of_or_within ISO MGI:1856424 (PMID:16513828) RGD PMID:16513828 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Nln neurolysin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4125183 (PMID:24719317)		 Ensembl
RGD		 PMID:24719317 GO_REF:0000107 NCBI chr 2:35,133,634...35,232,927
Ensembl chr 2:35,134,145...35,232,914 		JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857745 (PMID:7628695)		 Ensembl
RGD		 PMID:7628695 GO_REF:0000107 NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO
ISS		 GO_REF:0000107
(PMID:23395176)
(MGI:5495336|PMID:23395176)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:23395176 GO_REF:0000024 GO_REF:0000107 MGI:5495336 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146 		JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:22360721)
GO_REF:0000107
(MGI:5428826|PMID:22360721)		 UniProt
RGD
Ensembl		 PMID:22360721 GO_REF:0000024 GO_REF:0000107 MGI:5428826 NCBI chr10:79,972,550...79,987,074
Ensembl chr10:79,972,556...79,987,085 		JBrowse link
G Ranbp2 RAN binding protein 2 acts_upstream_of_or_within ISO MGI:3693886 (PMID:17069463) RGD PMID:17069463 NCBI chr20:26,442,156...26,493,481
Ensembl chr20:26,442,217...26,493,481 		JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO MGI:3587950 (PMID:22958918) RGD PMID:22958918 NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260 		JBrowse link
G Slc35b4 solute carrier family 35 member B4 acts_upstream_of_or_within ISO (PMID:21507882) RGD PMID:21507882 NCBI chr 4:62,776,993...62,799,013
Ensembl chr 4:62,776,993...62,799,003 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:4431951 (PMID:23028378) RGD PMID:23028378 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
G Zfp692 zinc finger protein 692 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21910974)		 UniProt
RGD		 PMID:21910974 GO_REF:0000024 NCBI chr10:42,484,576...42,496,573
Ensembl chr10:42,488,588...42,496,018 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20133
    cellular process 19325
      metabolic process 12307
        small molecule metabolic process 1905
          monosaccharide metabolic process 292
            monosaccharide biosynthetic process 104
              hexose biosynthetic process 98
                D-allose biosynthetic process 0
                fructose biosynthetic process 2
                fucose biosynthetic process + 0
                galactose biosynthetic process + 0
                gluconeogenesis + 95
                mannose biosynthetic process 0
                rhamnose biosynthetic process 0
                sorbose biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 20133
    cellular process 19325
      metabolic process 12307
        primary metabolic process 10934
          carbohydrate metabolic process 633
            monosaccharide metabolic process 292
              hexose metabolic process 269
                hexose biosynthetic process 98
                  D-allose biosynthetic process 0
                  fructose biosynthetic process 2
                  fucose biosynthetic process + 0
                  galactose biosynthetic process + 0
                  gluconeogenesis + 95
                  mannose biosynthetic process 0
                  rhamnose biosynthetic process 0
                  sorbose biosynthetic process + 0
paths to the root