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ONTOLOGY REPORT - ANNOTATIONS


Term:siderophore biosynthetic process
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Accession:GO:0019290 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of siderophores, low molecular weight Fe(III)-chelating substances made by aerobic or facultatively anaerobic bacteria, especially when growing under iron deficient conditions. The complexes of Fe(3+)-siderophores have very high stability constants and are taken up by specific transport systems by microorganisms; the subsequent release of iron requires enzymatic action.
Synonyms:exact_synonym: siderophore anabolism;   siderophore biosynthesis;   siderophore formation;   siderophore synthesis
 narrow_synonym: siderochrome biosynthesis;   siderochrome biosynthetic process;   siderophore biosynthetic process, peptide formation;   siderophore biosynthetic process, peptide modification
 alt_id: GO:0031178;   GO:0031180



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siderophore biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdh2 3-hydroxybutyrate dehydrogenase 2 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:4820913|PMID:20550936)
UniProt
RGD
PMID:20550936 PMID:21873635 GO_REF:0000024 MGI:4820913, RGD:13792537 NCBI chr 2:223,702,410...223,723,076
Ensembl chr 2:223,702,412...223,723,072
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Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18872
    metabolic process 11588
      secondary metabolic process 64
        secondary metabolite biosynthetic process 25
          siderophore biosynthetic process 1
            1,8-dihydroxynaphthalene-melanin biosynthetic process 0
            achromobactin biosynthetic process 0
            catechol-containing siderophore biosynthetic process + 0
            chrysobactin biosynthetic process 0
            hydroxymate-containing siderophore biosynthetic process + 0
            negative regulation of siderophore biosynthetic process + 0
            positive regulation of siderophore biosynthetic process + 0
            pyochelin biosynthetic process 0
            pyoverdine biosynthetic process 0
            regulation of siderophore biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 18872
    metabolic process 11588
      nitrogen compound metabolic process 9849
        cellular nitrogen compound metabolic process 6524
          cellular amide metabolic process 1511
            peptide metabolic process 1248
              peptide biosynthetic process 1074
                nonribosomal peptide biosynthetic process 16
                  siderophore biosynthetic process 1
                    1,8-dihydroxynaphthalene-melanin biosynthetic process 0
                    achromobactin biosynthetic process 0
                    catechol-containing siderophore biosynthetic process + 0
                    chrysobactin biosynthetic process 0
                    hydroxymate-containing siderophore biosynthetic process + 0
                    negative regulation of siderophore biosynthetic process + 0
                    positive regulation of siderophore biosynthetic process + 0
                    pyochelin biosynthetic process 0
                    pyoverdine biosynthetic process 0
                    regulation of siderophore biosynthetic process + 0
paths to the root