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ONTOLOGY REPORT - ANNOTATIONS

Term:citrulline biosynthetic process
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Accession:GO:0019240 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.
Synonyms:exact_synonym: citrulline anabolism;   citrulline biosynthesis;   citrulline formation;   citrulline synthesis
 xref: MetaCyc:CITRULBIO-PWY


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citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh18a1 aldehyde dehydrogenase 18 family, member A1 involved_in ISO (PMID:11092761), (PMID:26297558) RGD PMID:11092761 PMID:26297558 NCBI chr 1:239,375,657...239,407,956
Ensembl chr 1:239,375,669...239,407,890 		JBrowse link
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:7053379 GO_REF:0000033, RGD:10755426 NCBI chr 6:25,292,133...25,315,078
Ensembl chr 6:25,292,133...25,319,861 		JBrowse link
G Otc ornithine transcarbamylase involved_in IDA
ISO
IBA		 (PMID:2556444), (PMID:8112735)
GO_REF:0000033		 RGD
GO_Central		 PMID:2556444 PMID:8112735 PMID:9472964 GO_REF:0000033, RGD:4144071 NCBI chr  X:12,453,834...12,529,954
Ensembl chr  X:12,453,834...12,566,918 		JBrowse link
negative regulation of citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20134
    cellular process 19326
      metabolic process 12309
        biosynthetic process 8436
          amino acid biosynthetic process 79
            alpha-amino acid biosynthetic process 70
              citrulline biosynthetic process 4
                negative regulation of citrulline biosynthetic process 1
                positive regulation of citrulline biosynthetic process 0
                regulation of citrulline biosynthetic process + 1
Path 2
Term Annotations click to browse term
  biological_process 20134
    cellular process 19326
      metabolic process 12309
        small molecule metabolic process 1899
          organic acid metabolic process 1034
            oxoacid metabolic process 1023
              carboxylic acid metabolic process 1008
                carboxylic acid biosynthetic process 326
                  alpha-amino acid biosynthetic process 70
                    citrulline biosynthetic process 4
                      negative regulation of citrulline biosynthetic process 1
                      positive regulation of citrulline biosynthetic process 0
                      regulation of citrulline biosynthetic process + 1
paths to the root