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ONTOLOGY REPORT - ANNOTATIONS

Term:intermediate filament binding
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Accession:GO:0019215 term browser browse the term
Definition:Binding to an intermediate filament, a distinct elongated structure, characteristically 10 nm in diameter, that occurs in the cytoplasm of higher eukaryotic cells. Intermediate filaments form a fibrous system, composed of chemically heterogeneous subunits and involved in mechanically integrating the various components of the cytoplasmic space.


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intermediate filament binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eppk1 epiplakin 1 enables ISO UniProtKB:P02533|UniProtKB:P04264|UniProtKB:P05783|UniProtKB:P05787|UniProtKB:P08670|UniProtKB:P13647|UniProtKB:P17661 (PMID:15671067), (PMID:16923132) RGD PMID:15671067 PMID:16923132 NCBI chr 7:107,816,919...107,842,946
Ensembl chr 7:107,817,693...107,831,159 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase TAS RGD PMID:12160147 RGD:727402 NCBI chr20:12,055,203...12,068,717
Ensembl chr20:12,055,208...12,068,735 		JBrowse link
G Mtm1 myotubularin 1 enables ISS
ISO		 GO_REF:0000024
(PMID:21135508)		 UniProt
RGD		 PMID:21135508 GO_REF:0000024 NCBI chr 6:488,923...506,882
Ensembl chr 6:488,969...506,860 		JBrowse link
G Nes nestin enables IEA
ISS		 GO_REF:0000002
GO_REF:0000024		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000024 NCBI chr 2:173,437,867...173,447,777
Ensembl chr 2:173,438,734...173,447,777 		JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IPI RGD PMID:11082283 RGD:2299080 NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 IPI RGD PMID:11082283 PMID:11082283 RGD:2299080, RGD:2299080 NCBI chr10:78,898,097...78,903,514
Ensembl chr10:78,897,770...78,903,538
Ensembl chr20:78,897,770...78,903,538 		JBrowse link
G Pkp2 plakophilin 2 enables ISO (PMID:10852826) RGD PMID:10852826 NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730 		JBrowse link
G Synm synemin enables IBA
ISO		 GO_REF:0000033
(PMID:15265691)		 GO_Central
RGD		 PMID:15265691 GO_REF:0000033 NCBI chr 1:121,333,712...121,363,652
Ensembl chr 1:121,333,720...121,363,652 		JBrowse link
keratin filament binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eppk1 epiplakin 1 enables ISO UniProtKB:P05784|UniProtKB:P11679|UniProtKB:Q61781|UniProtKB:Q922U2 (PMID:18285451), (PMID:25617501) RGD PMID:18285451 PMID:25617501 NCBI chr 7:107,816,919...107,842,946
Ensembl chr 7:107,817,693...107,831,159 		JBrowse link
G Fam83h family with sequence similarity 83, member H enables ISO
IBA		 (PMID:23902688)
GO_REF:0000033		 RGD
GO_Central		 PMID:23902688 GO_REF:0000033 NCBI chr 7:107,716,431...107,724,619
Ensembl chr 7:107,716,431...107,728,672 		JBrowse link
G Flg filaggrin enables ISO (PMID:6170061) RGD PMID:6170061 NCBI chr 2:178,884,793...178,912,986 JBrowse link
G Krt14 keratin 14 enables ISO UniProtKB:Q7RTS7 (PMID:20346438) RGD PMID:20346438 NCBI chr10:85,137,786...85,142,054
Ensembl chr10:85,066,802...85,171,799 		JBrowse link
G Sirt1 sirtuin 1 enables ISO
IEA		 UniProtKB:Q5XKE5 (PMID:23382074)
GO_REF:0000107		 RGD
Ensembl		 PMID:23382074 GO_REF:0000107 NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260 		JBrowse link
G Vim vimentin enables ISO
IEA		 UniProtKB:P05787 (PMID:15846844)
GO_REF:0000107		 RGD
Ensembl		 PMID:15846844 GO_REF:0000107 NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  molecular_function 20634
    binding 17722
      intermediate filament binding 13
        keratin filament binding 6
paths to the root