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ONTOLOGY REPORT - ANNOTATIONS

Term:virion assembly
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Accession:GO:0019068 term browser browse the term
Definition:A late phase of the viral life cycle during which all the components necessary for the formation of a mature virion collect at a particular site in the cell and the basic structure of the virus particle is formed.
Synonyms:exact_synonym: viral assembly;   viral particle assembly;   virion assembly and maintenance;   virion organization;   virus assembly;   virus particle assembly
 narrow_synonym: bacteriophage assembly;   phage assembly
 alt_id: GO:0042963


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virion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490 		JBrowse link
G RAB1A RAB1A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:65,149,922...65,193,305
Ensembl chr2A:66,274,809...66,318,290 		JBrowse link
G RAB1B RAB1B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,634,017...61,642,945
Ensembl chr11:64,959,957...64,968,843 		JBrowse link
G RAB43 RAB43, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:126,145,723...126,179,989
Ensembl chr 3:133,504,093...133,538,331 		JBrowse link
G SPCS1 signal peptidase complex subunit 1 involved_in ISO (PMID:24009510), (PMID:29593046) UniProt PMID:24009510 PMID:29593046 NCBI chr 3:52,646,427...52,648,786
Ensembl chr 3:53,873,921...53,876,229 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:644,646...670,860
Ensembl chr20:414,066...431,032 		JBrowse link
G USP6NL USP6 N-terminal like involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:11,470,413...11,542,608
Ensembl chr10:11,453,137...11,590,863 		JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSG101 tumor susceptibility 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:18,518,110...18,564,814
Ensembl chr11:18,189,868...18,248,149 		JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:120,469,840...120,500,394
Ensembl chr12:124,703,077...124,733,889 		JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:49,685,827...49,699,542
Ensembl chr16:69,074,091...69,085,714 		JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:30,098,796...30,146,347
Ensembl chr20:31,236,778...31,285,264 		JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:33,043,148...33,059,564
Ensembl chr 9:33,851,377...33,867,942 		JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:98,571,796...98,623,581
Ensembl chr 9:127,245,508...127,297,645 		JBrowse link
G MVB12A multivesicular body subunit 12A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:16,906,449...16,911,717
Ensembl chr19:17,880,073...17,894,044 		JBrowse link
G MVB12B multivesicular body subunit 12B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:97,444,439...97,624,085
Ensembl chr 9:125,953,845...126,133,369 		JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:33,719,603...33,793,301
Ensembl chr 3:34,016,474...34,093,631 		JBrowse link
G TSG101 tumor susceptibility 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:18,518,110...18,564,814
Ensembl chr11:18,189,868...18,248,149 		JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP1A charged multivesicular body protein 1A involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr16:70,398,021...70,411,383
Ensembl chr16:90,003,892...90,017,653 		JBrowse link
G CHMP1B charged multivesicular body protein 1B involved_in ISO (PMID:24878737) ComplexPortal PMID:24878737 NCBI chr18:2,452,393...2,455,509 JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr19:55,564,622...55,568,214
Ensembl chr19:64,377,986...64,381,417 		JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:87,358,297...87,386,556
Ensembl chr 3:89,471,993...89,501,241 		JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chr2A:86,559,695...86,619,615
Ensembl chr2A:88,106,242...88,165,104 		JBrowse link
G CHMP4A charged multivesicular body protein 4A involved_in IEA UniProt GO_REF:0000117 NCBI chr14:4,985,642...4,989,985 JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr20:30,098,796...30,146,347
Ensembl chr20:31,236,778...31,285,264 		JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:78,259,783...78,286,807
Ensembl chr 8:79,879,716...79,906,852 		JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:33,043,148...33,059,564
Ensembl chr 9:33,851,377...33,867,942 		JBrowse link
G CHMP6 charged multivesicular body protein 6 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:75,415,055...75,423,279
Ensembl chr17:81,144,837...81,151,962 		JBrowse link
G CHMP7 charged multivesicular body protein 7 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:22,497,479...22,513,005
Ensembl chr 8:19,434,829...19,450,221 		JBrowse link
G TM9SF1 transmembrane 9 superfamily member 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr14:4,965,352...4,972,476 JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:49,685,827...49,699,542
Ensembl chr16:69,074,091...69,085,714 		JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:56,749,439...56,782,660
Ensembl chr18:60,060,285...60,095,109 		JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP1A charged multivesicular body protein 1A involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr16:70,398,021...70,411,383
Ensembl chr16:90,003,892...90,017,653 		JBrowse link
G CHMP1B charged multivesicular body protein 1B involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chr18:2,452,393...2,455,509 JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr19:55,564,622...55,568,214
Ensembl chr19:64,377,986...64,381,417 		JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:87,358,297...87,386,556
Ensembl chr 3:89,471,993...89,501,241 		JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chr2A:86,559,695...86,619,615
Ensembl chr2A:88,106,242...88,165,104 		JBrowse link
G CHMP4A charged multivesicular body protein 4A involved_in IEA UniProt GO_REF:0000117 NCBI chr14:4,985,642...4,989,985 JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr20:30,098,796...30,146,347
Ensembl chr20:31,236,778...31,285,264 		JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:78,259,783...78,286,807
Ensembl chr 8:79,879,716...79,906,852 		JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:33,043,148...33,059,564
Ensembl chr 9:33,851,377...33,867,942 		JBrowse link
G CHMP6 charged multivesicular body protein 6 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:75,415,055...75,423,279
Ensembl chr17:81,144,837...81,151,962 		JBrowse link
G CHMP7 charged multivesicular body protein 7 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:22,497,479...22,513,005
Ensembl chr 8:19,434,829...19,450,221 		JBrowse link
G MITD1 microtubule interacting and trafficking domain containing 1 NOT|involved_in ISO (PMID:23045692) UniProt PMID:23045692 NCBI chr2A:100,116,263...100,130,580
Ensembl chr2A:100,097,758...100,111,589 		JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:33,719,603...33,793,301
Ensembl chr 3:34,016,474...34,093,631 		JBrowse link
G TM9SF1 transmembrane 9 superfamily member 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr14:4,965,352...4,972,476 JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:49,685,827...49,699,542
Ensembl chr16:69,074,091...69,085,714 		JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:56,749,439...56,782,660
Ensembl chr18:60,060,285...60,095,109 		JBrowse link
viral RNA genome packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX6 DEAD-box helicase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:113,587,220...113,630,995
Ensembl chr11:117,515,778...117,559,364 		JBrowse link
G PC pyruvate carboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16313
    viral process 329
      virion assembly 30
        viral budding + 21
        viral capsid assembly + 0
        viral genome maturation 0
        viral genome packaging + 2
        viral head-tail joining 0
        viral tail assembly + 0
Path 2
Term Annotations click to browse term
  biological_process 16313
    viral process 329
      viral life cycle 253
        virion assembly 30
          viral budding + 21
          viral capsid assembly + 0
          viral genome maturation 0
          viral genome packaging + 2
          viral head-tail joining 0
          viral tail assembly + 0
paths to the root