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ONTOLOGY REPORT - ANNOTATIONS


Term:viral life cycle
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Accession:GO:0019058 term browser browse the term
Definition:A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.
Synonyms:narrow_synonym: viral assembly, maturation, egress, and release
 related_synonym: lytic viral life cycle;   viral infectious cycle;   viral replication
 alt_id: GO:0019067


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viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FURIN furin, paired basic amino acid cleaving enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:53,455,634...53,472,791
Ensembl chr 7:53,460,017...53,472,790
JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:228,854,587...229,308,054
Ensembl chr 1:228,854,595...229,308,906
JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in IMP
IBA
(PMID:12857889)
(PMID:21873635)
AgBase
GO_Central
PMID:12857889 PMID:21873635 NCBI chr17:31,994,505...32,021,239
Ensembl chr17:31,994,540...32,021,466
JBrowse link
coreceptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:51,317,386...51,358,665 JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KPNA2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chr12:14,283,092...14,296,749
Ensembl chr12:14,283,087...14,297,769
JBrowse link
G KPNA6 karyopherin subunit alpha 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28189564)
(MGI:5898166|PMID:28189564)
Ensembl
MGI
PMID:28189564 GO_REF:0000107 MGI:5898166 NCBI chr 6:88,611,128...88,656,281
Ensembl chr 6:88,611,462...88,656,278
JBrowse link
fusion of virus membrane with host endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:27,668,523...27,674,705
Ensembl chr10:27,668,264...27,674,618
JBrowse link
fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:27,668,523...27,674,705
Ensembl chr10:27,668,264...27,674,618
JBrowse link
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:78,848,797...78,880,733
Ensembl chr11:78,848,794...78,881,272
JBrowse link
G HYAL2 hyaluronidase 2 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,223...32,815,335
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:51,317,386...51,358,665 JBrowse link
intracellular transport of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 involved_in IMP (PMID:25540360) AgBase PMID:25540360 NCBI chr 9:75,414,663...75,760,527
Ensembl chr 9:75,336,441...75,760,523
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXL2 F-box and leucine rich repeat protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:19,128,145...19,206,458
Ensembl chr13:19,127,358...19,221,241
JBrowse link
G FMR1 FMRP translational regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,229...120,399,835
JBrowse link
G PHB prohibitin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:25,596,520...25,609,693
Ensembl chr12:25,584,443...25,609,656
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 chemokine (C-C motif) ligand 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:40,740,468...40,741,970
Ensembl chr12:40,740,023...40,742,022
JBrowse link
G CCNK cyclin K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:120,487,140...120,514,223
Ensembl chr 7:120,487,206...120,514,014
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chr 6:49,437,308...49,460,614 JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in IMP (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:36,988,031...37,005,496
Ensembl chr  X:36,988,031...37,044,769
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chr 1:131,244,818...131,355,240
Ensembl chr 1:131,245,463...131,355,224
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G VAPA VAMP associated protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:98,212,335...98,254,272
Ensembl chr 6:98,207,580...98,254,288
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
G ZBED1 zinc finger BED-type containing 1 involved_in IEA Ensembl GO_REF:0000107
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,195
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST2 bone marrow stromal cell antigen 2 involved_in ISO (PMID:19036818), (PMID:20686043), (PMID:20943977)
(MGI:5437405|PMID:22284121), (MGI:5448513|PMID:21919738)
(MGI:5437427|PMID:20686043)
UniProt PMID:19036818 PMID:20686043 PMID:20943977 PMID:21919738 PMID:22284121 MGI:5437405 MGI:5437427 MGI:5448513 NCBI chr 2:60,305,306...60,308,295
Ensembl chr 2:60,305,252...60,309,936
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in IMP (PMID:20167191) AgBase PMID:20167191 NCBI chr13:204,843,049...204,868,927
Ensembl chr13:204,843,754...204,868,922
JBrowse link
G TRIM15 tripartite motif containing 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:22,730,372...22,742,941
Ensembl chr 7:22,730,644...22,746,668
JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:62,777,236...62,787,342
Ensembl chr 5:62,777,352...62,787,483
JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in ISO (PMID:17005673) UniProt PMID:17005673 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:47,717,898...47,738,540
Ensembl chr12:47,717,907...47,738,477
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:47,755,264...47,800,432
Ensembl chr14:47,754,282...47,799,643
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:447,019...480,121
Ensembl chr11:447,052...480,121
JBrowse link
G RESF1 retroelement silencing factor 1 involved_in ISO (MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:6271895 NCBI chr 5:42,263,560...42,299,596
Ensembl chr 5:42,261,290...42,299,514
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (MGI:5440670|PMID:20164836), (MGI:6271895|PMID:29728365) UniProt PMID:20164836 PMID:29728365 MGI:5440670 MGI:6271895 NCBI chr 4:98,259,801...98,293,238
Ensembl chr 4:98,260,373...98,293,096
JBrowse link
G TASOR transcription activation suppressor involved_in ISO (PMID:29211708) UniProt PMID:29211708 NCBI chr13:38,491,048...38,557,256
Ensembl chr13:38,491,055...38,557,931
JBrowse link
G TRIM28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3842857|PMID:19270682) Ensembl
MGI
PMID:19270682 GO_REF:0000107 MGI:3842857 NCBI chr 6:63,094,382...63,101,532
Ensembl chr 6:63,094,648...63,101,532
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:90,900,585...90,901,854
Ensembl chr 4:90,898,686...90,901,875
JBrowse link
G CD74 CD74 molecule involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 2:151,402,210...151,409,924 JBrowse link
G CIITA class II major histocompatibility complex transactivator involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 3:32,171,706...32,230,775
Ensembl chr 3:32,172,214...32,230,780
JBrowse link
G FCN1 ficolin (collagen/fibrinogen domain containing) 1 involved_in ISO (PMID:22851708) UniProt PMID:22851708 NCBI chr 1:274,125,666...274,132,917 JBrowse link
G FCN2 ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin) involved_in ISO (PMID:22851708) UniProt PMID:22851708 NCBI chr 1:274,106,276...274,111,970
Ensembl chr 1:274,103,877...274,111,970
JBrowse link
G GSN gelsolin involved_in ISO (PMID:23575248) UniProt PMID:23575248 NCBI chr 1:261,295,711...261,372,848
Ensembl chr 1:261,295,713...261,385,287
JBrowse link
G IFITM1 interferon-induced transmembrane protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:124,095...125,495 JBrowse link
G IFITM3 interferon induced transmembrane protein 3 involved_in ISO (PMID:23358889)
(PMID:20943977), (PMID:21253575), (PMID:26354436)
CACAO
UniProt
PMID:20943977 PMID:21253575 PMID:23358889 PMID:26354436 NCBI chr 2:128,658...129,736
Ensembl chr 2:127,152...129,835
JBrowse link
G LOC100626247 interferon-induced transmembrane protein 1-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:133,896...135,271 JBrowse link
G LOC102161418 interferon-induced transmembrane protein 1-like involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5780029|PMID:25738301)
GO_Central
MGI
PMID:21873635 PMID:25738301 MGI:5780029 NCBI chr 2:156,364...157,650 JBrowse link
G LOC733579 tripartite motif protein TRIM5 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 9:4,157,290...4,170,233
Ensembl chr 9:4,157,290...4,170,204
JBrowse link
G LY6E lymphocyte antigen 6 family member E involved_in ISO (PMID:32641482), (PMID:32704094)
(MGI:6448667|PMID:32704094)
UniProt PMID:32641482 PMID:32704094 MGI:6448667 NCBI chr 4:1,336,112...1,341,112 JBrowse link
G MID2 midline 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:88,294,032...88,394,885
Ensembl chr  X:88,294,066...88,393,742
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr 9:26,572,352...26,634,596
Ensembl chr 9:26,572,360...26,634,568
JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr 4:46,787,664...46,854,331
Ensembl chr 4:46,787,659...46,903,999
JBrowse link
G PTX3 pentraxin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:97,273,594...97,279,570
Ensembl chr13:97,273,594...97,279,569
JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr 2:134,844,460...134,939,188 JBrowse link
G SNX3 sorting nexin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:74,306,450...74,349,735
Ensembl chr 1:74,306,453...74,349,335
JBrowse link
G TRIM10 tripartite motif containing 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:22,718,000...22,731,445
Ensembl chr 7:22,715,025...22,732,141
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,729,333...51,743,256
Ensembl chr 2:51,733,180...51,743,256
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:33,184,039...33,212,440
Ensembl chr12:33,184,044...33,212,398
JBrowse link
G TRIM26 tripartite motif containing 26 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:22,757,794...22,767,662
Ensembl chr 7:22,756,345...22,780,174
JBrowse link
G TRIM31 tripartite motif containing 31 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chr 7:22,665,150...22,681,616 JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 3:8,834,260...8,842,524
Ensembl chr 3:8,834,143...8,839,415
JBrowse link
G TRIM59 tripartite motif containing 59 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:100,118,824...100,133,117
Ensembl chr13:100,118,825...100,132,968
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:113,637,437...113,652,577
Ensembl chr14:113,637,585...113,652,577
JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific acts_upstream_of_or_within ISO (MGI:4939544|PMID:21173229) MGI PMID:21173229 MGI:4939544 NCBI chr 4:95,154,230...95,197,308
Ensembl chr 4:95,154,358...95,197,305
JBrowse link
G BANF1 BAF nuclear assembly factor 1 involved_in ISO (PMID:18005698) UniProt PMID:18005698 NCBI chr 2:6,333,451...6,335,326 JBrowse link
G BST2 bone marrow stromal cell antigen 2 involved_in ISO (PMID:20943977)
(MGI:5437405|PMID:22284121), (MGI:5448513|PMID:21919738)
UniProt PMID:20943977 PMID:21919738 PMID:22284121 MGI:5437405 MGI:5448513 NCBI chr 2:60,305,306...60,308,295
Ensembl chr 2:60,305,252...60,309,936
JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10490959) BHF-UCL PMID:10490959 NCBI chr12:39,652,731...39,659,121
Ensembl chr12:39,648,598...39,659,118
JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:103,041,029...103,096,741
Ensembl chr 3:103,041,224...103,096,738
JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in ISO (PMID:23093934) UniProt PMID:23093934 NCBI chr 2:12,250,529...12,263,497
Ensembl chr 2:12,250,155...12,260,985
JBrowse link
G IFIH1 interferon induced with helicase C domain 1 involved_in ISO (PMID:33727702) UniProt PMID:33727702 NCBI chr15:68,930,998...68,985,145
Ensembl chr15:68,928,244...68,985,074
JBrowse link
G IFIT5 interferon induced protein with tetratricopeptide repeats 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:101,254,818...101,266,105
Ensembl chr14:101,254,768...101,267,654
JBrowse link
G IFITM1 interferon-induced transmembrane protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:124,095...125,495 JBrowse link
G IFITM3 interferon induced transmembrane protein 3 involved_in ISO (PMID:20943977), (PMID:21253575) UniProt PMID:20943977 PMID:21253575 NCBI chr 2:128,658...129,736
Ensembl chr 2:127,152...129,835
JBrowse link
G IFNB1 interferon beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:201,850,935...201,851,495
Ensembl chr 1:201,850,935...201,851,495
JBrowse link
G ILF3 interleukin enhancer binding factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:69,413,875...69,443,216
Ensembl chr 2:69,413,870...69,443,216
JBrowse link
G ISG15 ISG15 ubiquitin like modifier involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,363,201...63,364,211
Ensembl chr 6:63,363,173...63,364,208
JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:191,155,853...191,195,601
Ensembl chr 1:191,183,374...191,195,475
JBrowse link
G LOC100622028 tripartite motif-containing protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,197,922...4,204,688
Ensembl chr 9:4,197,922...4,204,664
JBrowse link
G LOC100626247 interferon-induced transmembrane protein 1-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:133,896...135,271 JBrowse link
G LOC102161418 interferon-induced transmembrane protein 1-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:156,364...157,650 JBrowse link
G LTF lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:29,413,886...29,445,751
Ensembl chr13:29,413,886...29,445,737
JBrowse link
G MAVS mitochondrial antiviral signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:31,850,646...31,869,273
Ensembl chr17:31,850,155...31,869,187
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in IMP (PMID:24500530) AgBase PMID:24500530 NCBI chr13:204,843,049...204,868,927
Ensembl chr13:204,843,754...204,868,922
JBrowse link
G N4BP1 NEDD4 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:36,122,189...36,177,965
Ensembl chr 6:36,122,035...36,174,536
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 involved_in IBA
IEA
IDA
(PMID:21873635)
(PMID:20844035)
GO_Central
Ensembl
UniProt
PMID:20844035 PMID:21873635 GO_REF:0000107 NCBI chr14:38,851,083...38,867,427
Ensembl chr14:38,851,918...38,859,409
JBrowse link
G OAS2 2'-5'-oligoadenylate synthetase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:38,827,667...38,847,697
Ensembl chr14:38,827,660...38,860,820
JBrowse link
G OASL 2'-5'-oligoadenylate synthetase like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:40,900,050...40,917,189
Ensembl chr14:40,900,052...40,917,266
JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 involved_in ISO (PMID:22176891) UniProt PMID:22176891 NCBI chr 4:688,511...695,808 JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:86,836,288...86,869,569
Ensembl chr13:86,649,586...86,869,297
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:129,527,704...129,583,693
Ensembl chr 9:129,532,164...129,580,979
JBrowse link
G RNASEL ribonuclease L involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:123,895,045...123,910,386
Ensembl chr 9:123,893,306...123,910,432
JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:128,880,853...128,897,809
Ensembl chr 3:128,877,186...128,897,847
JBrowse link
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:68,942,246...68,947,107
Ensembl chr 2:68,942,449...68,948,991
JBrowse link
G SLPI secretory leukocyte peptidase inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:47,595,804...47,598,364
Ensembl chr17:47,595,158...47,598,575
JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,645,753...31,701,305
Ensembl chr 7:31,645,755...31,701,405
JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:105,009,550...105,264,689
Ensembl chr 9:105,006,986...105,265,595
JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,636...23,703,655
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:10,529,805...10,588,913
Ensembl chr18:10,509,629...10,588,832
JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 involved_in IMP (PMID:25086213) AgBase PMID:25086213
G PPIA peptidylprolyl isomerase A involved_in ISO (PMID:19207730), (PMID:22347431) UniProt PMID:19207730 PMID:22347431 NCBI chr18:50,563,130...50,566,857 JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP3 charged multivesicular body protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,206,921...58,279,252
Ensembl chr 3:58,206,921...58,279,245
JBrowse link
G LOC733579 tripartite motif protein TRIM5 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 9:4,157,290...4,170,233
Ensembl chr 9:4,157,290...4,170,204
JBrowse link
G MID2 midline 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:88,294,032...88,394,885
Ensembl chr  X:88,294,066...88,393,742
JBrowse link
G PML PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:59,405,044...59,450,155
Ensembl chr 7:59,405,048...59,450,150
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,729,333...51,743,256
Ensembl chr 2:51,733,180...51,743,256
JBrowse link
G TRIM13 tripartite motif containing 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:17,785,031...17,850,005
Ensembl chr11:17,792,467...17,849,732
JBrowse link
G TRIM15 tripartite motif containing 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:22,730,372...22,742,941
Ensembl chr 7:22,730,644...22,746,668
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:5,782,133...5,790,628
Ensembl chr 9:5,782,200...5,791,577
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:33,184,039...33,212,440
Ensembl chr12:33,184,044...33,212,398
JBrowse link
G TRIM26 tripartite motif containing 26 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:22,757,794...22,767,662
Ensembl chr 7:22,756,345...22,780,174
JBrowse link
G TRIM27 tripartite motif containing 27 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996
G TRIM28 tripartite motif containing 28 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,094,382...63,101,532
Ensembl chr 6:63,094,648...63,101,532
JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:257,051,421...257,066,911
Ensembl chr 1:257,054,227...257,066,910
JBrowse link
G TRIM35 tripartite motif containing 35 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:11,031,667...11,051,903
Ensembl chr14:11,031,429...11,065,708
JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 3:8,834,260...8,842,524
Ensembl chr 3:8,834,143...8,839,415
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:113,637,437...113,652,577
Ensembl chr14:113,637,585...113,652,577
JBrowse link
negative stranded viral RNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG16L1 autophagy related 16 like 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5552992|PMID:24550300)
GO_Central
MGI
PMID:21873635 PMID:24550300 MGI:5552992 NCBI chr15:133,651,294...133,693,472
Ensembl chr15:133,651,286...133,706,038
JBrowse link
G ATG16L2 autophagy related 16 like 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5552992|PMID:24550300)
GO_Central
MGI
PMID:21873635 PMID:24550300 MGI:5552992 NCBI chr 9:7,346,973...7,360,189
Ensembl chr 9:7,347,001...7,365,627
JBrowse link
G ATG5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5552992|PMID:24550300) Ensembl
MGI
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr 1:72,343,950...72,520,402
Ensembl chr 1:72,270,799...72,520,453
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr13:67,301,756...67,699,141
Ensembl chr13:67,417,938...67,707,660
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:66,398,845...66,435,548
Ensembl chr 9:66,398,227...66,435,577
JBrowse link
G PPIB peptidylprolyl isomerase B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,886,663...107,893,155
Ensembl chr 1:107,886,658...107,897,098
JBrowse link
G STOM stomatin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:261,380,087...261,407,713
Ensembl chr 1:261,377,866...261,407,716
JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,760,379...34,778,301
Ensembl chr17:34,760,379...34,779,251
JBrowse link
G VAPA VAMP associated protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:98,212,335...98,254,272
Ensembl chr 6:98,207,580...98,254,288
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
G YTHDC2 YTH domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:118,003,402...118,092,176
Ensembl chr 2:117,871,336...118,104,508
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV2 caveolin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:29,699,012...29,707,277
Ensembl chr18:29,699,020...29,707,277
JBrowse link
G LOC100738134 zinc finger protein 501 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:27,930,889...27,958,202
Ensembl chr13:27,930,928...27,944,388
JBrowse link
G PC pyruvate carboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,430...5,587,797
JBrowse link
G VAPA VAMP associated protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:98,212,335...98,254,272
Ensembl chr 6:98,207,580...98,254,288
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMR1 FMRP translational regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,229...120,399,835
JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOP2A DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,001,300...22,028,452
Ensembl chr12:22,001,336...22,028,454
JBrowse link
G TOP2B DNA topoisomerase II beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:12,507,738...12,575,042
Ensembl chr13:12,507,138...12,575,583
JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSG101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) UniProt PMID:11595185 PMID:15218037 NCBI chr 2:40,673,187...40,720,681 JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:29,963,087...29,994,650
Ensembl chr14:29,962,042...29,994,650
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chr 6:17,657,792...17,669,560 JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSG basigin involved_in ISO (PMID:29739904)
(PMID:11353871), (PMID:15688292)
UniProt PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr 2:77,735,586...77,743,451 JBrowse link
G CD4 CD4 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,892,129...63,918,547
Ensembl chr 5:63,892,132...63,918,669
JBrowse link
G CD74 CD74 molecule involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chr 2:151,402,210...151,409,924 JBrowse link
G LGALS1 galectin 1 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr 5:10,149,069...10,152,514
Ensembl chr 5:10,149,062...10,156,210
JBrowse link
G LGALS9 galectin 9 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr12:44,155,079...44,173,634 JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in IMP (PMID:11277703) AgBase PMID:11277703 NCBI chr 9:46,823,552...46,891,564
Ensembl chr 9:46,789,726...46,891,233
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,121,816...1,131,291
Ensembl chr12:1,121,793...1,131,291
JBrowse link
G TMPRSS2 transmembrane serine protease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:204,874,759...204,905,411
Ensembl chr13:204,876,561...204,902,561
JBrowse link
G TMPRSS4 transmembrane serine protease 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:45,400,263...45,436,936
Ensembl chr 9:45,400,464...45,435,916
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,729,333...51,743,256
Ensembl chr 2:51,733,180...51,743,256
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:5,782,133...5,790,628
Ensembl chr 9:5,782,200...5,791,577
JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:20,682,536...20,694,340
Ensembl chr 7:20,682,652...20,704,192
JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:95,154,230...95,197,308
Ensembl chr 4:95,154,358...95,197,305
JBrowse link
G ADARB1 adenosine deaminase RNA specific B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:207,746,915...207,791,809
Ensembl chr13:207,693,698...207,791,796
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,171,554...10,201,602
Ensembl chr 2:10,171,499...10,201,602
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:36,988,031...37,005,496
Ensembl chr  X:36,988,031...37,044,769
JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,659,456...10,716,210
Ensembl chr 3:10,669,828...10,708,523
JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:163,525,872...163,567,649
Ensembl chr 1:163,525,934...163,588,798
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chr16:68,390,879...68,451,605
Ensembl chr16:68,390,875...68,484,918
JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:22,727,865...22,866,905
Ensembl chr10:22,715,735...22,866,904
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,137,639...36,227,690
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:39,395,517...39,402,653
Ensembl chr13:39,395,541...39,402,650
JBrowse link
G PKN2 protein kinase N2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:127,579,097...127,709,982
Ensembl chr 4:127,573,703...127,709,943
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22479552) ARUK-UCL
Ensembl
PMID:22479552 GO_REF:0000107 NCBI chr 5:3,302,755...3,321,091
Ensembl chr 5:3,300,708...3,366,361
JBrowse link
G PPIA peptidylprolyl isomerase A involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chr18:50,563,130...50,566,857 JBrowse link
G PPID peptidylprolyl isomerase D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:47,656,269...47,702,805
Ensembl chr 8:47,656,273...47,702,748
JBrowse link
G PPIE peptidylprolyl isomerase E involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chr 6:95,548,582...95,566,470 JBrowse link
G PPIH peptidylprolyl isomerase H involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,741,999...168,760,350
Ensembl chr 6:168,742,005...168,760,289
JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:66,090,089...66,096,477
Ensembl chr 2:66,084,856...66,096,484
JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:31,645,753...31,701,305
Ensembl chr 7:31,645,755...31,701,405
JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:105,009,550...105,264,689
Ensembl chr 9:105,006,986...105,265,595
JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,804,959...50,903,155
Ensembl chr17:50,804,962...50,869,225
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:11641396) UniProt PMID:11641396 NCBI chr 5:18,718,588...18,723,843
Ensembl chr 5:18,718,158...18,723,843
JBrowse link
G TMEM39A transmembrane protein 39A involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:140,797,098...140,830,732
Ensembl chr13:140,797,205...140,831,277
JBrowse link
G TRIM38 tripartite motif containing 38 acts_upstream_of_or_within ISO (MGI:5441682|PMID:22539786) MGI PMID:22539786 MGI:5441682 NCBI chr 7:20,682,536...20,694,340
Ensembl chr 7:20,682,652...20,704,192
JBrowse link
G VAPB VAMP associated protein B and C involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:58,594,749...58,644,925
Ensembl chr17:58,594,749...58,644,918
JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in IMP (PMID:25593157) AgBase PMID:25593157 NCBI chr 1:111,588,721...111,635,064
Ensembl chr 1:111,588,306...111,635,064
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,245,802...49,277,917
Ensembl chr 6:49,245,673...49,277,914
JBrowse link
G CD209 CD209 molecule involved_in ISO (PMID:22673088) FlyBase PMID:22673088 NCBI chr 2:71,394,414...71,397,711
Ensembl chr 2:71,394,390...71,397,969
JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in ISO (PMID:22673088) FlyBase PMID:22673088 NCBI chr 2:71,433,406...71,436,570 JBrowse link
G KPNA2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chr12:14,283,092...14,296,749
Ensembl chr12:14,283,087...14,297,769
JBrowse link
G KPNA6 karyopherin subunit alpha 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28189564)
(MGI:5898166|PMID:28189564)
Ensembl
MGI
PMID:28189564 GO_REF:0000107 MGI:5898166 NCBI chr 6:88,611,128...88,656,281
Ensembl chr 6:88,611,462...88,656,278
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:129,811,540...129,829,395
Ensembl chr 1:129,811,539...129,828,991
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chr 6:17,657,792...17,669,560 JBrowse link
positive regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,102,155...63,105,032
Ensembl chr 6:63,102,156...63,104,943
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:168,534,950...168,569,574
Ensembl chr13:168,533,693...168,569,567
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,206,921...58,279,252
Ensembl chr 3:58,206,921...58,279,245
JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,285,422...37,334,103
Ensembl chr17:37,285,441...37,334,101
JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:54,860,481...54,895,229
Ensembl chr 4:54,859,930...54,895,193
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,171,554...10,201,602
Ensembl chr 2:10,171,499...10,201,602
JBrowse link
G TSG101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) UniProt PMID:11595185 PMID:15218037 NCBI chr 2:40,673,187...40,720,681 JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:29,963,087...29,994,650
Ensembl chr14:29,962,042...29,994,650
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chr 6:17,657,792...17,669,560 JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:158,233,039...158,273,533
Ensembl chr 1:158,233,051...158,270,679
JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:29,648,120...29,682,451
Ensembl chr18:29,649,992...29,682,465
JBrowse link
G CAV2 caveolin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:29,699,012...29,707,277
Ensembl chr18:29,699,020...29,707,277
JBrowse link
G CTSL cathepsin L involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:27,668,523...27,674,705
Ensembl chr10:27,668,264...27,674,618
JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:160,653,818...160,792,516
Ensembl chr 6:160,653,890...160,801,288
JBrowse link
G KIAA0319L KIAA0319 like acts_upstream_of_or_within ISO (MGI:5750797|PMID:26814968) MGI PMID:26814968 MGI:5750797 NCBI chr 6:91,630,664...91,747,790
Ensembl chr 6:91,605,502...91,747,773
JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:111,372,148...111,468,720
Ensembl chr15:111,372,173...111,467,919
JBrowse link
G TPCN2 two pore segment channel 2 involved_in ISO (PMID:32221306) UniProt PMID:32221306 NCBI chr 2:4,069,267...4,105,065 JBrowse link
receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:12,099,849...12,152,204
Ensembl chr  X:12,099,853...12,151,275
JBrowse link
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:78,848,797...78,880,733
Ensembl chr11:78,848,794...78,881,272
JBrowse link
G ICAM1 intercellular adhesion molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:69,097,136...69,107,722
Ensembl chr 2:69,097,122...69,108,205
JBrowse link
G LRRC15 leucine rich repeat containing 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:131,339,778...131,354,691
Ensembl chr13:131,343,940...131,345,685
JBrowse link
regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:69,932,646...69,935,861
Ensembl chr 8:69,932,643...69,935,861
JBrowse link
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNF8 SNF8 subunit of ESCRT-II involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:25,142,748...25,152,847
Ensembl chr12:25,136,232...25,153,016
JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:79,956,485...80,140,140
Ensembl chr 1:79,955,657...80,243,797
JBrowse link
G LOC100622028 tripartite motif-containing protein 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:4,197,922...4,204,688
Ensembl chr 9:4,197,922...4,204,664
JBrowse link
G LOC100738479 tripartite motif-containing protein 34 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:4,175,660...4,188,528 JBrowse link
G LOC106504368 butyrophilin subfamily 1 member A1-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:24,680,986...24,712,081 JBrowse link
G LOC733579 tripartite motif protein TRIM5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:4,157,290...4,170,233
Ensembl chr 9:4,157,290...4,170,204
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:51,317,386...51,358,665 JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:5,782,133...5,790,628
Ensembl chr 9:5,782,200...5,791,577
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr12:33,184,039...33,212,440
Ensembl chr12:33,184,044...33,212,398
JBrowse link
G TRIM27 tripartite motif containing 27 involved_in IBA (PMID:21873635) GO_Central PMID:21873635
G TRIM38 tripartite motif containing 38 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:20,682,536...20,694,340
Ensembl chr 7:20,682,652...20,704,192
JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:89,406,470...89,442,794
Ensembl chr 6:89,406,478...89,442,746
JBrowse link
G TRIM68 tripartite motif containing 68 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:5,502,931...5,516,936
Ensembl chr 9:5,502,988...5,510,779
JBrowse link
G TRIML1 tripartite motif family like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:7,284,392...7,290,639
Ensembl chr17:7,283,658...7,290,639
JBrowse link
G TRIML2 tripartite motif family like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:7,310,656...7,326,072
Ensembl chr17:7,311,209...7,325,103
JBrowse link
regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in ISO (MGI:3700400|PMID:16950491) UniProt PMID:16950491 MGI:3700400 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,288,544...158,518,879
JBrowse link
G DDX5 DEAD-box helicase 5 ISO RGD PMID:19224332 RGD:5128521 NCBI chr12:14,571,712...14,580,740
Ensembl chr12:14,571,310...14,601,576
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
G MIR378-1 microRNA mir-378-1 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr 2:150,825,865...150,825,944
Ensembl chr 2:150,825,865...150,825,944
JBrowse link
G PPIA peptidylprolyl isomerase A involved_in ISO (PMID:11250896) UniProt PMID:11250896 NCBI chr18:50,563,130...50,566,857 JBrowse link
regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMP3 lysosomal associated membrane protein 3 involved_in ISO (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chr13:121,081,717...121,117,660 JBrowse link
regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRIM25 tripartite motif containing 25 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr12:33,184,039...33,212,440
Ensembl chr12:33,184,044...33,212,398
JBrowse link
G TRIM31 tripartite motif containing 31 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 7:22,665,150...22,681,616 JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:89,406,470...89,442,794
Ensembl chr 6:89,406,478...89,442,746
JBrowse link
G TSG101 tumor susceptibility 101 NOT|involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chr 2:40,673,187...40,720,681 JBrowse link
single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within ISO (PMID:14963118) MGI PMID:14963118 NCBI chr14:49,874,981...49,906,043
Ensembl chr14:49,874,984...49,906,048
JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP4B charged multivesicular body protein 4B involved_in ISO (PMID:17701905) UniProt PMID:17701905 NCBI chr17:37,285,422...37,334,103
Ensembl chr17:37,285,441...37,334,101
JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:33,212,769...33,227,237
Ensembl chr10:33,212,766...33,227,405
JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:267,964,875...268,008,833
Ensembl chr 1:267,964,928...268,008,825
JBrowse link
G MVB12A multivesicular body subunit 12A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:60,271,020...60,275,972
Ensembl chr 2:60,271,026...60,275,971
JBrowse link
G MVB12B multivesicular body subunit 12B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:266,933,459...267,105,790
Ensembl chr 1:266,933,542...267,105,788
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of
involved_in
ISO
IEA
(PMID:15126635) BHF-UCL
Ensembl
PMID:15126635 GO_REF:0000107 NCBI chr 1:115,941,945...116,069,884
Ensembl chr 1:115,941,937...116,070,317
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (PMID:18641129) UniProt PMID:18641129 NCBI chr13:19,597,064...19,664,047
Ensembl chr13:19,597,108...19,698,270
JBrowse link
G TSG101 tumor susceptibility 101 involved_in ISO (PMID:15126635), (PMID:18005716)
(MGI:3850622|PMID:15256501)
BHF-UCL
UniProt
PMID:15126635 PMID:15256501 PMID:18005716 MGI:3850622 NCBI chr 2:40,673,187...40,720,681 JBrowse link
G VTA1 vesicle trafficking 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:22,862,628...22,923,861
Ensembl chr 1:22,859,390...22,923,839
JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP2A charged multivesicular body protein 2A involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr 6:63,102,155...63,105,032
Ensembl chr 6:63,102,156...63,104,943
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr 3:58,206,921...58,279,252
Ensembl chr 3:58,206,921...58,279,245
JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr17:37,285,422...37,334,103
Ensembl chr17:37,285,441...37,334,101
JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr 4:54,860,481...54,895,229
Ensembl chr 4:54,859,930...54,895,193
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:16193069), (PMID:17940959) UniProt PMID:16193069 PMID:17940959 NCBI chr 6:17,657,792...17,669,560 JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in ISO (PMID:14505570), (PMID:16193069), (PMID:17940959) UniProt PMID:14505570 PMID:16193069 PMID:17940959 NCBI chr 1:158,233,039...158,273,533
Ensembl chr 1:158,233,051...158,270,679
JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP1B charged multivesicular body protein 1B involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chr 6:97,356,924...97,359,613 JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,102,155...63,105,032
Ensembl chr 6:63,102,156...63,104,943
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:168,534,950...168,569,574
Ensembl chr13:168,533,693...168,569,567
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,206,921...58,279,252
Ensembl chr 3:58,206,921...58,279,245
JBrowse link
G CHMP4A charged multivesicular body protein 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,089,092...75,093,796
Ensembl chr 7:75,088,271...75,097,761
JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,285,422...37,334,103
Ensembl chr17:37,285,441...37,334,101
JBrowse link
G CHMP6 charged multivesicular body protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,691,821...1,698,347
Ensembl chr12:1,691,821...1,698,305
JBrowse link
G MITD1 microtubule interacting and trafficking domain containing 1 NOT|involved_in ISO (PMID:23045692) UniProt PMID:23045692 NCBI chr 3:55,054,475...55,078,180
Ensembl chr 3:55,054,516...55,069,867
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:19,597,064...19,664,047
Ensembl chr13:19,597,108...19,698,270
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:24107264) UniProt PMID:24107264 NCBI chr 6:17,657,792...17,669,560 JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:158,233,039...158,273,533
Ensembl chr 1:158,233,051...158,270,679
JBrowse link
viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:12,099,849...12,152,204
Ensembl chr  X:12,099,853...12,151,275
JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:88,934,873...88,980,317
Ensembl chr13:88,934,868...88,983,131
JBrowse link
G ANPEP alanyl aminopeptidase, membrane involved_in IEA GOC GO_REF:0000108 NCBI chr 7:55,351,081...55,373,856
Ensembl chr 7:55,351,083...55,373,881
JBrowse link
G AVP arginine vasopressin involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:32,581,234...32,583,145
Ensembl chr17:32,581,230...32,583,427
JBrowse link
G AVPR1B arginine vasopressin receptor 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:66,769,472...66,776,916
Ensembl chr 9:66,772,591...66,776,931
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,245,802...49,277,917
Ensembl chr 6:49,245,673...49,277,914
JBrowse link
G CD163 CD163 molecule involved_in IEA GOC GO_REF:0000108 NCBI chr 5:63,300,200...63,334,497
Ensembl chr 5:63,300,146...63,334,498
JBrowse link
G CD209 CD209 molecule involved_in ISO (PMID:24623090) FlyBase PMID:24623090 NCBI chr 2:71,394,414...71,397,711
Ensembl chr 2:71,394,390...71,397,969
JBrowse link
G CD81 CD81 molecule involved_in IEA GOC GO_REF:0000108 NCBI chr 2:1,625,728...1,641,662
Ensembl chr 2:1,506,652...1,641,667
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:49235|PMID:1719235) MGI PMID:1719235 MGI:49235 NCBI chr 6:49,437,308...49,460,614 JBrowse link
G CLDN1 claudin 1 involved_in IEA GOC GO_REF:0000108 NCBI chr13:127,714,857...127,730,628
Ensembl chr13:127,712,767...127,730,657
JBrowse link
G CLDN6 claudin 6 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:39,168,506...39,172,631
Ensembl chr 3:39,167,853...39,172,629
JBrowse link
G CLDN9 claudin 9 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:39,172,731...39,181,827
Ensembl chr 3:39,172,853...39,174,354
JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in ISO (PMID:16051304), (PMID:24623090) FlyBase PMID:16051304 PMID:24623090 NCBI chr 2:71,433,406...71,436,570 JBrowse link
G CLEC5A C-type lectin domain containing 5A involved_in IEA GOC GO_REF:0000108 NCBI chr18:8,004,423...8,014,390
Ensembl chr18:8,004,448...8,016,318
JBrowse link
G CTSB cathepsin B involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:15,014,139...15,035,081
Ensembl chr14:15,011,711...15,034,737
JBrowse link
G CTSL cathepsin L involved_in ISO (PMID:16339146), (PMID:18562523), (PMID:26953343), (PMID:32855215) UniProt PMID:16339146 PMID:18562523 PMID:26953343 PMID:32855215 NCBI chr10:27,668,523...27,674,705
Ensembl chr10:27,668,264...27,674,618
JBrowse link
G DAG1 dystroglycan 1 involved_in IEA GOC GO_REF:0000108 NCBI chr13:32,028,019...32,092,450
Ensembl chr13:32,029,329...32,092,453
JBrowse link
G DPP4 dipeptidyl peptidase 4 involved_in IEA GOC GO_REF:0000108 NCBI chr15:68,661,764...68,742,961
Ensembl chr15:68,660,849...68,743,818
JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) CACAO PMID:20202662 NCBI chr 6:160,653,818...160,792,516
Ensembl chr 6:160,653,890...160,801,288
JBrowse link
G GAS6 growth arrest specific 6 involved_in ISO (PMID:21501828) UniProt PMID:21501828 NCBI chr11:78,848,797...78,880,733
Ensembl chr11:78,848,794...78,881,272
JBrowse link
G GPR15 G protein-coupled receptor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:160,386,727...160,390,965
Ensembl chr13:160,385,646...160,391,028
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,209,435...5,227,543
Ensembl chr 2:5,209,436...5,227,748
JBrowse link
G HAVCR1 hepatitis A virus cellular receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr16:66,162,318...66,208,868 JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr13:32,798,135...32,800,705
Ensembl chr13:32,793,569...32,800,796
JBrowse link
G HYAL2 hyaluronidase 2 involved_in ISS
ISO
facilitates UniProt
RGD
PMID:12584308 GO_REF:0000024 RGD:633153 NCBI chr13:32,805,220...32,813,684
Ensembl chr13:32,805,223...32,815,335
JBrowse link
G ITGAV integrin subunit alpha V involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:91,604,666...91,711,843
Ensembl chr15:91,604,676...91,711,840
JBrowse link
G ITGB3 integrin subunit beta 3 involved_in ISO (PMID:25063885) UniProt PMID:25063885 NCBI chr12:16,694,466...16,752,228
Ensembl chr12:16,693,505...16,752,292
JBrowse link
G ITGB6 integrin subunit beta 6 involved_in IEA GOC GO_REF:0000108 NCBI chr15:67,041,516...67,175,409
Ensembl chr15:67,041,519...67,175,234
JBrowse link
G LAMP3 lysosomal associated membrane protein 3 NOT|involved_in ISO (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chr13:121,081,717...121,117,660 JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 ISO RGD PMID:12584355 RGD:1599797 NCBI chr 9:46,823,552...46,891,564
Ensembl chr 9:46,789,726...46,891,233
JBrowse link
G NECTIN4 nectin cell adhesion molecule 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:89,356,935...89,374,358
Ensembl chr 4:89,355,407...89,374,358
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:108,403,126...108,450,486
Ensembl chr 6:108,402,877...108,450,990
JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,280,673...56,430,832
Ensembl chr10:56,280,363...56,430,777
JBrowse link
G PHB prohibitin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:25,596,520...25,609,693
Ensembl chr12:25,584,443...25,609,656
JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr13:86,836,288...86,869,569
Ensembl chr13:86,649,586...86,869,297
JBrowse link
G RPSA ribosomal protein SA involved_in IEA GOC GO_REF:0000108 NCBI chr13:24,072,551...24,081,536
Ensembl chr13:24,072,527...24,083,686
JBrowse link
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in IMP (PMID:12857889) AgBase PMID:12857889 NCBI chr17:31,994,505...32,021,239
Ensembl chr17:31,994,540...32,021,466
JBrowse link
G SIVA1 SIVA1 apoptosis inducing factor involved_in IEA GOC GO_REF:0000108
G SLC3A2 solute carrier family 3 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:8,892,071...8,919,070
Ensembl chr 2:8,892,089...8,919,072
JBrowse link
G SLC52A2 solute carrier family 52 member 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:421,457...429,360 JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:3,324,091...3,328,493
Ensembl chr 9:3,324,091...3,328,373
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr 1:129,811,540...129,829,395
Ensembl chr 1:129,811,539...129,828,991
JBrowse link
G UVRAG UV radiation resistance associated involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5552992|PMID:24550300) Ensembl
MGI
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr 9:10,088,779...10,370,857
Ensembl chr 9:10,088,798...10,369,037
JBrowse link
G VAMP8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:24550300) MGI PMID:24550300 NCBI chr 3:59,187,900...59,193,165 JBrowse link
G VPS16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr17:32,803,596...32,825,974
Ensembl chr17:32,803,412...32,825,950
JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5552992|PMID:24550300) Ensembl
MGI
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr 1:130,409,121...130,420,467
Ensembl chr 1:130,409,122...130,420,450
JBrowse link
G XPR1 xenotropic and polytropic retrovirus receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 9:122,237,954...122,461,669
Ensembl chr 9:122,237,957...122,460,535
JBrowse link
G ZNF639 zinc finger protein 639 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:117,370,496...117,384,046
Ensembl chr13:117,370,543...117,386,268
JBrowse link
viral exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ADP ribosylation factor like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:61,640,619...61,696,819
Ensembl chr13:61,640,659...61,720,719
JBrowse link
viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:78,848,797...78,880,733
Ensembl chr11:78,848,794...78,881,272
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,209,435...5,227,543
Ensembl chr 2:5,209,436...5,227,748
JBrowse link
G KPNA6 karyopherin subunit alpha 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5898166|PMID:28189564) Ensembl
MGI
PMID:28189564 GO_REF:0000107 MGI:5898166 NCBI chr 6:88,611,128...88,656,281
Ensembl chr 6:88,611,462...88,656,278
JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,796,446...235,876,321
JBrowse link
viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IST1 IST1 factor associated with ESCRT-III involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:14,868,859...14,910,679
Ensembl chr 6:14,836,749...14,911,313
JBrowse link
G RAB7A RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:71,777,422...71,886,758
Ensembl chr13:71,777,420...71,886,581
JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:158,233,039...158,273,533
Ensembl chr 1:158,233,051...158,270,679
JBrowse link
viral replication complex formation and maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PI4KA phosphatidylinositol 4-kinase alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:50,390,416...50,491,983
Ensembl chr14:50,390,408...50,491,950
JBrowse link
viral RNA genome packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX6 DEAD-box helicase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:46,025,616...46,063,836
Ensembl chr 9:46,025,445...46,063,814
JBrowse link
G PC pyruvate carboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,430...5,587,797
JBrowse link
viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC42 cell division cycle 42 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:80,035,034...80,089,243
Ensembl chr 6:80,035,122...80,089,233
JBrowse link
G EEA1 early endosome antigen 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:90,131,707...90,257,014
Ensembl chr 5:90,168,242...90,257,248
JBrowse link
G PCBP1 poly(rC) binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:72,378,643...72,380,364
Ensembl chr 3:72,378,648...72,380,362
JBrowse link
G PCBP2 poly(rC) binding protein 2 involved_in ISO (PMID:12414943) UniProt PMID:12414943 NCBI chr 5:18,670,124...18,703,745
Ensembl chr 5:18,673,981...18,706,838
JBrowse link
G PI4KA phosphatidylinositol 4-kinase alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:50,390,416...50,491,983
Ensembl chr14:50,390,408...50,491,950
JBrowse link
G PIK3C2G phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chr 5:54,474,623...54,849,520
Ensembl chr 5:54,474,624...54,849,512
JBrowse link
G RAB29 RAB29, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:66,448,854...66,458,766
Ensembl chr 9:66,445,843...66,483,838
JBrowse link
G RAB5A RAB5A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:6,905,302...6,940,165
Ensembl chr13:6,905,348...6,941,553
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,353,119...125,491,963
JBrowse link
virion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,259...51,377,794
JBrowse link
G RAB1A RAB1A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:76,837,673...76,868,156
Ensembl chr 3:76,837,430...76,869,778
JBrowse link
G RAB1B RAB1B, member RAS oncogene family NOT|involved_in ISO (PMID:21680502) UniProt PMID:21680502 NCBI chr 2:6,110,438...6,116,443
Ensembl chr 2:6,102,353...6,126,951
JBrowse link
G RAB43 RAB43, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:71,564,250...71,596,318
Ensembl chr13:71,562,350...71,596,249
JBrowse link
G SPCS1 signal peptidase complex subunit 1 involved_in ISO (PMID:24009510), (PMID:29593046) UniProt PMID:24009510 PMID:29593046 NCBI chr13:34,839,921...34,841,605
Ensembl chr13:34,839,383...34,841,605
JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:34,760,379...34,778,301
Ensembl chr17:34,760,379...34,779,251
JBrowse link
G USP6NL USP6 N-terminal like involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:60,193,505...60,398,399
Ensembl chr10:60,240,912...60,396,617
JBrowse link
virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSP90AB1 heat shock protein 90 alpha family class B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:39,237,299...39,250,479
Ensembl chr 7:39,244,458...39,254,002
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:46,823,552...46,891,564
Ensembl chr 9:46,789,726...46,891,233
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:51,317,386...51,358,665 JBrowse link
virus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MVB12A multivesicular body subunit 12A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:60,271,020...60,275,972
Ensembl chr 2:60,271,026...60,275,971
JBrowse link
G MVB12B multivesicular body subunit 12B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:266,933,459...267,105,790
Ensembl chr 1:266,933,542...267,105,788
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16534
    viral process 325
      viral life cycle 244
        intracellular transport of virus + 7
        negative regulation of viral life cycle + 31
        positive regulation of viral life cycle + 35
        regulation of viral life cycle + 142
        viral entry into host cell + 99
        viral genome integration into host DNA 0
        viral genome replication + 109
        viral release from host cell + 35
        virion assembly + 30
        virion attachment to host cell + 7
        virus maturation + 2
paths to the root