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ONTOLOGY REPORT - ANNOTATIONS


Term:viral life cycle
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Accession:GO:0019058 term browser browse the term
Definition:A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.
Synonyms:narrow_synonym: viral assembly, maturation, egress, and release
 related_synonym: lytic viral life cycle;   viral infectious cycle;   viral replication
 alt_id: GO:0019067


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viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FURIN furin, paired basic amino acid cleaving enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:53,357,491...53,368,285
Ensembl chr 3:53,358,045...53,365,423
JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:82,088,090...82,506,131
Ensembl chr 1:82,090,664...82,555,145
JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:17,636,143...17,667,791
Ensembl chr24:17,636,026...17,666,854
JBrowse link
coreceptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:110,543,140...110,569,168
Ensembl chr 1:110,543,247...110,569,143
JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KPNA2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chr 9:12,546,912...12,556,163 JBrowse link
G KPNA6 karyopherin subunit alpha 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28189564)
(MGI:5898166|PMID:28189564)
Ensembl
MGI
PMID:28189564 GO_REF:0000107 MGI:5898166 NCBI chr 2:69,025,409...69,078,635
Ensembl chr 2:69,030,228...69,077,912
JBrowse link
fusion of virus membrane with host endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL3 cathepsin L family member 3 involved_in ISO (PMID:16081529), (PMID:18562523) UniProt PMID:16081529 PMID:18562523 NCBI chr 1:72,215,774...72,219,093 JBrowse link
fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL3 cathepsin L family member 3 involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 1:72,215,774...72,219,093 JBrowse link
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:60,975,196...61,005,869
Ensembl chr22:60,974,849...61,005,875
JBrowse link
G HYAL2 hyaluronidase 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr20:39,029,426...39,034,451
Ensembl chr20:39,031,735...39,034,130
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:110,543,140...110,569,168
Ensembl chr 1:110,543,247...110,569,143
JBrowse link
intracellular transport of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 involved_in ISO (PMID:25540360) AgBase PMID:25540360 NCBI chr14:20,967,936...21,279,044
Ensembl chr14:20,968,011...21,278,363
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXL2 F-box and leucine rich repeat protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:3,498,253...3,606,016
Ensembl chr23:3,498,979...3,607,093
JBrowse link
G FMR1 FMRP translational regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439
JBrowse link
G PHB prohibitin involved_in ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chr 9:25,525,711...25,536,722
Ensembl chr 9:25,526,649...25,536,722
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 C-C motif chemokine ligand 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:38,949,184...38,950,702
Ensembl chr 9:38,948,184...38,950,803
JBrowse link
G CCNK cyclin K involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:67,910,772...67,927,216
Ensembl chr 8:67,901,426...67,945,214
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chr 1:111,902,429...111,919,191
Ensembl chr 1:111,745,413...111,917,830
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:35,759,367...35,789,759
Ensembl chr  X:35,759,416...35,789,774
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chr30:7,144,727...7,248,014
Ensembl chr30:7,144,570...7,248,000
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764
JBrowse link
G VAPA VAMP associated protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,844,927...75,891,811
Ensembl chr 7:75,845,000...75,889,076
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
G ZBED1 zinc finger BED-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:1,299,710...1,303,155
Ensembl chr  X:1,300,940...1,303,033
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:4,972,369...4,984,218
Ensembl chr15:4,972,956...4,980,371
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST2 bone marrow stromal cell antigen 2 involved_in ISO (PMID:19036818), (PMID:20686043), (PMID:20943977)
(MGI:5437427|PMID:20686043)
(MGI:5437405|PMID:22284121), (MGI:5448513|PMID:21919738)
UniProt PMID:19036818 PMID:20686043 PMID:20943977 PMID:21919738 PMID:22284121 MGI:5437405 MGI:5437427 MGI:5448513 NCBI chr20:45,383,757...45,387,420
Ensembl chr20:45,383,915...45,387,178
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in ISO (PMID:20167191) AgBase PMID:20167191 NCBI chr31:35,898,206...35,929,802
Ensembl chr31:35,860,590...35,951,350
JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:37,064,107...37,073,791
Ensembl chr27:37,064,080...37,073,789
JBrowse link
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808
JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in ISO (PMID:17005673) UniProt PMID:17005673 NCBI chr10:8,348,101...8,491,435 JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:45,660,445...45,680,407
Ensembl chr 9:45,660,446...45,680,363
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:23,951,704...23,993,620
Ensembl chr26:23,953,130...23,992,431
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:18,392,706...18,443,241
Ensembl chr25:18,392,409...18,443,241
JBrowse link
G RESF1 retroelement silencing factor 1 involved_in ISO (MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:6271895 NCBI chr27:16,829,611...16,856,960
Ensembl chr27:16,829,968...16,839,166
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (MGI:5440670|PMID:20164836), (MGI:6271895|PMID:29728365) UniProt PMID:20164836 PMID:29728365 MGI:5440670 MGI:6271895 NCBI chr17:60,035,819...60,069,721
Ensembl chr17:60,037,379...60,069,551
JBrowse link
G TASOR transcription activation suppressor involved_in ISO (PMID:29211708) UniProt PMID:29211708 NCBI chr20:33,665,231...33,713,264
Ensembl chr20:33,646,000...33,712,936
JBrowse link
G TRIM28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within
ISO (MGI:5440670|PMID:20164836)
(MGI:3842857|PMID:19270682)
UniProt
MGI
PMID:19270682 PMID:20164836 MGI:3842857 MGI:5440670 NCBI chr 1:99,408,920...99,415,432
Ensembl chr 1:99,408,925...99,415,146
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD74 CD74 molecule involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 4:58,689,745...58,698,421
Ensembl chr 4:58,689,752...58,698,151
JBrowse link
G CIITA class II major histocompatibility complex transactivator involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 6:31,774,486...31,837,025
Ensembl chr 6:31,774,609...31,836,820
JBrowse link
G FCN2 ficolin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:50,868,942...50,876,001
Ensembl chr 9:50,868,973...50,875,792
JBrowse link
G FCN3 ficolin 3 involved_in ISO (PMID:22851708) UniProt PMID:22851708
G GSN gelsolin involved_in ISO (PMID:23575248) UniProt PMID:23575248 NCBI chr11:74,248,227...74,268,129
Ensembl chr11:74,233,457...74,268,129
JBrowse link
G LOC475935 interferon-induced transmembrane protein 1-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:25,484,731...25,485,927 JBrowse link
G LOC483397 interferon-induced transmembrane protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5780029|PMID:25738301)
GO_Central
MGI
PMID:21873635 PMID:25738301 MGI:5780029 NCBI chr18:25,494,018...25,495,114 JBrowse link
G LY6E lymphocyte antigen 6 family member E involved_in ISO (PMID:32641482), (PMID:32704094)
(MGI:6448667|PMID:32704094)
UniProt PMID:32641482 PMID:32704094 MGI:6448667 NCBI chr13:36,926,776...36,930,265
Ensembl chr13:36,925,980...36,974,979
JBrowse link
G MID2 midline 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:81,267,037...81,467,613
Ensembl chr  X:81,296,249...81,463,210
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr21:6,448,909...6,528,185
Ensembl chr21:6,449,822...6,527,119
JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563
JBrowse link
G PTX3 pentraxin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:50,952,835...50,958,607
Ensembl chr23:50,952,885...50,958,167
JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr11:20,836,863...20,928,930
Ensembl chr11:20,836,879...20,928,819
JBrowse link
G SNX3 sorting nexin 3 involved_in ISO (PMID:18767904) UniProt PMID:18767904 NCBI chr12:65,252,175...65,294,620
Ensembl chr12:65,252,175...65,294,611
JBrowse link
G TRIM10 tripartite motif containing 10 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr35:26,349,624...26,357,002
Ensembl chr35:26,350,125...26,356,592
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:640,375...647,427 JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,703,628...31,725,674
Ensembl chr 9:31,707,034...31,725,762
JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 6:8,744,970...8,752,896
Ensembl chr 6:8,749,438...8,751,753
JBrowse link
G TRIM59 tripartite motif containing 59 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:26,495,628...26,509,445
Ensembl chr34:26,497,607...26,498,821
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,124,310...15,138,660
Ensembl chr28:15,123,348...15,146,355
JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific acts_upstream_of_or_within ISO (MGI:4939544|PMID:21173229) MGI PMID:21173229 MGI:4939544 NCBI chr 7:42,762,021...42,785,192
Ensembl chr 7:42,748,136...42,782,999
JBrowse link
G APOBEC3Z1 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z1 involved_in ISO (PMID:16527742) UniProt PMID:16527742
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 involved_in ISO (MGI:5486557|PMID:16378963) UniProt PMID:16378963 MGI:5486557 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808
JBrowse link
G BANF1 BAF nuclear assembly factor 1 involved_in ISO (PMID:18005698) UniProt PMID:18005698 NCBI chr18:51,269,817...51,271,484
Ensembl chr18:51,269,815...51,271,690
JBrowse link
G BST2 bone marrow stromal cell antigen 2 involved_in ISO (PMID:20943977)
(MGI:5437405|PMID:22284121), (MGI:5448513|PMID:21919738)
UniProt PMID:20943977 PMID:21919738 PMID:22284121 MGI:5437405 MGI:5448513 NCBI chr20:45,383,757...45,387,420
Ensembl chr20:45,383,915...45,387,178
JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10490959) BHF-UCL PMID:10490959 NCBI chr 9:37,817,409...37,823,852
Ensembl chr 9:37,817,305...37,823,852
JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,494,641...29,537,933
Ensembl chr17:29,496,128...29,537,933
JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in ISO (PMID:23093934) UniProt PMID:23093934 NCBI chr18:37,584,326...37,595,316 JBrowse link
G IFIH1 interferon induced with helicase C domain 1 involved_in ISO (PMID:33727702) UniProt PMID:33727702 NCBI chr36:7,668,925...7,727,040
Ensembl chr36:7,649,727...8,261,048
JBrowse link
G IFIT5 interferon induced protein with tetratricopeptide repeats 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:4,318,616...4,329,811
Ensembl chr28:4,318,732...4,328,785
JBrowse link
G IFNB1 interferon beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:40,668,295...40,668,855
Ensembl chr11:40,668,295...40,668,855
JBrowse link
G ILF3 interleukin enhancer binding factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,511,915...50,544,234
Ensembl chr20:50,515,334...50,544,184
JBrowse link
G ISG15 ISG15 ubiquitin like modifier involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:56,230,879...56,237,354
Ensembl chr 5:56,236,318...56,404,695
JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:51,822,642...51,833,665
Ensembl chr 3:51,822,888...51,833,659
JBrowse link
G LOC100688853 phospholipid scramblase 1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:41,591,425...41,625,918
Ensembl chr23:41,599,843...41,669,112
JBrowse link
G LOC475935 interferon-induced transmembrane protein 1-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:25,484,731...25,485,927 JBrowse link
G LOC477518 oligoadenylate synthetase-like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:16,855,386...16,869,102
Ensembl chr26:16,855,386...16,869,102
JBrowse link
G LOC483397 interferon-induced transmembrane protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:25,494,018...25,495,114 JBrowse link
G LOC488622 myeloid cell nuclear differentiation antigen involved_in ISO (PMID:22291595) UniProt PMID:22291595 NCBI chr38:22,874,345...22,892,362 JBrowse link
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:125,675...133,304
Ensembl chr 4:84,720...132,981
JBrowse link
G LTF lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:42,231,994...42,263,202
Ensembl chr20:42,231,994...42,263,202
JBrowse link
G MAVS mitochondrial antiviral signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:17,510,209...17,529,286
Ensembl chr24:17,512,761...17,523,807
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in ISO (PMID:24500530)
(PMID:14687945), (PMID:15047845), (PMID:16202617)
AgBase
UniProt
PMID:14687945 PMID:15047845 PMID:16202617 PMID:24500530 NCBI chr31:35,898,206...35,929,802
Ensembl chr31:35,860,590...35,951,350
JBrowse link
G N4BP1 NEDD4 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:66,544,665...66,565,858
Ensembl chr 2:66,544,677...66,561,560
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:10,385,393...10,396,734
Ensembl chr26:10,385,447...10,396,733
JBrowse link
G OAS2 2'-5'-oligoadenylate synthetase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:10,431,881...10,450,085
Ensembl chr26:10,432,042...10,449,009
JBrowse link
G OAS3 2'-5'-oligoadenylate synthetase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:10,404,548...10,423,039
Ensembl chr26:10,404,414...10,423,039
JBrowse link
G OASL 2'-5'-oligoadenylate synthetase like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:16,837,376...16,850,388
Ensembl chr26:16,837,376...16,850,388
JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:41,639,938...41,668,972
Ensembl chr23:41,599,843...41,669,112
JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:11,996,282...12,047,693
Ensembl chr 7:11,996,703...12,044,036
JBrowse link
G RNASEL ribonuclease L involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:15,978,055...16,001,604
Ensembl chr 7:15,856,151...16,001,569
JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:4,488,202...4,508,705
Ensembl chr17:4,487,957...4,507,181
JBrowse link
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,961,557...50,966,261
Ensembl chr20:50,961,551...50,965,961
JBrowse link
G SLPI secretory leukocyte peptidase inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,566,030...32,568,406
Ensembl chr24:32,566,026...32,568,420
JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,941,292...5,029,580
Ensembl chr12:4,917,297...5,030,255
JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:14,991,187...15,243,124
Ensembl chr18:14,999,422...15,236,393
JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425
JBrowse link
G TRIM6 tripartite motif containing 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:28,595,887...28,611,562
Ensembl chr21:28,595,448...28,611,124
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:9,598,339...9,660,540
Ensembl chr16:9,598,405...9,664,569
JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 involved_in ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr10:28,744,404...28,751,544
Ensembl chr10:28,743,795...28,751,773
JBrowse link
G IL32 interleukin 32 acts_upstream_of ISO (PMID:23729669) ARUK-UCL PMID:23729669 NCBI chr 6:38,119,287...38,122,979 JBrowse link
G LOC403581 peptidylprolyl isomerase A (cyclophilin A) pseudogene involved_in ISO (PMID:19207730), (PMID:22347431) UniProt PMID:19207730 PMID:22347431 NCBI chr 7:80,937,433...80,938,175 JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP3 charged multivesicular body protein 3 involved_in ISO (PMID:16740483) UniProt PMID:16740483 NCBI chr17:38,600,793...38,658,368 JBrowse link
G MID2 midline 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:81,267,037...81,467,613
Ensembl chr  X:81,296,249...81,463,210
JBrowse link
G PML PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:37,232,337...37,278,434
Ensembl chr30:37,232,306...37,277,741
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:640,375...647,427 JBrowse link
G TRIM13 tripartite motif containing 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:1,877,672...1,893,097
Ensembl chr22:1,871,181...1,910,055
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:31,703,628...31,725,674
Ensembl chr 9:31,707,034...31,725,762
JBrowse link
G TRIM27 tripartite motif containing 27 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr35:25,904,381...25,922,531
Ensembl chr35:25,905,396...25,923,336
JBrowse link
G TRIM28 tripartite motif containing 28 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:99,408,920...99,415,432
Ensembl chr 1:99,408,925...99,415,146
JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:70,453,130...70,465,030
Ensembl chr11:70,462,007...70,463,974
JBrowse link
G TRIM35 tripartite motif containing 35 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:30,276,673...30,307,059
Ensembl chr25:30,276,763...30,300,769
JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 6:8,744,970...8,752,896
Ensembl chr 6:8,749,438...8,751,753
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,124,310...15,138,660
Ensembl chr28:15,123,348...15,146,355
JBrowse link
negative stranded viral RNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG16L1 autophagy related 16 like 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:5552992|PMID:24550300)
GO_Central
MGI
Ensembl
PMID:21873635 PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr25:44,761,034...44,800,033
Ensembl chr25:44,761,185...44,798,672
JBrowse link
G ATG16L2 autophagy related 16 like 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:5552992|PMID:24550300)
GO_Central
MGI
Ensembl
PMID:21873635 PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr21:25,404,667...25,433,456
Ensembl chr21:25,405,694...25,419,896
JBrowse link
G ATG5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5552992|PMID:24550300) Ensembl
MGI
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr12:63,565,859...63,692,383
Ensembl chr12:63,567,568...63,683,485
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr20:6,916,354...7,154,849
Ensembl chr20:6,916,515...7,154,800
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,157,109...2,188,543
Ensembl chr38:2,160,233...2,170,560
JBrowse link
G PPIB peptidylprolyl isomerase B involved_in ISO (PMID:15989969) AgBase PMID:15989969 NCBI chr30:28,654,193...28,660,129
Ensembl chr30:28,654,200...28,788,801
JBrowse link
G STOM stomatin involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:74,270,409...74,284,277
Ensembl chr11:74,270,409...74,284,670
JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:20,400,647...20,419,652
Ensembl chr24:20,400,791...20,419,655
JBrowse link
G VAPA VAMP associated protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,844,927...75,891,811
Ensembl chr 7:75,845,000...75,889,076
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
G YTHDC2 YTH domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:3,537,571...3,613,455
Ensembl chr11:3,536,854...3,612,282
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV2 caveolin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:55,437,622...55,445,481
Ensembl chr14:55,437,622...55,445,469
JBrowse link
G PC pyruvate carboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,406,994...50,507,677
Ensembl chr18:50,412,272...50,507,669
JBrowse link
G VAPA VAMP associated protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,844,927...75,891,811
Ensembl chr 7:75,845,000...75,889,076
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
G ZNF501 zinc finger protein 501 involved_in ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr20:43,542,093...43,553,933 JBrowse link
G ZNF502 zinc finger protein 502 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:43,556,653...43,568,540
Ensembl chr20:43,553,434...43,568,524
Ensembl chr20:43,553,434...43,568,524
JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMR1 FMRP translational regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:116,249,079...116,287,008
Ensembl chr  X:116,249,142...116,321,439
JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOP2A DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,207,501...22,237,497
Ensembl chr 9:22,207,638...22,237,496
JBrowse link
G TOP2B DNA topoisomerase II beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:18,159,521...18,206,413
Ensembl chr23:18,146,095...18,206,287
JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSG101 tumor susceptibility 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:40,910,870...40,952,922
Ensembl chr21:40,910,874...40,952,808
JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:6,594,981...6,621,902
Ensembl chr26:6,595,030...6,620,408
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chr 5:80,327,059...80,340,380 JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSG basigin involved_in ISO (PMID:11353871), (PMID:15688292)
(PMID:29739904)
UniProt PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr20:57,942,703...57,951,089
Ensembl chr20:57,943,276...57,951,061
JBrowse link
G CD4 CD4 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:38,204,003...38,250,771
Ensembl chr27:38,204,003...38,250,771
JBrowse link
G CD74 CD74 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:58,689,745...58,698,421
Ensembl chr 4:58,689,752...58,698,151
JBrowse link
G HLA-DRB1 MHC class II DLA DRB1 beta chain involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chr12:2,151,409...2,164,564 JBrowse link
G LGALS1 galectin 1 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr10:26,932,351...26,935,580
Ensembl chr10:26,932,301...26,935,646
JBrowse link
G LGALS9 galectin 9 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr 9:42,154,613...42,170,423
Ensembl chr 9:42,154,702...42,170,391
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) AgBase PMID:11277703 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:427,827...436,880
Ensembl chr 9:427,830...436,064
JBrowse link
G TMPRSS2 transmembrane serine protease 2 involved_in ISO (PMID:21068237), (PMID:24227843), (PMID:32404436) UniProt PMID:21068237 PMID:24227843 PMID:32404436 NCBI chr31:35,933,082...35,968,732 JBrowse link
G TMPRSS4 transmembrane serine protease 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,575,068...15,609,819
Ensembl chr 5:15,575,338...15,610,190
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:640,375...647,427 JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725
JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:23,894,521...23,939,392
Ensembl chr35:23,926,287...23,939,466
JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:42,762,021...42,785,192
Ensembl chr 7:42,748,136...42,782,999
JBrowse link
G ADARB1 adenosine deaminase RNA specific B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:38,715,529...38,799,353
Ensembl chr31:38,678,184...38,796,521
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:40,554,214...40,571,841
Ensembl chr16:40,555,565...40,571,720
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:55,064,720...55,097,623
Ensembl chr18:55,064,729...55,097,627
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:35,759,367...35,789,759
Ensembl chr  X:35,759,416...35,789,774
JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,836,043...6,868,268
Ensembl chr 6:6,836,086...6,868,818
JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:29,880,567...29,920,932
Ensembl chr30:29,880,419...29,920,332
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chr 4:54,991,528...55,045,976
Ensembl chr 4:54,994,227...55,017,098
JBrowse link
G LOC403581 peptidylprolyl isomerase A (cyclophilin A) pseudogene involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chr 7:80,937,433...80,938,175 JBrowse link
G LOC488947 interferon-induced protein with tetratricopeptide repeats 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:125,675...133,304
Ensembl chr 4:84,720...132,981
JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,925,915...3,062,118
Ensembl chr 7:2,927,326...3,062,348
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chr13:2,563,698...2,580,610
Ensembl chr13:2,564,065...2,580,368
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,884,819...32,890,995
Ensembl chr20:32,886,972...32,890,890
JBrowse link
G PKN2 protein kinase N2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:59,556,668...59,638,626
Ensembl chr 6:59,559,124...59,709,926
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22479552) ARUK-UCL
Ensembl
PMID:22479552 GO_REF:0000107 NCBI chr10:19,934,020...20,006,096
Ensembl chr10:19,934,165...20,006,146
JBrowse link
G PPID peptidylprolyl isomerase D involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:55,781,284...55,794,951
Ensembl chr15:55,781,508...55,794,921
JBrowse link
G PPIE peptidylprolyl isomerase E involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:3,156,067...3,173,028
Ensembl chr15:3,153,628...3,172,988
JBrowse link
G PPIH peptidylprolyl isomerase H involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:671,323...689,627
Ensembl chr15:671,324...689,544
JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:49,244,330...49,250,058
Ensembl chr20:49,241,358...49,250,039
JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:4,941,292...5,029,580
Ensembl chr12:4,917,297...5,030,255
JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:14,991,187...15,243,124
Ensembl chr18:14,999,422...15,236,393
JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:35,816,224...35,868,791
Ensembl chr24:35,817,664...35,860,021
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:11641396) UniProt PMID:11641396 NCBI chr27:1,715,157...1,720,050
Ensembl chr27:1,715,158...1,726,885
JBrowse link
G TMEM39A transmembrane protein 39A involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:23,083,979...23,121,269
Ensembl chr33:23,084,919...23,116,210
JBrowse link
G TRIM38 tripartite motif containing 38 acts_upstream_of_or_within ISO (MGI:5441682|PMID:22539786) MGI PMID:22539786 MGI:5441682 NCBI chr35:23,894,521...23,939,392
Ensembl chr35:23,926,287...23,939,466
JBrowse link
G VAPB VAMP associated protein B and C involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:43,182,158...43,238,019
Ensembl chr24:43,182,196...43,231,336
JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in ISO (PMID:25593157) AgBase PMID:25593157 NCBI chr30:25,176,845...25,210,244
Ensembl chr30:25,115,842...25,218,281
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,699,679...112,727,434
Ensembl chr 1:112,700,365...112,726,960
JBrowse link
G CD209 CD209 molecule involved_in ISO (PMID:22673088) FlyBase PMID:22673088 NCBI chr20:52,517,759...52,542,085
Ensembl chr20:52,518,036...52,520,942
JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:52,476,162...52,480,341
Ensembl chr20:52,476,200...52,479,930
JBrowse link
G KPNA2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chr 9:12,546,912...12,556,163 JBrowse link
G KPNA6 karyopherin subunit alpha 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:28189564)
(MGI:5898166|PMID:28189564)
Ensembl
MGI
PMID:28189564 GO_REF:0000107 MGI:5898166 NCBI chr 2:69,025,409...69,078,635
Ensembl chr 2:69,030,228...69,077,912
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:8,571,230...8,602,655
Ensembl chr30:8,571,475...8,598,721
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chr 5:80,327,059...80,340,380 JBrowse link
positive regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:99,405,322...99,408,257
Ensembl chr 1:99,405,337...99,410,163
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:789,586...817,925
Ensembl chr31:791,139...817,895
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in ISO (PMID:23051622) UniProt PMID:23051622 NCBI chr17:38,600,793...38,658,368 JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:22,995,677...23,050,084
Ensembl chr24:22,995,672...23,049,287
JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chr29:28,839,459...28,865,793
Ensembl chr29:28,839,516...28,865,023
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:55,064,720...55,097,623
Ensembl chr18:55,064,729...55,097,627
JBrowse link
G TSG101 tumor susceptibility 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:40,910,870...40,952,922
Ensembl chr21:40,910,874...40,952,808
JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:6,594,981...6,621,902
Ensembl chr26:6,595,030...6,620,408
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chr 5:80,327,059...80,340,380 JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:13,638,965...13,673,295
Ensembl chr 1:13,639,004...13,669,072
JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:55,458,934...55,494,563
Ensembl chr14:55,461,048...55,492,935
JBrowse link
G CAV2 caveolin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:55,437,622...55,445,481
Ensembl chr14:55,437,622...55,445,469
JBrowse link
G CTSL3 cathepsin L family member 3 involved_in ISO (PMID:16081529), (PMID:32221306), (PMID:32855215) UniProt PMID:16081529 PMID:32221306 PMID:32855215 NCBI chr 1:72,215,774...72,219,093 JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:9,834,285...9,895,755
Ensembl chr15:9,787,260...9,893,540
JBrowse link
G KIAA0319L KIAA0319 like acts_upstream_of_or_within ISO (MGI:5750797|PMID:26814968) MGI PMID:26814968 MGI:5750797 NCBI chr15:6,583,519...6,674,868
Ensembl chr15:6,583,488...6,675,579
JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:16,537,095...16,620,427
Ensembl chr37:16,541,562...16,619,554
JBrowse link
G TPCN2 two pore segment channel 2 involved_in ISO (PMID:32221306) UniProt PMID:32221306 NCBI chr18:48,956,833...48,984,499
Ensembl chr18:48,957,249...48,984,564
JBrowse link
receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:11,798,839...11,839,591
Ensembl chr  X:11,798,839...11,900,594
JBrowse link
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:60,975,196...61,005,869
Ensembl chr22:60,974,849...61,005,875
JBrowse link
G ICAM1 intercellular adhesion molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:50,818,715...50,827,914
Ensembl chr20:50,818,715...50,827,914
JBrowse link
G LRRC15 leucine rich repeat containing 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:31,332,502...31,345,895
Ensembl chr33:31,332,496...31,342,583
JBrowse link
regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:62,435,035...62,438,354
Ensembl chr13:62,434,422...62,438,354
JBrowse link
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNF8 SNF8 subunit of ESCRT-II involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:25,151,992...25,162,105
Ensembl chr 9:25,152,011...25,162,023
JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:70,137,232...70,387,797
Ensembl chr12:70,140,802...70,388,174
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:110,543,140...110,569,168
Ensembl chr 1:110,543,247...110,569,143
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:26,775,227...26,783,180
Ensembl chr21:26,775,672...26,783,725
JBrowse link
G TRIM22 tripartite motif containing 22 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:28,677,196...28,696,413
Ensembl chr21:28,682,973...28,695,185
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 9:31,703,628...31,725,674
Ensembl chr 9:31,707,034...31,725,762
JBrowse link
G TRIM27 tripartite motif containing 27 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr35:25,904,381...25,922,531
Ensembl chr35:25,905,396...25,923,336
JBrowse link
G TRIM34 tripartite motif containing 34 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:28,635,177...28,656,759
Ensembl chr21:28,635,396...28,654,490
JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr35:23,894,521...23,939,392
Ensembl chr35:23,926,287...23,939,466
JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:68,247,138...68,265,530
Ensembl chr 2:68,247,139...68,264,754
JBrowse link
G TRIM68 tripartite motif containing 68 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:26,982,173...26,992,162
Ensembl chr21:26,982,876...26,989,144
JBrowse link
G TRIML1 tripartite motif family like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:42,954,353...42,984,128
Ensembl chr16:42,954,012...42,980,309
JBrowse link
G TRIML2 tripartite motif family like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:42,984,204...43,000,037
Ensembl chr16:42,984,303...43,000,051
JBrowse link
regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:13,733,849...13,900,653
Ensembl chr 1:13,731,406...13,900,658
JBrowse link
G DDX5 DEAD-box helicase 5 ISO RGD PMID:19224332 RGD:5128521 NCBI chr 9:12,300,706...12,307,931
Ensembl chr 9:12,300,708...12,307,663
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr 8:63,970,245...64,029,438
Ensembl chr 8:63,972,027...64,019,879
JBrowse link
G LOC403581 peptidylprolyl isomerase A (cyclophilin A) pseudogene involved_in ISO (PMID:11250896) UniProt PMID:11250896 NCBI chr 7:80,937,433...80,938,175 JBrowse link
G MIR24-1 microRNA mir-24-1 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr 1:71,677,608...71,677,669
Ensembl chr 1:71,677,608...71,677,669
JBrowse link
G MIR24-2 microRNA mir-24-2 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr20:48,620,684...48,620,745
Ensembl chr20:48,620,674...48,620,745
JBrowse link
G MIR378 microRNA mir-378 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr 4:59,276,347...59,276,406
Ensembl chr 4:59,276,336...59,276,417
JBrowse link
G MIR93 microRNA mir-93 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr 6:9,498,780...9,498,840 JBrowse link
regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3Z3 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3Z3 acts_upstream_of_or_within ISO (MGI:54738|PMID:293683) MGI PMID:293683 MGI:54738 NCBI chr10:25,910,973...25,917,508
Ensembl chr10:25,911,291...25,913,808
JBrowse link
G LAMP3 lysosomal associated membrane protein 3 involved_in ISO (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chr34:16,092,172...16,126,563 JBrowse link
regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRIM25 tripartite motif containing 25 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 9:31,703,628...31,725,674
Ensembl chr 9:31,707,034...31,725,762
JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:68,247,138...68,265,530
Ensembl chr 2:68,247,139...68,264,754
JBrowse link
G TSG101 tumor susceptibility 101 NOT|involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chr21:40,910,870...40,952,922
Ensembl chr21:40,910,874...40,952,808
JBrowse link
single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within ISO (PMID:14963118) MGI PMID:14963118 NCBI chr26:28,692,610...28,728,778
Ensembl chr26:28,692,899...28,728,783
JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP4B charged multivesicular body protein 4B involved_in ISO (PMID:17701905) UniProt PMID:17701905 NCBI chr24:22,995,677...23,050,084
Ensembl chr24:22,995,672...23,049,287
JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:50,363,488...50,376,081 JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:55,855,576...55,894,915
Ensembl chr 9:55,856,091...55,894,488
JBrowse link
G MVB12A multivesicular body subunit 12A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:45,365,850...45,370,114
Ensembl chr20:45,365,852...45,370,014
JBrowse link
G MVB12B multivesicular body subunit 12B involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 9:56,721,599...56,908,723
Ensembl chr 9:56,707,258...56,907,716
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of
involved_in
ISO
IEA
(PMID:15126635) BHF-UCL
Ensembl
PMID:15126635 GO_REF:0000107 NCBI chr30:21,123,333...21,229,907
Ensembl chr30:21,126,043...21,229,870
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (PMID:18641129) UniProt PMID:18641129 NCBI chr23:4,112,299...4,199,230
Ensembl chr23:4,112,363...4,196,342
JBrowse link
G TSG101 tumor susceptibility 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:40,910,870...40,952,922
Ensembl chr21:40,910,874...40,952,808
JBrowse link
G VTA1 vesicle trafficking 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:33,830,300...33,895,865
Ensembl chr 1:33,830,313...33,895,073
JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP2A charged multivesicular body protein 2A involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr 1:99,405,322...99,408,257
Ensembl chr 1:99,405,337...99,410,163
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr17:38,600,793...38,658,368 JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr24:22,995,677...23,050,084
Ensembl chr24:22,995,672...23,049,287
JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr29:28,839,459...28,865,793
Ensembl chr29:28,839,516...28,865,023
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:16193069), (PMID:17940959) UniProt PMID:16193069 PMID:17940959 NCBI chr 5:80,327,059...80,340,380 JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in ISO (PMID:14505570), (PMID:16193069), (PMID:17940959) UniProt PMID:14505570 PMID:16193069 PMID:17940959 NCBI chr 1:13,638,965...13,673,295
Ensembl chr 1:13,639,004...13,669,072
JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP1B charged multivesicular body protein 1B involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chr 7:77,500,378...77,503,092 JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:99,405,322...99,408,257
Ensembl chr 1:99,405,337...99,410,163
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:789,586...817,925
Ensembl chr31:791,139...817,895
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in ISO (PMID:16740483), (PMID:23051622)
(PMID:24878737)
UniProt PMID:16740483 PMID:23051622 PMID:24878737 NCBI chr17:38,600,793...38,658,368 JBrowse link
G CHMP4A charged multivesicular body protein 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:4,195,766...4,200,101
Ensembl chr 8:4,195,975...4,200,086
JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:22,995,677...23,050,084
Ensembl chr24:22,995,672...23,049,287
JBrowse link
G CHMP6 charged multivesicular body protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:997,951...1,001,659
Ensembl chr 9:998,653...1,002,538
JBrowse link
G MITD1 microtubule interacting and trafficking domain containing 1 NOT|involved_in ISO (PMID:23045692) UniProt PMID:23045692 NCBI chr10:43,513,240...43,525,543
Ensembl chr10:43,513,277...43,523,883
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (PMID:24107264) UniProt PMID:24107264 NCBI chr23:4,112,299...4,199,230
Ensembl chr23:4,112,363...4,196,342
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:24107264) UniProt PMID:24107264 NCBI chr 5:80,327,059...80,340,380 JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:13,638,965...13,673,295
Ensembl chr 1:13,639,004...13,669,072
JBrowse link
viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:11,798,839...11,839,591
Ensembl chr  X:11,798,839...11,900,594
JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:43,569,658...43,617,113
Ensembl chr23:43,614,035...43,616,238
JBrowse link
G ANPEP alanyl aminopeptidase, membrane involved_in IEA GOC GO_REF:0000108 NCBI chr 3:52,764,418...52,779,516
Ensembl chr 3:52,764,418...52,779,746
JBrowse link
G AVP arginine vasopressin involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:18,183,057...18,184,827
Ensembl chr24:18,183,057...18,184,883
JBrowse link
G AVPR1B arginine vasopressin receptor 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,440,574...2,446,037
Ensembl chr38:2,440,615...2,446,037
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,699,679...112,727,434
Ensembl chr 1:112,700,365...112,726,960
JBrowse link
G CD209 CD209 molecule involved_in ISO (PMID:24623090) FlyBase PMID:24623090 NCBI chr20:52,517,759...52,542,085
Ensembl chr20:52,518,036...52,520,942
JBrowse link
G CD81 CD81 molecule involved_in IEA GOC GO_REF:0000108 NCBI chr18:46,466,484...46,474,236
Ensembl chr18:46,466,499...46,473,868
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:49235|PMID:1719235) MGI PMID:1719235 MGI:49235 NCBI chr 1:111,902,429...111,919,191
Ensembl chr 1:111,745,413...111,917,830
JBrowse link
G CLDN1 claudin 1 involved_in IEA GOC GO_REF:0000108 NCBI chr34:22,303,058...22,319,101
Ensembl chr34:22,303,850...22,319,033
JBrowse link
G CLDN6 claudin 6 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:38,168,793...38,171,827
Ensembl chr 6:38,170,608...38,171,273
JBrowse link
G CLDN9 claudin 9 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:38,172,035...38,174,089
Ensembl chr 6:38,172,550...38,173,203
JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:52,476,162...52,480,341
Ensembl chr20:52,476,200...52,479,930
JBrowse link
G CLEC5A C-type lectin domain containing 5A involved_in IEA GOC GO_REF:0000108 NCBI chr16:7,242,424...7,269,986
Ensembl chr16:7,243,018...7,269,418
JBrowse link
G CTSB cathepsin B involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:26,048,237...26,056,570
Ensembl chr25:26,048,253...26,055,801
JBrowse link
G CTSL3 cathepsin L family member 3 involved_in ISO (PMID:16339146), (PMID:18562523), (PMID:26953343), (PMID:32855215) UniProt PMID:16339146 PMID:18562523 PMID:26953343 PMID:32855215 NCBI chr 1:72,215,774...72,219,093 JBrowse link
G DAG1 dystroglycan 1 involved_in IEA GOC GO_REF:0000108 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550
JBrowse link
G DPP4 dipeptidyl peptidase 4 involved_in IEA GOC GO_REF:0000108 NCBI chr36:7,398,713...7,472,554
Ensembl chr36:7,399,643...7,454,204
JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) CACAO PMID:20202662 NCBI chr15:9,834,285...9,895,755
Ensembl chr15:9,787,260...9,893,540
JBrowse link
G GAS6 growth arrest specific 6 involved_in ISO (PMID:21501828) UniProt PMID:21501828 NCBI chr22:60,975,196...61,005,869
Ensembl chr22:60,974,849...61,005,875
JBrowse link
G GPR15 G protein-coupled receptor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:5,368,509...5,380,024
Ensembl chr33:5,396,083...5,397,165
Ensembl chr33:5,396,083...5,397,165
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,148,566...50,167,422
Ensembl chr18:50,148,598...50,167,428
JBrowse link
G HAVCR1 hepatitis A virus cellular receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:53,012,223...53,066,611
Ensembl chr 4:53,046,970...53,128,952
Ensembl chr 4:53,046,970...53,128,952
JBrowse link
G HYAL1 hyaluronidase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr20:39,035,924...39,040,443
Ensembl chr20:39,038,514...39,040,368
JBrowse link
G HYAL2 hyaluronidase 2 involved_in ISS
ISO
facilitates UniProt
RGD
PMID:12584308 GO_REF:0000024 RGD:633153 NCBI chr20:39,029,426...39,034,451
Ensembl chr20:39,031,735...39,034,130
JBrowse link
G ITGAV integrin subunit alpha V involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:28,815,215...28,890,569
Ensembl chr36:28,804,013...28,887,430
JBrowse link
G ITGB3 integrin subunit beta 3 involved_in ISO (PMID:25063885) UniProt PMID:25063885 NCBI chr 9:9,179,667...9,231,061
Ensembl chr 9:9,182,562...9,231,451
JBrowse link
G LAMP3 lysosomal associated membrane protein 3 NOT|involved_in ISO (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chr34:16,092,172...16,126,563 JBrowse link
G LOC100688853 phospholipid scramblase 1-like involved_in IEA GOC GO_REF:0000108 NCBI chr23:41,591,425...41,625,918
Ensembl chr23:41,599,843...41,669,112
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 ISO RGD PMID:12584355 RGD:1599797 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060
JBrowse link
G NECTIN4 nectin cell adhesion molecule 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr38:21,378,144...21,392,419
Ensembl chr38:21,375,556...21,392,632
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:64,764,941...64,802,507
Ensembl chr 7:64,760,121...64,802,902
JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483
JBrowse link
G PHB prohibitin involved_in ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chr 9:25,525,711...25,536,722
Ensembl chr 9:25,526,649...25,536,722
JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr23:41,639,938...41,668,972
Ensembl chr23:41,599,843...41,669,112
JBrowse link
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) AgBase PMID:12857889 NCBI chr24:17,636,143...17,667,791
Ensembl chr24:17,636,026...17,666,854
JBrowse link
G SIVA1 SIVA1 apoptosis inducing factor involved_in IEA GOC GO_REF:0000108 NCBI chr 8:72,309,400...72,313,726
Ensembl chr 8:72,309,447...72,313,640
JBrowse link
G SLC3A2 solute carrier family 3 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:53,810,468...53,819,021
Ensembl chr18:53,810,398...53,819,021
JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:29,714,418...29,719,035
Ensembl chr21:29,714,557...29,719,033
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr30:8,571,230...8,602,655
Ensembl chr30:8,571,475...8,598,721
JBrowse link
G UVRAG UV radiation resistance associated involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5552992|PMID:24550300) Ensembl
MGI
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr21:22,505,968...22,821,027
Ensembl chr21:22,507,162...22,820,824
JBrowse link
G VAMP8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:24550300) MGI PMID:24550300 NCBI chr17:39,497,628...39,501,734
Ensembl chr17:39,497,785...39,501,739
JBrowse link
G VPS16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr24:18,401,440...18,424,605
Ensembl chr24:18,399,572...18,424,510
JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5552992|PMID:24550300) Ensembl
MGI
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr30:8,027,877...8,036,773
Ensembl chr30:8,027,128...8,036,153
JBrowse link
G XPR1 xenotropic and polytropic retrovirus receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 7:14,165,608...14,379,822
Ensembl chr 7:14,165,608...14,379,822
JBrowse link
G ZNF639 zinc finger protein 639 involved_in IEA Ensembl GO_REF:0000107 NCBI chr34:12,767,067...12,775,995
Ensembl chr34:12,766,681...12,775,792
JBrowse link
viral exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ADP ribosylation factor like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:12,479,680...12,525,330
Ensembl chr20:12,481,860...12,525,499
JBrowse link
viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:60,975,196...61,005,869
Ensembl chr22:60,974,849...61,005,875
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,148,566...50,167,422
Ensembl chr18:50,148,598...50,167,428
JBrowse link
G KPNA6 karyopherin subunit alpha 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5898166|PMID:28189564) Ensembl
MGI
PMID:28189564 GO_REF:0000107 MGI:5898166 NCBI chr 2:69,025,409...69,078,635
Ensembl chr 2:69,030,228...69,077,912
JBrowse link
G REEP4 receptor accessory protein 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr25:35,109,210...35,113,152
Ensembl chr25:35,109,236...35,117,048
JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,636,986...51,651,749
Ensembl chr11:51,637,411...51,651,714
JBrowse link
viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IST1 IST1 factor associated with ESCRT-III involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:77,660,033...77,693,831
Ensembl chr 5:77,660,081...77,692,396
JBrowse link
G RAB7A RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,704,716...2,776,518
Ensembl chr20:2,704,752...2,826,636
JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:13,638,965...13,673,295
Ensembl chr 1:13,639,004...13,669,072
JBrowse link
viral replication complex formation and maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PI4KA phosphatidylinositol 4-kinase alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:30,630,693...30,749,158
Ensembl chr26:30,630,261...30,749,126
JBrowse link
viral RNA genome packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX6 DEAD-box helicase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:15,001,988...15,034,128
Ensembl chr 5:15,002,246...15,032,348
JBrowse link
G PC pyruvate carboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,406,994...50,507,677
Ensembl chr18:50,412,272...50,507,669
JBrowse link
viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EEA1 early endosome antigen 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:33,145,250...33,234,899
Ensembl chr15:33,148,637...33,256,669
JBrowse link
G LOC403934 cell division cycle 42 involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chr 2:77,153,276...77,169,947
Ensembl chr 2:77,153,095...77,199,211
JBrowse link
G PCBP1 poly(rC) binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:68,686,278...68,687,916 JBrowse link
G PCBP2 poly(rC) binding protein 2 involved_in ISO (PMID:12414943) UniProt PMID:12414943 NCBI chr27:1,736,264...1,759,416 JBrowse link
G PI4KA phosphatidylinositol 4-kinase alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:30,630,693...30,749,158
Ensembl chr26:30,630,261...30,749,126
JBrowse link
G PIK3C2G phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chr27:28,446,629...28,818,198
Ensembl chr27:28,424,899...28,796,902
JBrowse link
G RAB29 RAB29, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr38:2,196,618...2,204,150
Ensembl chr38:2,198,040...2,203,896
JBrowse link
G RAB5A RAB5A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:23,303,650...23,333,571
Ensembl chr23:23,304,940...23,332,206
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:7,931,786...8,012,484
Ensembl chr17:7,934,739...8,178,707
JBrowse link
virion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440
JBrowse link
G RAB1A RAB1A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:64,564,351...64,590,654
Ensembl chr10:64,564,298...64,590,705
JBrowse link
G RAB1B RAB1B, member RAS oncogene family involved_in
NOT|involved_in
ISO (PMID:21680502) UniProt PMID:21680502 NCBI chr18:51,026,975...51,034,356
Ensembl chr18:51,028,013...51,034,473
JBrowse link
G RAB43 RAB43, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:2,979,094...3,020,496
Ensembl chr20:2,978,727...3,011,715
JBrowse link
G SPCS1 signal peptidase complex subunit 1 involved_in ISO (PMID:24009510), (PMID:29593046) UniProt PMID:24009510 PMID:29593046 NCBI chr20:37,091,420...37,092,972
Ensembl chr20:37,091,792...37,263,577
JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:20,400,647...20,419,652
Ensembl chr24:20,400,791...20,419,655
JBrowse link
G USP6NL USP6 N-terminal like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:24,724,454...24,894,052
Ensembl chr 2:24,743,120...24,891,668
JBrowse link
virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSP90AB1 heat shock protein 90 alpha family class B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,658,415...12,664,945
Ensembl chr12:12,660,008...12,664,940
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:110,543,140...110,569,168
Ensembl chr 1:110,543,247...110,569,143
JBrowse link
virus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MVB12A multivesicular body subunit 12A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:45,365,850...45,370,114
Ensembl chr20:45,365,852...45,370,014
JBrowse link
G MVB12B multivesicular body subunit 12B involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 9:56,721,599...56,908,723
Ensembl chr 9:56,707,258...56,907,716
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16216
    viral process 325
      viral life cycle 246
        intracellular transport of virus + 6
        negative regulation of viral life cycle + 25
        positive regulation of viral life cycle + 37
        regulation of viral life cycle + 147
        viral entry into host cell + 90
        viral genome integration into host DNA 0
        viral genome replication + 117
        viral release from host cell + 32
        virion assembly + 30
        virion attachment to host cell + 7
        virus maturation + 2
paths to the root