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ONTOLOGY REPORT - ANNOTATIONS


Term:viral life cycle
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Accession:GO:0019058 term browser browse the term
Definition:A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.
Synonyms:narrow_synonym: viral assembly, maturation, egress, and release
 related_synonym: lytic viral life cycle;   viral infectious cycle;   viral replication
 alt_id: GO:0019067


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viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FURIN furin, paired basic amino acid cleaving enzyme involved_in ISO (PMID:8940009) BHF-UCL PMID:8940009 NCBI chr15:69,560,774...69,576,007
Ensembl chr15:88,763,269...88,774,023
JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in ISO (PMID:8940009)
(MGI:3799615|PMID:8940009)
BHF-UCL PMID:8940009 MGI:3799615 NCBI chr 9:48,480,607...48,943,331
Ensembl chr 9:74,745,761...75,220,502
JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) AgBase PMID:12857889 NCBI chr20:3,769,118...3,795,678
Ensembl chr20:3,526,791...3,552,309
JBrowse link
coreceptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NECTIN2 nectin cell adhesion molecule 2 involved_in ISO (PMID:12915581) BHF-UCL PMID:12915581 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024
JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KPNA2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chr17:61,968,807...61,979,954
Ensembl chr17:67,161,908...67,173,410
JBrowse link
G KPNA6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chr 1:31,394,159...31,462,821
Ensembl chr 1:32,406,326...32,471,488
JBrowse link
fusion of virus membrane with host endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in ISO (PMID:16081529), (PMID:18562523) UniProt PMID:16081529 PMID:18562523 NCBI chr 9:58,851,899...58,857,170
Ensembl chr 9:86,903,006...86,908,303
JBrowse link
fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 9:58,851,899...58,857,170
Ensembl chr 9:86,903,006...86,908,303
JBrowse link
G HYAL2 hyaluronidase 2 involved_in ISO (PMID:11296287) UniProt PMID:11296287 NCBI chr 3:50,243,926...50,248,972
Ensembl chr 3:51,479,020...51,482,551
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in ISO (PMID:12915581) BHF-UCL PMID:12915581 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024
JBrowse link
intracellular transport of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 involved_in ISO (PMID:25540360) AgBase PMID:25540360 NCBI chr 7:87,724,604...88,050,624
Ensembl chr 7:101,344,053...101,648,607
JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFI27 interferon alpha inducible protein 27 involved_in ISO (PMID:27777077) UniProt PMID:27777077 NCBI chr14:74,742,775...74,748,820
Ensembl chr14:94,046,694...94,082,022
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXL2 F-box and leucine rich repeat protein 2 involved_in ISO (PMID:15893726) UniProt PMID:15893726 NCBI chr 3:33,199,436...33,308,831
Ensembl chr 3:33,501,525...33,610,039
JBrowse link
G FMR1 FMRP translational regulator 1 involved_in ISO (PMID:24514761) UniProt PMID:24514761 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G PHB prohibitin involved_in ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chr17:8,189,555...8,200,491
Ensembl chr17:8,175,968...8,186,790
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 C-C motif chemokine ligand 8 involved_in ISO (PMID:20181935) ARUK-UCL PMID:20181935 NCBI chr17:22,468,080...22,470,443
Ensembl chr17:22,761,064...22,763,933
JBrowse link
G CCNK cyclin K involved_in ISO (PMID:21555514) CACAO PMID:21555514 NCBI chr14:80,105,372...80,136,511
Ensembl chr14:99,438,814...99,480,842
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chr19:39,395,550...39,417,063
Ensembl chr19:47,989,430...48,008,739
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:33,780,381...33,796,829
Ensembl chr  X:41,475,116...41,505,837
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:25244949) AgBase PMID:25244949 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770
JBrowse link
G VAPA VAMP associated protein A involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
G ZBED1 zinc finger BED-type containing 1 involved_in ISO (PMID:25210186) UniProt PMID:25210186 Ensembl chr  X:2,441,985...2,444,069 JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in ISO (PMID:23355615) UniProt PMID:23355615 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST2 bone marrow stromal cell antigen 2 involved_in ISO (PMID:19036818), (PMID:20686043), (PMID:20943977)
(MGI:5437427|PMID:20686043)
(MGI:5437405|PMID:22284121), (MGI:5448513|PMID:21919738)
UniProt PMID:19036818 PMID:20686043 PMID:20943977 PMID:21919738 PMID:22284121 MGI:5437405 MGI:5437427 MGI:5448513 NCBI chr19:16,890,257...16,892,989
Ensembl chr19:17,863,991...17,866,728
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in ISO (PMID:20167191) AgBase PMID:20167191 NCBI chr21:27,756,768...27,795,307
Ensembl chr21:41,095,928...41,123,019
JBrowse link
G TRIM15 tripartite motif containing 15 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:29,939,261...29,949,706
Ensembl chr 6:30,610,348...30,619,826
JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3D apolipoprotein B mRNA editing enzyme catalytic subunit 3D involved_in ISO (PMID:21835787) UniProt PMID:21835787 NCBI chr22:19,931,452...19,942,829 JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F involved_in ISO (PMID:17121840), (PMID:21835787) UniProt PMID:17121840 PMID:21835787 NCBI chr22:19,950,036...19,966,002 JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G involved_in ISO (PMID:16571802), (PMID:17121840), (PMID:21835787) UniProt PMID:16571802 PMID:17121840 PMID:21835787 NCBI chr22:19,977,184...19,994,769 JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H involved_in ISO (PMID:18779051), (PMID:21835787) UniProt PMID:18779051 PMID:21835787 NCBI chr22:20,003,585...20,010,741
Ensembl chr22:37,821,315...37,828,153
JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in ISO (PMID:17005673) UniProt PMID:17005673 NCBI chr12:22,954,946...23,096,623 JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:18774950) UniProt PMID:18774950 NCBI chr17:1,477,511...1,499,765
Ensembl chr17:1,377,312...1,399,373
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:29211708)
(MGI:6271895|PMID:29728365)
UniProt PMID:29211708 PMID:29728365 MGI:6271895 NCBI chr22:11,912,043...11,995,497
Ensembl chr22:29,753,241...29,795,632
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 involved_in ISO (PMID:29211708) UniProt PMID:29211708 NCBI chr13:932,620...999,853
Ensembl chr13:19,278,149...19,316,389
JBrowse link
G RESF1 retroelement silencing factor 1 involved_in ISO (MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:6271895 NCBI chr12:54,238,276...54,272,288
Ensembl chr12:56,829,272...56,863,359
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (MGI:5440670|PMID:20164836), (MGI:6271895|PMID:29728365) UniProt PMID:20164836 PMID:29728365 MGI:5440670 MGI:6271895 NCBI chr 1:126,275,719...126,314,043
Ensembl chr 1:129,925,009...129,962,442
JBrowse link
G TASOR transcription activation suppressor involved_in ISO (PMID:29211708) UniProt PMID:29211708 NCBI chr 3:56,555,945...56,619,151
Ensembl chr 3:57,771,656...57,834,077
JBrowse link
G TRIM28 tripartite motif containing 28 acts_upstream_of_or_within
involved_in
ISO (MGI:3842857|PMID:19270682)
(MGI:5440670|PMID:20164836)
MGI
UniProt
PMID:19270682 PMID:20164836 MGI:3842857 MGI:5440670 NCBI chr19:55,557,130...55,563,802
Ensembl chr19:64,371,477...64,377,144
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:134,937,472...134,938,512
Ensembl chr 1:138,734,046...138,735,093
JBrowse link
G CD74 CD74 molecule involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334
JBrowse link
G CIITA class II major histocompatibility complex transactivator involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr16:9,819,440...9,885,379
Ensembl chr16:11,041,434...11,090,485
JBrowse link
G FCN1 ficolin 1 involved_in ISO (PMID:22851708) UniProt PMID:22851708 NCBI chr 9:106,039,315...106,047,648
Ensembl chr 9:135,040,310...135,049,111
JBrowse link
G FCN3 ficolin 3 involved_in ISO (PMID:22851708) UniProt PMID:22851708 NCBI chr 1:26,620,373...26,636,424
Ensembl chr 1:27,676,866...27,683,861
JBrowse link
G GSN gelsolin involved_in ISO (PMID:23575248) UniProt PMID:23575248 NCBI chr 9:92,413,819...92,460,483
Ensembl chr 9:120,741,148...120,805,831
JBrowse link
G IFITM1 interferon induced transmembrane protein 1 involved_in ISO (PMID:21253575), (PMID:23358889), (PMID:26354436) UniProt PMID:21253575 PMID:23358889 PMID:26354436 NCBI chr11:309,930...311,177 JBrowse link
G IFITM2 interferon induced transmembrane protein 2 involved_in ISO (PMID:21253575), (PMID:23358889), (PMID:26354436), (PMID:33563656) UniProt PMID:21253575 PMID:23358889 PMID:26354436 PMID:33563656 NCBI chr11:304,068...305,273 JBrowse link
G LOC100969436 interferon-induced transmembrane protein 2 involved_in ISO (MGI:5437420|PMID:21253575) UniProt PMID:21253575 MGI:5437420 Ensembl chr11:348,341...349,551 JBrowse link
G LOC100970132 interferon-induced transmembrane protein 1 acts_upstream_of_or_within
involved_in
ISO (MGI:5780029|PMID:25738301)
(MGI:5437420|PMID:21253575)
MGI
UniProt
PMID:21253575 PMID:25738301 MGI:5437420 MGI:5780029 Ensembl chr11:353,236...354,986 JBrowse link
G LOC100972354 interferon alpha-2 involved_in ISO (PMID:22783022) BHF-UCL PMID:22783022 NCBI chr 9:21,245,017...21,246,210
Ensembl chr 9:21,863,062...21,863,736
JBrowse link
G MID2 midline 2 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr  X:96,917,731...97,026,545
Ensembl chr  X:107,290,776...107,393,162
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966
JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307
JBrowse link
G PTX3 pentraxin 3 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:154,485,470...154,492,293
Ensembl chr 3:162,537,577...162,543,652
JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr 5:127,972,630...128,059,911 JBrowse link
G SNX3 sorting nexin 3 involved_in ISO (PMID:18767904) UniProt PMID:18767904 NCBI chr 6:106,010,633...106,063,331
Ensembl chr 6:109,874,105...109,924,185
JBrowse link
G TRIM10 tripartite motif containing 10 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 6:29,929,516...29,938,355
Ensembl chr 6:30,601,812...30,608,082
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chr 1:203,795,924...203,809,703
Ensembl chr 1:209,006,979...209,019,994
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr17:50,965,592...50,991,630
Ensembl chr17:55,826,458...55,852,422
JBrowse link
G TRIM26 tripartite motif containing 26 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:29,962,838...29,990,710
Ensembl chr 6:30,632,948...30,660,809
JBrowse link
G TRIM31 tripartite motif containing 31 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chr 6:29,880,668...29,890,905
Ensembl chr 6:30,550,802...30,560,977
JBrowse link
G TRIM5 tripartite motif containing 5 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr11:5,798,336...5,819,876
Ensembl chr11:5,479,033...5,500,758
JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 7:93,225,830...93,231,127
Ensembl chr 7:106,469,474...106,471,741
JBrowse link
G TRIM59 tripartite motif containing 59 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 3:157,458,982...157,471,521 JBrowse link
G TRIM8 tripartite motif containing 8 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr10:99,242,187...99,256,342
Ensembl chr10:102,707,199...102,720,565
JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific acts_upstream_of_or_within ISO (MGI:4939544|PMID:21173229) MGI PMID:21173229 MGI:4939544 NCBI chr 1:129,937,993...129,983,747 JBrowse link
G APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A involved_in ISO (PMID:16527742) UniProt PMID:16527742 NCBI chr22:19,866,522...19,872,836 JBrowse link
G APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C involved_in ISO (PMID:21632763) UniProt PMID:21632763 NCBI chr22:19,924,116...19,930,771
Ensembl chr22:37,743,388...37,749,725
JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F involved_in ISO (PMID:16378963), (PMID:17121840) BHF-UCL PMID:16378963 PMID:17121840 NCBI chr22:19,950,036...19,966,002 JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G involved_in ISO (PMID:16378963), (PMID:17121840) UniProt PMID:16378963 PMID:17121840 NCBI chr22:19,977,184...19,994,769 JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H involved_in ISO (MGI:5486557|PMID:16378963) UniProt PMID:16378963 MGI:5486557 NCBI chr22:20,003,585...20,010,741
Ensembl chr22:37,821,315...37,828,153
JBrowse link
G BANF1 BAF nuclear assembly factor 1 involved_in ISO (PMID:18005698) UniProt PMID:18005698 NCBI chr11:61,366,480...61,368,547
Ensembl chr11:64,693,447...64,695,509
JBrowse link
G BST2 bone marrow stromal cell antigen 2 involved_in ISO (PMID:20943977)
(MGI:5437405|PMID:22284121), (MGI:5448513|PMID:21919738)
UniProt PMID:20943977 PMID:21919738 PMID:22284121 MGI:5437405 MGI:5448513 NCBI chr19:16,890,257...16,892,989
Ensembl chr19:17,863,991...17,866,728
JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10490959) BHF-UCL PMID:10490959 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172
JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in ISO (PMID:19189853), (PMID:19840259)
(MGI:5487533|PMID:20038207)
UniProt PMID:19189853 PMID:19840259 PMID:20038207 MGI:5487533 NCBI chr2A:37,130,386...37,184,587
Ensembl chr2A:37,895,814...37,941,686
JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in ISO (PMID:23093934) UniProt PMID:23093934 NCBI chr11:54,359,711...54,372,132
Ensembl chr11:57,818,413...57,823,046
JBrowse link
G IFI16 interferon gamma inducible protein 16 involved_in ISO (PMID:22291595) UniProt PMID:22291595 NCBI chr 1:134,364,706...134,405,910
Ensembl chr 1:138,152,328...138,203,424
JBrowse link
G IFIH1 interferon induced with helicase C domain 1 involved_in ISO (PMID:33727702) UniProt PMID:33727702 NCBI chr2B:49,560,620...49,612,086
Ensembl chr2B:166,928,994...166,980,170
JBrowse link
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 involved_in ISO (PMID:19008854), (PMID:21976647) UniProt PMID:19008854 PMID:21976647 NCBI chr10:86,117,807...86,129,256
Ensembl chr10:89,667,149...89,668,579
JBrowse link
G IFIT5 interferon induced protein with tetratricopeptide repeats 5 involved_in ISO (PMID:23774268) UniProt PMID:23774268 NCBI chr10:86,139,816...86,146,244
Ensembl chr10:89,678,703...89,685,839
JBrowse link
G IFITM1 interferon induced transmembrane protein 1 involved_in ISO (PMID:21253575)
(PMID:21976647)
UniProt PMID:21253575 PMID:21976647 NCBI chr11:309,930...311,177 JBrowse link
G IFITM2 interferon induced transmembrane protein 2 involved_in ISO (PMID:21253575) UniProt PMID:21253575 NCBI chr11:304,068...305,273 JBrowse link
G IFNB1 interferon beta 1 involved_in ISO (PMID:19008854) BHF-UCL PMID:19008854 NCBI chr 9:20,884,742...20,886,317 JBrowse link
G ILF3 interleukin enhancer binding factor 3 involved_in ISO (MGI:4867319|PMID:21123651) UniProt PMID:21123651 MGI:4867319 NCBI chr19:10,206,636...10,244,779
Ensembl chr19:10,867,143...10,905,953
JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 involved_in ISO (PMID:21036379) UniProt PMID:21036379 NCBI chr15:67,328,334...67,345,085
Ensembl chr15:86,536,647...86,553,751
JBrowse link
G LTF lactotransferrin involved_in ISO (PMID:25193851) AgBase PMID:25193851 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532
JBrowse link
G MAVS mitochondrial antiviral signaling protein involved_in ISO (PMID:20451243)
(MGI:4881394|PMID:20451243)
UniProt PMID:20451243 MGI:4881394 NCBI chr20:3,885,044...3,903,554
Ensembl chr20:3,659,559...3,701,089
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in ISO (PMID:24500530)
(PMID:14687945), (PMID:15047845), (PMID:16202617)
AgBase
UniProt
PMID:14687945 PMID:15047845 PMID:16202617 PMID:24500530 NCBI chr21:27,756,768...27,795,307
Ensembl chr21:41,095,928...41,123,019
JBrowse link
G N4BP1 NEDD4 binding protein 1 involved_in ISO (PMID:31133753) UniProt PMID:31133753 NCBI chr16:28,809,881...28,881,352
Ensembl chr16:47,698,353...47,769,755
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 involved_in ISO (PMID:20844035)
(PMID:18931074), (PMID:19923450), (PMID:23196181)
UniProt PMID:18931074 PMID:19923450 PMID:20844035 PMID:23196181 NCBI chr12:110,511,984...110,525,343
Ensembl chr12:113,896,760...113,921,814
JBrowse link
G OAS3 2'-5'-oligoadenylate synthetase 3 involved_in ISO (PMID:19056102), (PMID:19923450), (PMID:23196181) UniProt PMID:19056102 PMID:19923450 PMID:23196181 NCBI chr12:110,543,522...110,578,463
Ensembl chr12:113,928,202...113,959,654
JBrowse link
G OASL 2'-5'-oligoadenylate synthetase like involved_in ISO (PMID:18931074), (PMID:20074559) UniProt PMID:18931074 PMID:20074559 NCBI chr12:118,602,088...118,621,056
Ensembl chr12:121,971,880...121,990,855
JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 involved_in ISO (PMID:22176891) UniProt PMID:22176891 NCBI chr 8:140,743,061...140,744,014
Ensembl chr 8:143,735,819...143,744,138
JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in ISO (PMID:15308695)
(MGI:5284800|PMID:15308695)
UniProt PMID:15308695 MGI:5284800 NCBI chr 3:143,528,967...143,558,468
Ensembl chr 3:151,112,483...151,132,964
JBrowse link
G PROX1 prospero homeobox 1 involved_in ISO (PMID:19264593) BHF-UCL PMID:19264593 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763
JBrowse link
G RNASEL ribonuclease L involved_in ISO (PMID:19923450), (PMID:23196181) UniProt PMID:19923450 PMID:23196181 NCBI chr 1:158,092,346...158,108,026
Ensembl chr 1:161,741,645...161,760,045
JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 involved_in ISO (PMID:21957124)
(MGI:5431072|PMID:21880757)
UniProt PMID:21880757 PMID:21957124 MGI:5431072 NCBI chr2A:6,873,821...6,906,087
Ensembl chr2A:7,021,937...7,042,961
JBrowse link
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chr19:9,634,718...9,641,824
Ensembl chr19:10,293,967...10,301,067
JBrowse link
G SLPI secretory leukocyte peptidase inhibitor involved_in ISO (PMID:19333378) UniProt PMID:19333378 NCBI chr20:41,583,429...41,585,773
Ensembl chr20:42,673,417...42,675,773
JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in ISO (PMID:12417631) BHF-UCL PMID:12417631 NCBI chr 6:35,393,290...35,480,530
Ensembl chr 6:36,598,552...36,683,257
JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in ISO (PMID:12417631) BHF-UCL PMID:12417631 NCBI chr 7:97,102,226...97,378,773
Ensembl chr 7:109,834,478...109,989,050
JBrowse link
G TNF tumor necrosis factor involved_in ISO (PMID:10490959) BHF-UCL PMID:10490959 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TRIM6 tripartite motif containing 6 involved_in ISO (PMID:24882218)
(MGI:5645191|PMID:24882218)
UniProt PMID:24882218 MGI:5645191 NCBI chr11:5,731,256...5,748,057
Ensembl chr11:5,413,491...5,460,532
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO (PMID:21102435), (PMID:21876179) UniProt PMID:21102435 PMID:21876179 RGD:8554819 NCBI chr 7:131,002,580...131,068,513
Ensembl chr 7:143,489,750...143,555,438
JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 involved_in ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063
JBrowse link
G IL32 interleukin 32 acts_upstream_of ISO (PMID:23729669) ARUK-UCL PMID:23729669 NCBI chr16:2,007,018...2,023,757
Ensembl chr16:3,179,637...3,203,929
JBrowse link
G PPIA peptidylprolyl isomerase A involved_in ISO (PMID:19207730), (PMID:22347431) UniProt PMID:19207730 PMID:22347431 NCBI chr 7:45,510,450...45,515,448
Ensembl chr 7:45,578,765...45,605,545
JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100970314 charged multivesicular body protein 3 involved_in ISO (PMID:16740483) UniProt PMID:16740483 NCBI chr2A:86,559,695...86,619,615
Ensembl chr2A:88,106,242...88,165,104
JBrowse link
G MID2 midline 2 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr  X:96,917,731...97,026,545
Ensembl chr  X:107,290,776...107,393,162
JBrowse link
G PML PML nuclear body scaffold involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chr15:52,903,874...52,955,151
Ensembl chr15:71,658,884...71,710,883
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chr 1:203,795,924...203,809,703
Ensembl chr 1:209,006,979...209,019,994
JBrowse link
G TRIM13 tripartite motif containing 13 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr13:31,137,236...31,153,398
Ensembl chr13:49,889,041...49,900,488
JBrowse link
G TRIM15 tripartite motif containing 15 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:29,939,261...29,949,706
Ensembl chr 6:30,610,348...30,619,826
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr11:4,588,083...4,596,942
Ensembl chr11:4,254,152...4,262,981
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr17:50,965,592...50,991,630
Ensembl chr17:55,826,458...55,852,422
JBrowse link
G TRIM26 tripartite motif containing 26 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:29,962,838...29,990,710
Ensembl chr 6:30,632,948...30,660,809
JBrowse link
G TRIM27 tripartite motif containing 27 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 6:28,722,505...28,743,484
Ensembl chr 6:29,390,423...29,411,308
JBrowse link
G TRIM28 tripartite motif containing 28 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr19:55,557,130...55,563,802
Ensembl chr19:64,371,477...64,377,144
JBrowse link
G TRIM32 tripartite motif containing 32 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 9:87,819,723...87,838,684
Ensembl chr 9:116,183,746...116,185,707
JBrowse link
G TRIM35 tripartite motif containing 35 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 8:26,554,217...26,580,684
Ensembl chr 8:23,757,009...23,783,457
JBrowse link
G TRIM5 tripartite motif containing 5 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr11:5,798,336...5,819,876
Ensembl chr11:5,479,033...5,500,758
JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 7:93,225,830...93,231,127
Ensembl chr 7:106,469,474...106,471,741
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chr10:99,242,187...99,256,342
Ensembl chr10:102,707,199...102,720,565
JBrowse link
negative stranded viral RNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG16L1 autophagy related 16 like 1 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr2B:120,479,534...120,523,563
Ensembl chr2B:239,392,990...239,436,766
JBrowse link
G ATG16L2 autophagy related 16 like 2 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr11:67,893,365...67,921,794
Ensembl chr11:71,115,768...71,131,081
JBrowse link
G ATG5 autophagy related 5 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr 6:103,997,824...104,140,931
Ensembl chr 6:107,871,208...108,013,807
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984
JBrowse link
G PPIB peptidylprolyl isomerase B involved_in ISO (PMID:15989969) AgBase PMID:15989969 NCBI chr15:43,108,139...43,115,470
Ensembl chr15:61,400,272...61,406,758
JBrowse link
G STOM stomatin involved_in ISO (MGI:5616479|PMID:25262680) AgBase PMID:25262680 MGI:5616479 NCBI chr 9:92,466,718...92,498,265
Ensembl chr 9:120,812,065...120,843,497
JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in ISO (PMID:17686842) AgBase PMID:17686842 NCBI chr20:644,646...670,860
Ensembl chr20:414,066...431,032
JBrowse link
G VAPA VAMP associated protein A involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
G YTHDC2 YTH domain containing 2 involved_in ISO (PMID:21559518) AgBase PMID:21559518 NCBI chr 5:108,870,417...108,951,848
Ensembl chr 5:114,672,839...114,754,153
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV2 caveolin 2 involved_in ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 7:108,254,074...108,480,716
Ensembl chr 7:121,168,579...121,177,415
JBrowse link
G PC pyruvate carboxylase involved_in ISO (PMID:23861867) AgBase PMID:23861867 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396
JBrowse link
G VAPA VAMP associated protein A involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
G ZNF502 zinc finger protein 502 involved_in ISO (PMID:25556234) AgBase PMID:25556234 NCBI chr 3:44,607,484...44,618,977
Ensembl chr 3:45,665,147...45,676,361
JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMR1 FMRP translational regulator 1 involved_in ISO (PMID:24514761) UniProt PMID:24514761 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOP2A DNA topoisomerase II alpha involved_in ISO (PMID:16712776) UniProt PMID:16712776 NCBI chr17:16,872,169...16,901,605
Ensembl chr17:17,097,778...17,126,207
JBrowse link
G TOP2B DNA topoisomerase II beta involved_in ISO (PMID:16712776) UniProt PMID:16712776 NCBI chr 3:25,499,239...25,566,029
Ensembl chr 3:25,828,879...25,896,912
JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSG101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) UniProt PMID:11595185 PMID:15218037 NCBI chr11:18,518,110...18,564,814
Ensembl chr11:18,189,868...18,248,149
JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in ISO (PMID:15218037) UniProt PMID:15218037 NCBI chr12:120,469,840...120,500,394
Ensembl chr12:124,703,077...124,733,889
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chr16:49,685,827...49,699,542 JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD4 CD4 molecule involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chr12:6,920,587...6,951,814
Ensembl chr12:6,834,011...6,864,204
JBrowse link
G CD74 CD74 molecule involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334
JBrowse link
G LGALS1 galectin 1 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr22:18,593,154...18,597,432
Ensembl chr22:36,426,228...36,430,356
JBrowse link
G LGALS9 galectin 9 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr17:29,125,460...29,145,028
Ensembl chr17:29,623,398...29,642,959
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) AgBase PMID:11277703 NCBI chr11:114,497,177...114,565,338
Ensembl chr11:118,401,321...118,493,090
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chr17:76,248,252...76,266,152
Ensembl chr17:81,950,422...81,968,109
JBrowse link
G TMPRSS2 transmembrane serine protease 2 involved_in ISO (PMID:21068237), (PMID:24227843), (PMID:32404436) UniProt PMID:21068237 PMID:24227843 PMID:32404436 NCBI chr21:27,800,466...27,843,395
Ensembl chr21:41,131,515...41,161,088
JBrowse link
G TMPRSS4 transmembrane serine protease 4 involved_in ISO (PMID:32404436) UniProt PMID:32404436 NCBI chr11:112,910,223...112,953,677
Ensembl chr11:116,843,287...116,884,767
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chr 1:203,795,924...203,809,703
Ensembl chr 1:209,006,979...209,019,994
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr11:4,588,083...4,596,942
Ensembl chr11:4,254,152...4,262,981
JBrowse link
G TRIM38 tripartite motif containing 38 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:25,796,278...25,818,610
Ensembl chr 6:26,454,051...26,475,842
JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in ISO (PMID:19651874)
(MGI:5447606|PMID:18362360)
(PMID:18362360)
UniProt PMID:18362360 PMID:19651874 MGI:5447606 NCBI chr 1:129,937,993...129,983,747 JBrowse link
G ADARB1 adenosine deaminase RNA specific B1 involved_in ISO (PMID:21289159) UniProt PMID:21289159 NCBI chr21:31,374,841...31,532,721
Ensembl chr21:44,715,931...44,815,748
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:23386060) UniProt PMID:23386060 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in ISO (PMID:23137809) AgBase PMID:23137809 NCBI chr11:56,599,422...56,633,140
Ensembl chr11:59,964,235...59,997,805
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in ISO (PMID:20862261) AgBase PMID:20862261 NCBI chr  X:33,780,381...33,796,829
Ensembl chr  X:41,475,116...41,505,837
JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) involved_in ISO (PMID:26567527) AgBase PMID:26567527 Ensembl chr 7:80,481,443...80,511,813 JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO (PMID:18160438) AgBase PMID:18160438 NCBI chr15:44,473,542...44,520,885
Ensembl chr15:62,752,762...62,799,950
JBrowse link
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 involved_in ISO (PMID:19416887) BHF-UCL PMID:19416887 NCBI chr10:86,117,807...86,129,256
Ensembl chr10:89,667,149...89,668,579
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chr 5:150,086,829...150,221,401
Ensembl chr 5:156,112,358...156,216,706
JBrowse link
G NOTCH1 notch receptor 1 involved_in ISO (MGI:5693363|PMID:21191019) AgBase PMID:21191019 MGI:5693363 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740
JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in ISO (PMID:19264593) BHF-UCL PMID:19264593 NCBI chr 1:175,625,140...175,775,955
Ensembl chr 1:179,934,573...180,083,607
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chr 8:97,346,433...97,365,628
Ensembl chr 8:99,518,347...99,537,614
JBrowse link
G PDE12 phosphodiesterase 12 involved_in ISO (PMID:15231837) UniProt PMID:15231837 NCBI chr 3:57,489,602...57,502,240
Ensembl chr 3:58,696,083...58,699,719
JBrowse link
G PKN2 protein kinase N2 involved_in ISO (PMID:15364941) AgBase PMID:15364941 NCBI chr 1:91,395,885...91,551,347
Ensembl chr 1:90,202,299...90,302,741
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha acts_upstream_of_or_within ISO (PMID:22479552) ARUK-UCL PMID:22479552 Ensembl chr22:45,218,364...45,302,970 JBrowse link
G PPIA peptidylprolyl isomerase A involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chr 7:45,510,450...45,515,448
Ensembl chr 7:45,578,765...45,605,545
JBrowse link
G PPID peptidylprolyl isomerase D involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chr 4:151,029,144...151,043,151
Ensembl chr 4:162,839,247...162,853,245
JBrowse link
G PPIE peptidylprolyl isomerase E involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chr 1:39,029,412...39,054,500
Ensembl chr 1:40,355,598...40,380,472
JBrowse link
G PPIH peptidylprolyl isomerase H involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chr 1:41,958,260...41,981,598
Ensembl chr 1:43,336,039...43,353,898
JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:20614012) UniProt PMID:20614012 NCBI chr19:12,508,232...12,516,068
Ensembl chr19:13,250,718...13,258,482
JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in ISO (PMID:20498328) BHF-UCL PMID:20498328 NCBI chr 6:35,393,290...35,480,530
Ensembl chr 6:36,598,552...36,683,257
JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in ISO (PMID:20498328) BHF-UCL PMID:20498328 NCBI chr 7:97,102,226...97,378,773
Ensembl chr 7:109,834,478...109,989,050
JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 involved_in ISO (PMID:23907398) AgBase PMID:23907398 NCBI chr20:45,452,639...45,526,512
Ensembl chr20:46,517,772...46,578,024
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:11641396) UniProt PMID:11641396 NCBI chr12:35,246,937...35,253,378
Ensembl chr12:36,031,818...36,038,008
JBrowse link
G TMEM39A transmembrane protein 39A involved_in ISO (PMID:31849860) UniProt PMID:31849860 NCBI chr 3:116,549,308...116,586,260
Ensembl chr 3:123,461,860...123,498,656
JBrowse link
G TRIM38 tripartite motif containing 38 acts_upstream_of_or_within ISO (MGI:5441682|PMID:22539786) MGI PMID:22539786 MGI:5441682 NCBI chr 6:25,796,278...25,818,610
Ensembl chr 6:26,454,051...26,475,842
JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:16227268) UniProt PMID:16227268 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363
JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in ISO (PMID:25593157) AgBase PMID:25593157 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in ISO (PMID:22673088) FlyBase PMID:22673088 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747
JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in ISO (PMID:22673088) FlyBase PMID:22673088 NCBI chr19:7,015,848...7,019,396
Ensembl chr19:7,870,730...7,873,631
JBrowse link
G KPNA2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chr17:61,968,807...61,979,954
Ensembl chr17:67,161,908...67,173,410
JBrowse link
G KPNA6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chr 1:31,394,159...31,462,821
Ensembl chr 1:32,406,326...32,471,488
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in ISO (PMID:22673088) FlyBase PMID:22673088 NCBI chr15:20,499,789...20,520,152
Ensembl chr15:38,739,509...38,760,288
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chr16:49,685,827...49,699,542 JBrowse link
positive regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP2A charged multivesicular body protein 2A involved_in ISO (PMID:23051622) UniProt PMID:23051622 NCBI chr19:55,564,622...55,568,214
Ensembl chr19:64,377,986...64,381,417
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in ISO (PMID:23051622) UniProt PMID:23051622 NCBI chr 3:87,358,297...87,386,556
Ensembl chr 3:89,471,993...89,501,241
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in ISO (PMID:23137809) AgBase PMID:23137809 NCBI chr11:56,599,422...56,633,140
Ensembl chr11:59,964,235...59,997,805
JBrowse link
G LOC100970314 charged multivesicular body protein 3 involved_in ISO (PMID:23051622) UniProt PMID:23051622 NCBI chr2A:86,559,695...86,619,615
Ensembl chr2A:88,106,242...88,165,104
JBrowse link
G TSG101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) UniProt PMID:11595185 PMID:15218037 NCBI chr11:18,518,110...18,564,814
Ensembl chr11:18,189,868...18,248,149
JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in ISO (PMID:15218037) UniProt PMID:15218037 NCBI chr12:120,469,840...120,500,394
Ensembl chr12:124,703,077...124,733,889
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chr16:49,685,827...49,699,542 JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chr 7:108,497,125...108,533,090
Ensembl chr 7:121,193,424...121,229,655
JBrowse link
G CAV2 caveolin 2 involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chr 7:108,254,074...108,480,716
Ensembl chr 7:121,168,579...121,177,415
JBrowse link
G CTSL cathepsin L involved_in ISO (PMID:16081529), (PMID:32221306), (PMID:32855215) UniProt PMID:16081529 PMID:32221306 PMID:32855215 NCBI chr 9:58,851,899...58,857,170
Ensembl chr 9:86,903,006...86,908,303
JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chr 1:50,598,692...50,763,585
Ensembl chr 1:52,097,387...52,223,533
JBrowse link
G KIAA0319L KIAA0319 like acts_upstream_of_or_within ISO (MGI:5750797|PMID:26814968) MGI PMID:26814968 MGI:5750797 NCBI chr 1:34,701,571...34,825,628
Ensembl chr 1:35,879,029...36,002,516
JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:32221306) UniProt PMID:32221306 NCBI chr2B:95,505,376...95,597,792
Ensembl chr2B:213,628,997...213,721,299
JBrowse link
G TPCN2 two pore segment channel 2 involved_in ISO (PMID:32221306) UniProt PMID:32221306 NCBI chr11:64,139,512...64,227,913 JBrowse link
receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in ISO (PMID:18343844), (PMID:32221306) BHF-UCL PMID:18343844 PMID:32221306 NCBI chr  X:8,189,267...8,229,415
Ensembl chr  X:15,470,896...15,510,891
JBrowse link
G ICAM1 intercellular adhesion molecule 1 involved_in ISO (PMID:2538243) BHF-UCL PMID:2538243 NCBI chr19:9,821,402...9,837,021
Ensembl chr19:10,484,414...10,500,605
JBrowse link
G LRRC15 leucine rich repeat containing 15 involved_in ISO (PMID:18385238) UniProt PMID:18385238 NCBI chr 3:191,655,181...191,666,727
Ensembl chr 3:201,970,221...201,974,286
JBrowse link
regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCL8 C-X-C motif chemokine ligand 8 involved_in ISO (PMID:11483765) UniProt PMID:11483765 NCBI chr 4:50,452,857...50,456,015
Ensembl chr 4:56,286,708...56,288,083
JBrowse link
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNF8 SNF8 subunit of ESCRT-II involved_in ISO (PMID:22978549) UniProt PMID:22978549 NCBI chr17:8,595,647...8,609,730
Ensembl chr17:8,578,050...8,794,480
JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in ISO (PMID:12138164) UniProt PMID:12138164 NCBI chr 6:111,846,143...112,132,706
Ensembl chr 6:115,917,004...116,089,942
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in ISO (PMID:11602758) CACAO PMID:11602758 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr17:50,965,592...50,991,630
Ensembl chr17:55,826,458...55,852,422
JBrowse link
G TRIM62 tripartite motif containing 62 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:32,429,824...32,467,185
Ensembl chr 1:33,614,555...33,650,859
JBrowse link
regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in ISO (MGI:3700400|PMID:16950491) UniProt PMID:16950491 MGI:3700400 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100
JBrowse link
G DDX5 DEAD-box helicase 5 ISO RGD PMID:19224332 RGD:5128521 NCBI chr17:58,594,956...58,603,570
Ensembl chr17:63,689,082...63,696,142
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940
JBrowse link
G PPIA peptidylprolyl isomerase A involved_in ISO (PMID:11250896) UniProt PMID:11250896 NCBI chr 7:45,510,450...45,515,448
Ensembl chr 7:45,578,765...45,605,545
JBrowse link
regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H acts_upstream_of_or_within ISO (MGI:54738|PMID:293683) MGI PMID:293683 MGI:54738 NCBI chr22:20,003,585...20,010,741
Ensembl chr22:37,821,315...37,828,153
JBrowse link
G LAMP3 lysosomal associated membrane protein 3 involved_in ISO (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chr 3:180,152,363...180,193,223
Ensembl chr 3:188,324,660...188,363,268
JBrowse link
regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRIM25 tripartite motif containing 25 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr17:50,965,592...50,991,630
Ensembl chr17:55,826,458...55,852,422
JBrowse link
G TRIM31 tripartite motif containing 31 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:29,880,668...29,890,905
Ensembl chr 6:30,550,802...30,560,977
JBrowse link
G TRIM62 tripartite motif containing 62 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:32,429,824...32,467,185
Ensembl chr 1:33,614,555...33,650,859
JBrowse link
G TSG101 tumor susceptibility 101 NOT|involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chr11:18,518,110...18,564,814
Ensembl chr11:18,189,868...18,248,149
JBrowse link
single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within ISO (PMID:14963118) MGI PMID:14963118 NCBI chr22:4,542,764...4,589,461
Ensembl chr22:22,627,982...22,673,921
JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP4B charged multivesicular body protein 4B involved_in ISO (PMID:17701905) UniProt PMID:17701905 NCBI chr20:30,098,796...30,146,347
Ensembl chr20:31,236,778...31,285,264
JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in ISO (PMID:15644320) UniProt PMID:15644320 NCBI chr 9:33,043,148...33,059,564
Ensembl chr 9:33,851,377...33,867,942
JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:15256501) UniProt PMID:15256501 NCBI chr 9:98,571,796...98,623,581
Ensembl chr 9:127,245,508...127,297,645
JBrowse link
G MVB12A multivesicular body subunit 12A involved_in ISO (PMID:18005716) UniProt PMID:18005716 NCBI chr19:16,906,449...16,911,717
Ensembl chr19:17,880,073...17,894,044
JBrowse link
G MVB12B multivesicular body subunit 12B involved_in ISO (PMID:18005716) UniProt PMID:18005716 NCBI chr 9:97,444,439...97,624,085
Ensembl chr 9:125,953,845...126,133,369
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of ISO (PMID:15126635) BHF-UCL PMID:15126635 NCBI chr15:34,798,880...34,963,823
Ensembl chr15:53,118,411...53,283,076
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (PMID:18641129) UniProt PMID:18641129 NCBI chr 3:33,719,603...33,793,301
Ensembl chr 3:34,016,474...34,093,631
JBrowse link
G TSG101 tumor susceptibility 101 involved_in ISO (PMID:15126635), (PMID:18005716)
(MGI:3850622|PMID:15256501)
BHF-UCL
UniProt
PMID:15126635 PMID:15256501 PMID:18005716 MGI:3850622 NCBI chr11:18,518,110...18,564,814
Ensembl chr11:18,189,868...18,248,149
JBrowse link
G VTA1 vesicle trafficking 1 involved_in ISO (PMID:15644320) UniProt PMID:15644320 NCBI chr 6:139,914,978...139,988,419
Ensembl chr 6:143,988,724...144,061,746
JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP2A charged multivesicular body protein 2A involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr19:55,564,622...55,568,214
Ensembl chr19:64,377,986...64,381,417
JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr20:30,098,796...30,146,347
Ensembl chr20:31,236,778...31,285,264
JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr 8:78,259,783...78,286,807
Ensembl chr 8:79,879,716...79,906,852
JBrowse link
G LOC100970314 charged multivesicular body protein 3 involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chr2A:86,559,695...86,619,615
Ensembl chr2A:88,106,242...88,165,104
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:16193069), (PMID:17940959) UniProt PMID:16193069 PMID:17940959 NCBI chr16:49,685,827...49,699,542 JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in ISO (PMID:14505570), (PMID:16193069), (PMID:17940959) UniProt PMID:14505570 PMID:16193069 PMID:17940959 NCBI chr18:56,749,439...56,782,660
Ensembl chr18:60,060,285...60,095,109
JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP1B charged multivesicular body protein 1B involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chr18:2,452,393...2,455,509 JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in ISO (PMID:23051622)
(PMID:24107264)
(PMID:24878737)
UniProt PMID:23051622 PMID:24107264 PMID:24878737 NCBI chr19:55,564,622...55,568,214
Ensembl chr19:64,377,986...64,381,417
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in ISO (PMID:24107264)
(PMID:23051622)
(PMID:24878737)
UniProt PMID:23051622 PMID:24107264 PMID:24878737 NCBI chr 3:87,358,297...87,386,556
Ensembl chr 3:89,471,993...89,501,241
JBrowse link
G CHMP4A charged multivesicular body protein 4A involved_in ISO (PMID:24107264)
(PMID:24878737)
UniProt PMID:24107264 PMID:24878737 NCBI chr14:4,985,642...4,989,985 JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in ISO (PMID:24878737)
(PMID:24107264)
UniProt PMID:24107264 PMID:24878737 NCBI chr20:30,098,796...30,146,347
Ensembl chr20:31,236,778...31,285,264
JBrowse link
G CHMP6 charged multivesicular body protein 6 involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chr17:75,415,055...75,423,279
Ensembl chr17:81,144,837...81,151,962
JBrowse link
G LOC100970314 charged multivesicular body protein 3 involved_in ISO (PMID:24878737)
(PMID:16740483), (PMID:23051622)
UniProt PMID:16740483 PMID:23051622 PMID:24878737 NCBI chr2A:86,559,695...86,619,615
Ensembl chr2A:88,106,242...88,165,104
JBrowse link
G MITD1 microtubule interacting and trafficking domain containing 1 NOT|involved_in ISO (PMID:23045692) UniProt PMID:23045692 NCBI chr2A:100,116,263...100,130,580
Ensembl chr2A:100,097,758...100,111,589
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in ISO (PMID:24107264) UniProt PMID:24107264 NCBI chr 3:33,719,603...33,793,301
Ensembl chr 3:34,016,474...34,093,631
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (PMID:24107264) UniProt PMID:24107264 NCBI chr16:49,685,827...49,699,542 JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in ISO (PMID:24107264) UniProt PMID:24107264 NCBI chr18:56,749,439...56,782,660
Ensembl chr18:60,060,285...60,095,109
JBrowse link
viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in ISO (PMID:16051304), (PMID:32221306), (PMID:33000221), (PMID:33082294), (PMID:33713620) UniProt PMID:16051304 PMID:32221306 PMID:33000221 PMID:33082294 PMID:33713620 NCBI chr  X:8,189,267...8,229,415
Ensembl chr  X:15,470,896...15,510,891
JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in ISO (PMID:33713620) UniProt PMID:33713620 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380
JBrowse link
G AVP arginine vasopressin involved_in ISO (PMID:33713620) UniProt PMID:33713620 NCBI chr20:3,169,094...3,172,900 JBrowse link
G AVPR1B arginine vasopressin receptor 1B involved_in ISO (PMID:33713620) UniProt PMID:33713620 NCBI chr 1:181,713,548...181,723,645
Ensembl chr 1:185,999,627...186,007,043
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:49235|PMID:1719235) MGI PMID:1719235 MGI:49235 NCBI chr19:39,395,550...39,417,063
Ensembl chr19:47,989,430...48,008,739
JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in ISO (PMID:16051304), (PMID:24623090) FlyBase PMID:16051304 PMID:24623090 NCBI chr19:7,015,848...7,019,396
Ensembl chr19:7,870,730...7,873,631
JBrowse link
G CTSB cathepsin B involved_in ISO (MGI:5640952|PMID:15831716) CACAO PMID:15831716 MGI:5640952 NCBI chr 8:7,333,498...7,359,264 JBrowse link
G CTSL cathepsin L involved_in ISO (PMID:16339146), (PMID:18562523), (PMID:26953343), (PMID:32855215) UniProt PMID:16339146 PMID:18562523 PMID:26953343 PMID:32855215 NCBI chr 9:58,851,899...58,857,170
Ensembl chr 9:86,903,006...86,908,303
JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) CACAO PMID:20202662 NCBI chr 1:50,598,692...50,763,585
Ensembl chr 1:52,097,387...52,223,533
JBrowse link
G GPR15 G protein-coupled receptor 15 involved_in ISO (PMID:15650194) UniProt PMID:15650194 NCBI chr 3:95,627,750...95,630,518
Ensembl chr 3:102,311,203...102,312,285
JBrowse link
G GRK2 G protein-coupled receptor kinase 2 involved_in ISO (PMID:23029581) CACAO PMID:23029581 NCBI chr11:62,624,647...62,644,846
Ensembl chr11:65,939,164...65,959,066
JBrowse link
G HYAL2 hyaluronidase 2 ISO facilitates RGD PMID:12584308 RGD:633153 NCBI chr 3:50,243,926...50,248,972
Ensembl chr 3:51,479,020...51,482,551
JBrowse link
G ITGAV integrin subunit alpha V involved_in ISO (PMID:25063885) UniProt PMID:25063885 NCBI chr2B:73,880,962...73,972,486
Ensembl chr2B:191,680,655...191,773,028
JBrowse link
G ITGB3 integrin subunit beta 3 involved_in ISO (PMID:25063885) UniProt PMID:25063885 NCBI chr17:10,134,450...10,194,596 JBrowse link
G LAMP3 lysosomal associated membrane protein 3 NOT|involved_in ISO (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chr 3:180,152,363...180,193,223
Ensembl chr 3:188,324,660...188,363,268
JBrowse link
G LOC100978434 C-type lectin domain family 4 member M involved_in ISO (PMID:24623090) FlyBase PMID:24623090 NCBI chr19:7,062,961...7,069,381 JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 ISO RGD PMID:12584355 RGD:1599797 NCBI chr11:114,497,177...114,565,338
Ensembl chr11:118,401,321...118,493,090
JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:21866101), (PMID:21866103)
(MGI:5289741|PMID:21866103), (MGI:5619456|PMID:21866101)
CACAO PMID:21866101 PMID:21866103 MGI:5289741 MGI:5619456 NCBI chr18:16,783,096...16,838,301
Ensembl chr18:20,409,040...20,463,623
JBrowse link
G NRP1 neuropilin 1 involved_in ISO (PMID:33000221), (PMID:33082294) UniProt PMID:33000221 PMID:33082294 NCBI chr10:33,298,918...33,456,466
Ensembl chr10:33,883,173...34,039,648
JBrowse link
G PHB prohibitin involved_in ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chr17:8,189,555...8,200,491
Ensembl chr17:8,175,968...8,186,790
JBrowse link
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) AgBase PMID:12857889 NCBI chr20:3,769,118...3,795,678
Ensembl chr20:3,526,791...3,552,309
JBrowse link
G SLC3A2 solute carrier family 3 member 2 involved_in ISO (PMID:30341327) UniProt PMID:30341327 NCBI chr11:58,212,395...58,241,686
Ensembl chr11:61,565,680...61,594,579
JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:22573858) UniProt PMID:22573858 NCBI chr11:6,521,812...6,526,349 JBrowse link
G UVRAG UV radiation resistance associated acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr11:70,870,341...71,197,559
Ensembl chr11:74,172,919...74,496,046
JBrowse link
G VAMP8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:24550300) MGI PMID:24550300 NCBI chr2A:85,627,678...85,632,205
Ensembl chr2A:87,180,681...87,185,195
JBrowse link
G VPS16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr20:2,931,553...2,956,604
Ensembl chr20:2,695,335...2,720,030
JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr15:19,836,707...19,846,231
Ensembl chr15:38,086,518...38,095,835
JBrowse link
G ZNF639 zinc finger protein 639 involved_in ISO (PMID:20484494) UniProt PMID:20484494 NCBI chr 3:176,353,400...176,366,142
Ensembl chr 3:184,533,061...184,539,270
JBrowse link
viral exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ADP ribosylation factor like GTPase 8B involved_in ISO (PMID:33157038)
(MGI:6508519|PMID:33157038)
UniProt PMID:33157038 MGI:6508519 NCBI chr 3:5,069,592...5,127,301
Ensembl chr 3:5,169,950...5,225,543
JBrowse link
viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRK2 G protein-coupled receptor kinase 2 involved_in ISO (PMID:23029581) CACAO PMID:23029581 NCBI chr11:62,624,647...62,644,846
Ensembl chr11:65,939,164...65,959,066
JBrowse link
G KPNA6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564) MGI PMID:28189564 MGI:5898166 NCBI chr 1:31,394,159...31,462,821
Ensembl chr 1:32,406,326...32,471,488
JBrowse link
G VCP valosin containing protein involved_in ISO (PMID:22379090) CACAO PMID:22379090 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588
JBrowse link
viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IST1 IST1 factor associated with ESCRT-III involved_in ISO (PMID:19129479) UniProt PMID:19129479 NCBI chr16:53,082,530...53,115,965
Ensembl chr16:71,733,302...71,765,969
JBrowse link
G RAB7A RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) CACAO PMID:22072966 NCBI chr 3:125,784,604...125,873,051 JBrowse link
viral replication complex formation and maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PI4KA phosphatidylinositol 4-kinase alpha involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chr22:2,931,523...3,082,475 JBrowse link
viral RNA genome packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX6 DEAD-box helicase 6 involved_in ISO (PMID:22022269) CACAO PMID:22022269 NCBI chr11:113,587,220...113,630,995
Ensembl chr11:117,515,778...117,559,364
JBrowse link
G PC pyruvate carboxylase involved_in ISO (PMID:23861867) AgBase PMID:23861867 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396
JBrowse link
viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDC42 cell division cycle 42 involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chr 1:21,245,970...21,286,210 JBrowse link
G EEA1 early endosome antigen 1 involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chr12:90,299,582...90,457,109
Ensembl chr12:93,611,628...93,767,583
JBrowse link
G PCBP1 poly(rC) binding protein 1 involved_in ISO (PMID:12414943) UniProt PMID:12414943 NCBI chr2A:70,144,217...70,145,938
Ensembl chr2A:71,258,331...71,261,658
JBrowse link
G PCBP2 poly(rC) binding protein 2 involved_in ISO (PMID:12414943) UniProt PMID:12414943 NCBI chr12:35,273,540...35,301,292 JBrowse link
G PI4KA phosphatidylinositol 4-kinase alpha involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chr22:2,931,523...3,082,475 JBrowse link
G PIK3C2G phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chr12:18,258,487...18,644,464
Ensembl chr12:18,664,631...19,030,493
JBrowse link
G RAB29 RAB29, member RAS oncogene family involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chr 1:181,377,018...181,384,496
Ensembl chr 1:185,661,317...185,668,066
JBrowse link
G RAB5A RAB5A, member RAS oncogene family involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chr 3:19,866,110...19,903,701
Ensembl chr 3:20,197,067...20,234,579
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chr2A:11,167,353...11,331,339
Ensembl chr2A:11,318,370...11,478,986
JBrowse link
virion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in ISO (PMID:25122793) AgBase PMID:25122793 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G RAB1A RAB1A, member RAS oncogene family involved_in ISO (PMID:21680502) UniProt PMID:21680502 NCBI chr2A:65,149,922...65,193,305
Ensembl chr2A:66,274,809...66,318,290
JBrowse link
G RAB1B RAB1B, member RAS oncogene family involved_in
NOT|involved_in
ISO (PMID:21680502) UniProt PMID:21680502 NCBI chr11:61,634,017...61,642,945
Ensembl chr11:64,959,957...64,968,843
JBrowse link
G RAB43 RAB43, member RAS oncogene family involved_in ISO (PMID:21680502) UniProt PMID:21680502 NCBI chr 3:126,145,723...126,179,989
Ensembl chr 3:133,504,093...133,538,331
JBrowse link
G SPCS1 signal peptidase complex subunit 1 involved_in ISO (PMID:24009510), (PMID:29593046) UniProt PMID:24009510 PMID:29593046 NCBI chr 3:52,646,427...52,648,786
Ensembl chr 3:53,873,921...53,876,229
JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in ISO (PMID:21680502) UniProt PMID:21680502 NCBI chr20:644,646...670,860
Ensembl chr20:414,066...431,032
JBrowse link
G USP6NL USP6 N-terminal like involved_in ISO (PMID:21680502) UniProt PMID:21680502 NCBI chr10:11,470,413...11,542,608
Ensembl chr10:11,453,137...11,590,863
JBrowse link
virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSP90AB1 heat shock protein 90 alpha family class B member 1 involved_in ISO (PMID:24098578) CACAO PMID:24098578 NCBI chr 6:43,842,796...43,849,637
Ensembl chr 6:45,125,773...45,133,872
JBrowse link
virus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MVB12A multivesicular body subunit 12A involved_in ISO (PMID:18005716) UniProt PMID:18005716 NCBI chr19:16,906,449...16,911,717
Ensembl chr19:17,880,073...17,894,044
JBrowse link
G MVB12B multivesicular body subunit 12B involved_in ISO (PMID:18005716) UniProt PMID:18005716 NCBI chr 9:97,444,439...97,624,085
Ensembl chr 9:125,953,845...126,133,369
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12613
    viral process 303
      viral life cycle 227
        intracellular transport of virus + 7
        negative regulation of viral life cycle + 32
        positive regulation of viral life cycle + 30
        regulation of viral life cycle + 138
        viral entry into host cell + 71
        viral genome integration into host DNA 0
        viral genome replication + 112
        viral release from host cell + 35
        virion assembly + 30
        virion attachment to host cell + 5
        virus maturation + 2
paths to the root