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ONTOLOGY REPORT - ANNOTATIONS

Term:viral life cycle
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Accession:GO:0019058 term browser browse the term
Definition:A set of processes which all viruses follow to ensure survival; includes attachment and entry of the virus particle, decoding of genome information, translation of viral mRNA by host ribosomes, genome replication, and assembly and release of viral particles containing the genome.
Synonyms:narrow_synonym: viral assembly, maturation, egress, and release
 related_synonym: lytic viral life cycle;   viral infectious cycle;   viral replication
 alt_id: GO:0019067


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viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FURIN furin, paired basic amino acid cleaving enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:69,560,774...69,576,007
Ensembl chr15:88,763,269...88,774,023 		JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:48,480,607...48,943,331
Ensembl chr 9:74,745,761...75,220,502 		JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr20:3,769,118...3,795,678
Ensembl chr20:3,526,791...3,552,309 		JBrowse link
coreceptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NECTIN2 nectin cell adhesion molecule 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024 		JBrowse link
G PVR PVR cell adhesion molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:41,592,042...41,614,397
Ensembl chr19:50,196,980...50,217,006 		JBrowse link
endocytosis involved in viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JPT2 Jupiter microtubule associated homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:299,835...323,210
Ensembl chr16:1,733,188...1,754,175 		JBrowse link
G TPCN1 two pore segment channel 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:110,812,587...110,903,033
Ensembl chr12:114,209,638...114,286,443 		JBrowse link
G TPCN2 two pore segment channel 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:64,139,512...64,227,913
Ensembl chr11:67,438,635...67,478,106 		JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KPNA2 karyopherin subunit alpha 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28189564) MGI
Ensembl		 PMID:28189564 GO_REF:0000107 NCBI chr17:61,968,807...61,979,954
Ensembl chr17:67,161,908...67,173,410 		JBrowse link
G KPNA6 karyopherin subunit alpha 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28189564) MGI
Ensembl		 PMID:28189564 GO_REF:0000107 NCBI chr 1:31,394,159...31,462,821
Ensembl chr 1:32,406,326...32,471,488 		JBrowse link
entry receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:8,189,267...8,229,415
Ensembl chr  X:15,470,896...15,510,891 		JBrowse link
intracellular transport of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 involved_in ISO (PMID:25540360) AgBase PMID:25540360 NCBI chr 7:87,724,604...88,050,624
Ensembl chr 7:101,344,053...101,648,607 		JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFI27 interferon alpha inducible protein 27 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:74,742,775...74,748,820
Ensembl chr14:94,046,694...94,082,022 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984 		JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX56 DEAD-box helicase 56 acts_upstream_of_negative_effect
involved_in		 ISO
IEA		 (PMID:33109765) FlyBase
Ensembl		 PMID:33109765 GO_REF:0000107 NCBI chr 7:45,280,188...45,289,476
Ensembl chr 7:45,349,800...45,357,694 		JBrowse link
G FBXL2 F-box and leucine rich repeat protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:33,199,436...33,308,831
Ensembl chr 3:33,501,525...33,610,039 		JBrowse link
G FMR1 fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321 		JBrowse link
G PHB1 prohibitin 1 involved_in ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chr17:8,189,555...8,200,491
Ensembl chr17:8,175,968...8,186,790 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:25106914) AgBase PMID:25106914 NCBI chr20:33,224,200...33,282,018
Ensembl chr20:34,341,367...34,398,314 		JBrowse link
G TMEM41B transmembrane protein 41B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:9,410,997...9,445,831
Ensembl chr11:9,151,993...9,183,050 		JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363 		JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:20,003,585...20,010,741
Ensembl chr22:37,821,315...37,828,153 		JBrowse link
G CCL8 C-C motif chemokine ligand 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:22,468,080...22,470,443
Ensembl chr17:22,761,064...22,763,933 		JBrowse link
G CCNK cyclin K involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:80,105,372...80,136,511
Ensembl chr14:99,438,814...99,480,842 		JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:33,780,381...33,796,829
Ensembl chr  X:41,475,116...41,505,837 		JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chr15:18,871,867...18,973,380
Ensembl chr15:37,120,044...37,229,211 		JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770 		JBrowse link
G SMC5 structural maintenance of chromosomes 5 involved_in ISO (PMID:28095508) UniProt PMID:28095508 NCBI chr 9:54,446,863...54,543,249 JBrowse link
G SMC6 structural maintenance of chromosomes 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:17,648,371...17,735,910
Ensembl chr2A:17,776,276...17,854,052 		JBrowse link
G VAPA VAMP associated protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829 		JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363 		JBrowse link
G ZBED1 zinc finger BED-type containing 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr  X:2,441,985...2,444,069 JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556 		JBrowse link
negative regulation of fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CH25H cholesterol 25-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:85,930,638...85,932,065
Ensembl chr10:89,471,441...89,472,259 		JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST2 bone marrow stromal cell antigen 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:16,890,257...16,892,989
Ensembl chr19:17,863,991...17,866,728 		JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in ISO (PMID:20167191) AgBase PMID:20167191 NCBI chr21:27,756,768...27,795,307
Ensembl chr21:41,095,928...41,123,019 		JBrowse link
G TRIM15 tripartite motif containing 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,939,261...29,949,706
Ensembl chr 6:30,610,348...30,619,826 		JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:8,688,392...8,699,008
Ensembl chr12:8,904,273...8,913,917 		JBrowse link
G APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:19,866,522...19,872,836 JBrowse link
G APOBEC3B apolipoprotein B mRNA editing enzyme catalytic subunit 3B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:19,892,548...19,902,455
Ensembl chr22:37,711,588...37,721,265 		JBrowse link
G APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:19,924,116...19,930,771
Ensembl chr22:37,743,388...37,749,725 		JBrowse link
G APOBEC3D apolipoprotein B mRNA editing enzyme catalytic subunit 3D involved_in ISO (PMID:21835787) UniProt PMID:21835787 NCBI chr22:19,931,452...19,942,829 JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:19,977,184...19,994,769 JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr22:20,003,585...20,010,741
Ensembl chr22:37,821,315...37,828,153 		JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in ISO (PMID:17005673) UniProt PMID:17005673 NCBI chr12:22,954,946...23,096,623 JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:1,477,511...1,499,765
Ensembl chr17:1,377,312...1,399,373 		JBrowse link
G LOC100990514 DNA dC->dU-editing enzyme APOBEC-3F involved_in ISO (PMID:17121840), (PMID:21835787) UniProt PMID:17121840 PMID:21835787 NCBI chr22:19,950,036...19,966,002 JBrowse link
G MORC2 MORC family CW-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:11,912,043...11,995,497
Ensembl chr22:29,753,241...29,795,632 		JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:932,620...999,853
Ensembl chr13:19,278,149...19,316,389 		JBrowse link
G RESF1 retroelement silencing factor 1 involved_in ISO (MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:6271895 NCBI chr12:54,238,276...54,272,288
Ensembl chr12:56,829,272...56,863,359 		JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (MGI:5440670|PMID:20164836), (MGI:6271895|PMID:29728365) UniProt PMID:20164836 PMID:29728365 MGI:5440670 MGI:6271895 NCBI chr 1:126,275,719...126,314,043
Ensembl chr 1:129,925,009...129,962,442 		JBrowse link
G TASOR transcription activation suppressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:56,555,945...56,619,151
Ensembl chr 3:57,771,656...57,834,077 		JBrowse link
G TRIM28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19270682) Ensembl
MGI		 PMID:19270682 GO_REF:0000107 NCBI chr19:55,557,130...55,563,802
Ensembl chr19:64,371,477...64,377,144 		JBrowse link
G ZNF684 zinc finger protein 684 acts_upstream_of_or_within ISO (PMID:19270682) MGI PMID:19270682 NCBI chr 1:39,824,037...39,841,025
Ensembl chr 1:41,145,020...41,162,094 		JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:134,937,472...134,938,512
Ensembl chr 1:138,734,046...138,735,093 		JBrowse link
G CD74 CD74 molecule involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334 		JBrowse link
G CIITA class II major histocompatibility complex transactivator involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chr16:9,819,440...9,885,379
Ensembl chr16:11,041,434...11,090,485 		JBrowse link
G FCN3 ficolin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:26,620,373...26,636,424
Ensembl chr 1:27,676,866...27,683,861 		JBrowse link
G GSN gelsolin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,413,819...92,460,483
Ensembl chr 9:120,741,148...120,805,831 		JBrowse link
G IFITM1 interferon induced transmembrane protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25738301) Ensembl
MGI
TreeGrafter		 PMID:25738301 GO_REF:0000107 GO_REF:0000118 NCBI chr11:309,930...311,177
Ensembl chr11:353,236...354,986 		JBrowse link
G IFITM2 interferon induced transmembrane protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:304,068...305,273
Ensembl chr11:348,341...349,551 		JBrowse link
G LOC100971164 interferon-induced transmembrane protein 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:316,234...317,418 JBrowse link
G LOC100972354 interferon alpha-2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:21,245,017...21,246,210
Ensembl chr 9:21,863,062...21,863,736 		JBrowse link
G LRRC15 leucine rich repeat containing 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:191,655,181...191,666,727
Ensembl chr 3:201,970,221...201,974,286 		JBrowse link
G LY6E lymphocyte antigen 6 family member E involved_in ISO (MGI:6448667|PMID:32704094)
(PMID:32641482), (PMID:32704094)		 UniProt PMID:32641482 PMID:32704094 MGI:6448667
G MID2 midline 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:96,917,731...97,026,545
Ensembl chr  X:107,290,776...107,393,162 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr 8:86,622,797...86,674,202
Ensembl chr 8:88,575,198...88,626,307 		JBrowse link
G PTX3 pentraxin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:154,485,470...154,492,293
Ensembl chr 3:162,537,577...162,543,652 		JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr 5:127,972,630...128,059,911
Ensembl chr 5:134,134,495...134,222,261 		JBrowse link
G SNX3 sorting nexin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,010,633...106,063,331
Ensembl chr 6:109,874,105...109,924,185 		JBrowse link
G TRIM10 tripartite motif containing 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,929,516...29,938,355
Ensembl chr 6:30,601,812...30,608,082 		JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,795,924...203,809,703
Ensembl chr 1:209,006,979...209,019,994 		JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,965,592...50,991,630
Ensembl chr17:55,826,458...55,852,422 		JBrowse link
G TRIM26 tripartite motif containing 26 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:29,962,838...29,990,710
Ensembl chr 6:30,632,948...30,660,809 		JBrowse link
G TRIM31 tripartite motif containing 31 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:29,880,668...29,890,905
Ensembl chr 6:30,550,802...30,560,977 		JBrowse link
G TRIM5 tripartite motif containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:5,798,336...5,819,876
Ensembl chr11:5,479,033...5,500,758 		JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 7:93,225,830...93,231,127
Ensembl chr 7:106,469,474...106,471,741 		JBrowse link
G TRIM59 tripartite motif containing 59 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 3:157,458,982...157,471,521 JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:99,242,187...99,256,342
Ensembl chr10:102,707,199...102,720,565 		JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A involved_in ISO (PMID:16527742) UniProt PMID:16527742 NCBI chr22:19,866,522...19,872,836 JBrowse link
G APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:19,924,116...19,930,771
Ensembl chr22:37,743,388...37,749,725 		JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G involved_in ISO (PMID:16378963), (PMID:17121840) UniProt PMID:16378963 PMID:17121840 NCBI chr22:19,977,184...19,994,769 JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H involved_in ISO (MGI:5486557|PMID:16378963) UniProt PMID:16378963 MGI:5486557 NCBI chr22:20,003,585...20,010,741
Ensembl chr22:37,821,315...37,828,153 		JBrowse link
G BANF1 BAF nuclear assembly factor 1 involved_in ISO (PMID:18005698) UniProt PMID:18005698 NCBI chr11:61,366,480...61,368,547
Ensembl chr11:64,693,447...64,695,509 		JBrowse link
G BST2 bone marrow stromal cell antigen 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:16,890,257...16,892,989
Ensembl chr19:17,863,991...17,866,728 		JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:20,915,198...20,923,530
Ensembl chr17:21,210,798...21,219,172 		JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:37,130,386...37,184,587
Ensembl chr2A:37,895,814...37,941,686 		JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:54,359,711...54,372,132
Ensembl chr11:57,818,413...57,823,046 		JBrowse link
G IFI16 interferon gamma inducible protein 16 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:134,364,706...134,405,910
Ensembl chr 1:138,152,328...138,203,424 		JBrowse link
G IFIH1 interferon induced with helicase C domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:49,560,620...49,612,086
Ensembl chr2B:166,928,994...166,980,170 		JBrowse link
G IFIT5 interferon induced protein with tetratricopeptide repeats 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:86,139,816...86,146,244
Ensembl chr10:89,678,703...89,685,839 		JBrowse link
G IFITM1 interferon induced transmembrane protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:309,930...311,177
Ensembl chr11:353,236...354,986 		JBrowse link
G IFITM2 interferon induced transmembrane protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:304,068...305,273
Ensembl chr11:348,341...349,551 		JBrowse link
G IFNB1 interferon beta 1 involved_in ISO (PMID:19008854) BHF-UCL PMID:19008854 NCBI chr 9:20,884,742...20,886,317 JBrowse link
G ILF3 interleukin enhancer binding factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:10,206,636...10,244,779
Ensembl chr19:10,867,143...10,905,953 		JBrowse link
G ISG15 ISG15 ubiquitin like modifier involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 1:927,418...928,491 JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:67,328,334...67,345,085
Ensembl chr15:86,536,647...86,553,751 		JBrowse link
G LOC100971164 interferon-induced transmembrane protein 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:316,234...317,418 JBrowse link
G LOC100976728 interferon-induced protein with tetratricopeptide repeats 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:86,117,807...86,129,256
Ensembl chr10:89,667,149...89,668,579 		JBrowse link
G LOC100990514 DNA dC->dU-editing enzyme APOBEC-3F involved_in ISO (PMID:16378963), (PMID:17121840) BHF-UCL PMID:16378963 PMID:17121840 NCBI chr22:19,950,036...19,966,002 JBrowse link
G LTF lactotransferrin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:46,337,738...46,367,476
Ensembl chr 3:47,442,440...47,471,532 		JBrowse link
G MAVS mitochondrial antiviral signaling protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:3,885,044...3,903,554
Ensembl chr20:3,659,559...3,701,089 		JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:27,756,768...27,795,307
Ensembl chr21:41,095,928...41,123,019 		JBrowse link
G N4BP1 NEDD4 binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:28,809,881...28,881,352
Ensembl chr16:47,698,353...47,769,755 		JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 involved_in IEA
ISS		 Ensembl
TreeGrafter
UniProt		 GO_REF:0000024 GO_REF:0000107 GO_REF:0000118 NCBI chr12:110,511,984...110,525,343
Ensembl chr12:113,896,760...113,921,814 		JBrowse link
G OAS2 2'-5'-oligoadenylate synthetase 2 involved_in IEA TreeGrafter GO_REF:0000118
G OAS3 2'-5'-oligoadenylate synthetase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:110,543,522...110,578,463
Ensembl chr12:113,928,202...113,959,654
Ensembl chr12:113,928,202...113,959,654 		JBrowse link
G OASL 2'-5'-oligoadenylate synthetase like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr12:118,602,088...118,621,056
Ensembl chr12:121,971,880...121,990,855 		JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:143,528,967...143,558,468
Ensembl chr 3:151,112,483...151,132,964 		JBrowse link
G PROX1 prospero homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:189,556,124...189,609,297
Ensembl chr 1:194,412,980...194,460,763 		JBrowse link
G RNASEL ribonuclease L involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:158,092,346...158,108,026
Ensembl chr 1:161,741,645...161,760,045 		JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:6,873,821...6,906,087
Ensembl chr2A:7,021,937...7,042,961 		JBrowse link
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:9,634,718...9,641,824
Ensembl chr19:10,293,967...10,301,067 		JBrowse link
G SLPI secretory leukocyte peptidase inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:41,583,429...41,585,773
Ensembl chr20:42,673,417...42,675,773 		JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,393,290...35,480,530
Ensembl chr 6:36,598,552...36,683,257 		JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:97,102,226...97,378,773
Ensembl chr 7:109,834,478...109,989,050 		JBrowse link
G TNF tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381 		JBrowse link
G TRIM6 tripartite motif containing 6 involved_in ISO (PMID:24882218)
(MGI:5645191|PMID:24882218)		 UniProt PMID:24882218 MGI:5645191 NCBI chr11:5,731,256...5,748,057
Ensembl chr11:5,413,491...5,460,532 		JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:131,002,580...131,068,513
Ensembl chr 7:143,489,750...143,555,438 		JBrowse link
G ZNFX1 zinc finger NFX1-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:45,585,137...45,616,769
Ensembl chr20:46,642,081...46,681,289 		JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARK2N arkadia (RNF111) N-terminal like PKA signaling regulator 2N involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:39,455,256...39,548,926
Ensembl chr18:42,990,152...43,082,789 		JBrowse link
G CSNK2B casein kinase 2 beta involved_in ISO (PMID:31341047) UniProt PMID:31341047 NCBI chr 6:31,327,250...31,331,250 JBrowse link
G HMOX1 heme oxygenase 1 involved_in ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063 		JBrowse link
G IL32 interleukin 32 acts_upstream_of ISO (PMID:23729669) ARUK-UCL PMID:23729669 NCBI chr16:2,007,018...2,023,757
Ensembl chr16:3,179,637...3,203,929 		JBrowse link
G PPIA peptidylprolyl isomerase A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,510,450...45,515,448
Ensembl chr 7:45,578,765...45,605,545 		JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:25106914) AgBase PMID:25106914 NCBI chr20:33,224,200...33,282,018
Ensembl chr20:34,341,367...34,398,314 		JBrowse link
negative stranded viral RNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG16L1 autophagy related 16 like 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24550300) Ensembl
MGI
TreeGrafter		 PMID:24550300 GO_REF:0000107 GO_REF:0000118 NCBI chr2B:120,479,534...120,523,563
Ensembl chr2B:239,392,990...239,436,766 		JBrowse link
G ATG16L2 autophagy related 16 like 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24550300) Ensembl
MGI
TreeGrafter		 PMID:24550300 GO_REF:0000107 GO_REF:0000118 NCBI chr11:67,893,365...67,921,794
Ensembl chr11:71,115,768...71,131,081 		JBrowse link
G ATG5 autophagy related 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24550300) Ensembl
MGI		 PMID:24550300 GO_REF:0000107 NCBI chr 6:103,997,824...104,140,931
Ensembl chr 6:107,871,208...108,013,807 		JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:24550300) MGI PMID:24550300 NCBI chr 3:11,208,600...11,488,757
Ensembl chr 3:11,554,100...11,833,398 		JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EEF1A1 eukaryotic translation elongation factor 1 alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,342,291...71,346,033
Ensembl chr 6:74,629,688...74,633,754 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773 		JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:181,322,760...181,359,321
Ensembl chr 1:185,606,796...185,642,984 		JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:35,203,896...35,336,512
Ensembl chr18:38,754,789...38,882,037 		JBrowse link
G PPIB peptidylprolyl isomerase B involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:43,108,139...43,115,470
Ensembl chr15:61,400,272...61,406,758 		JBrowse link
G STOM stomatin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:92,466,718...92,498,265
Ensembl chr 9:120,812,065...120,843,497 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:644,646...670,860
Ensembl chr20:414,066...431,032 		JBrowse link
G VAPA VAMP associated protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829 		JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363 		JBrowse link
G YTHDC2 YTH N6-methyladenosine RNA binding protein C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:108,870,417...108,951,848
Ensembl chr 5:114,672,839...114,754,153 		JBrowse link
G ZFYVE1 zinc finger FYVE-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:53,550,688...53,608,297
Ensembl chr14:72,414,810...72,471,578 		JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMR1 fragile X messenger ribonucleoprotein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321 		JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOP2A DNA topoisomerase II alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:16,872,169...16,901,605
Ensembl chr17:17,097,778...17,126,207 		JBrowse link
G TOP2B DNA topoisomerase II beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:25,499,239...25,566,029
Ensembl chr 3:25,828,879...25,896,912 		JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSG101 tumor susceptibility 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:18,518,110...18,564,814
Ensembl chr11:18,189,868...18,248,149 		JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:120,469,840...120,500,394
Ensembl chr12:124,703,077...124,733,889 		JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:49,685,827...49,699,542
Ensembl chr16:69,074,091...69,085,714 		JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSG basigin (Ok blood group) involved_in ISO (PMID:11353871), (PMID:15688292)
(PMID:29739904)		 UniProt PMID:11353871 PMID:15688292 PMID:29739904 Ensembl chr19:539,815...551,456 JBrowse link
G CD4 CD4 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:6,920,587...6,951,814
Ensembl chr12:6,834,011...6,864,204 		JBrowse link
G CD74 CD74 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:145,825,635...145,836,916
Ensembl chr 5:151,830,311...151,841,334 		JBrowse link
G FURIN furin, paired basic amino acid cleaving enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:69,560,774...69,576,007
Ensembl chr15:88,763,269...88,774,023 		JBrowse link
G LGALS1 galectin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:18,593,154...18,597,432
Ensembl chr22:36,426,228...36,430,356 		JBrowse link
G LOC100977210 galectin-9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:29,125,460...29,145,028
Ensembl chr17:29,623,398...29,642,959 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) AgBase PMID:11277703 NCBI chr11:114,497,177...114,565,338
Ensembl chr11:118,401,321...118,493,090 		JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:76,248,252...76,266,152
Ensembl chr17:81,950,422...81,968,109 		JBrowse link
G TMPRSS2 transmembrane serine protease 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:27,800,466...27,843,395
Ensembl chr21:41,131,515...41,161,088 		JBrowse link
G TMPRSS4 transmembrane serine protease 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:112,910,223...112,953,677
Ensembl chr11:116,843,287...116,884,767 		JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:203,795,924...203,809,703
Ensembl chr 1:209,006,979...209,019,994 		JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:4,588,083...4,596,942
Ensembl chr11:4,254,152...4,262,981 		JBrowse link
G TRIM22 tripartite motif containing 22 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr11:5,824,176...5,844,990
Ensembl chr11:5,504,864...5,526,730 		JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:25,796,278...25,818,610
Ensembl chr 6:26,454,051...26,475,842 		JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in ISO (PMID:19651874)
(MGI:5447606|PMID:18362360)
(PMID:18362360)		 UniProt PMID:18362360 PMID:19651874 MGI:5447606 NCBI chr 1:129,937,993...129,983,747 JBrowse link
G ADARB1 adenosine deaminase RNA specific B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:31,374,841...31,532,721
Ensembl chr21:44,715,931...44,815,748 		JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:56,599,422...56,633,140
Ensembl chr11:59,964,235...59,997,805 		JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:33,780,381...33,796,829
Ensembl chr  X:41,475,116...41,505,837 		JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 7:80,481,443...80,511,813 JBrowse link
G GBP7 guanylate binding protein 7 involved_in ISO (PMID:33408175) UniProt PMID:33408175 NCBI chr 1:91,841,867...91,886,638
Ensembl chr 1:90,590,242...90,660,565 		JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:44,473,542...44,520,885
Ensembl chr15:62,752,762...62,799,950 		JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:150,086,829...150,221,401
Ensembl chr 5:156,112,358...156,216,706 		JBrowse link
G LOC100976728 interferon-induced protein with tetratricopeptide repeats 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:86,117,807...86,129,256
Ensembl chr10:89,667,149...89,668,579 		JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740 		JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:175,625,140...175,775,955
Ensembl chr 1:179,934,573...180,083,607 		JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chr 8:97,346,433...97,365,628
Ensembl chr 8:99,518,347...99,537,614 		JBrowse link
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:57,489,602...57,502,240
Ensembl chr 3:58,696,083...58,699,719 		JBrowse link
G PKN2 protein kinase N2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:91,395,885...91,551,347
Ensembl chr 1:90,202,299...90,302,741 		JBrowse link
G PPIA peptidylprolyl isomerase A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:45,510,450...45,515,448
Ensembl chr 7:45,578,765...45,605,545 		JBrowse link
G PPID peptidylprolyl isomerase D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:151,029,144...151,043,151
Ensembl chr 4:162,839,247...162,853,245 		JBrowse link
G PPIE peptidylprolyl isomerase E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:39,029,412...39,054,500
Ensembl chr 1:40,355,598...40,380,472 		JBrowse link
G PPIH peptidylprolyl isomerase H involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:41,958,260...41,981,598
Ensembl chr 1:43,336,039...43,353,898 		JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:12,508,232...12,516,068
Ensembl chr19:13,250,718...13,258,482 		JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:35,393,290...35,480,530
Ensembl chr 6:36,598,552...36,683,257 		JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:97,102,226...97,378,773
Ensembl chr 7:109,834,478...109,989,050 		JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:45,452,639...45,526,512
Ensembl chr20:46,517,772...46,578,024 		JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:35,246,937...35,253,378
Ensembl chr12:36,031,818...36,038,008 		JBrowse link
G TMEM39A transmembrane protein 39A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:116,549,308...116,586,260
Ensembl chr 3:123,461,860...123,498,656 		JBrowse link
G TRIM38 tripartite motif containing 38 acts_upstream_of_or_within ISO (PMID:22539786) MGI PMID:22539786 NCBI chr 6:25,796,278...25,818,610
Ensembl chr 6:26,454,051...26,475,842 		JBrowse link
G VAPB VAMP associated protein B and C involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363 		JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in ISO (PMID:25593157) AgBase PMID:25593157 NCBI chr15:39,322,303...39,371,565
Ensembl chr15:57,625,425...57,674,250 		JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747 		JBrowse link
G CD209 CD209 molecule involved_in ISO (PMID:22673088) FlyBase PMID:22673088 NCBI chr19:7,042,033...7,047,350 JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:7,015,848...7,019,396
Ensembl chr19:7,870,730...7,873,631 		JBrowse link
G KPNA2 karyopherin subunit alpha 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28189564) MGI
Ensembl		 PMID:28189564 GO_REF:0000107 NCBI chr17:61,968,807...61,979,954
Ensembl chr17:67,161,908...67,173,410 		JBrowse link
G KPNA6 karyopherin subunit alpha 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28189564) MGI
Ensembl		 PMID:28189564 GO_REF:0000107 NCBI chr 1:31,394,159...31,462,821
Ensembl chr 1:32,406,326...32,471,488 		JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:20,499,789...20,520,152
Ensembl chr15:38,739,509...38,760,288 		JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:108,497,125...108,533,090
Ensembl chr 7:121,193,424...121,229,655 		JBrowse link
G CAV2 caveolin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:108,254,074...108,480,716
Ensembl chr 7:121,168,579...121,177,415 		JBrowse link
G CTSL cathepsin L involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:58,851,899...58,857,170
Ensembl chr 9:86,903,006...86,908,303 		JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:50,598,692...50,763,585
Ensembl chr 1:52,097,387...52,223,533 		JBrowse link
G KIAA0319L KIAA0319 like acts_upstream_of_or_within ISO (PMID:26814968) MGI PMID:26814968 NCBI chr 1:34,701,571...34,825,628
Ensembl chr 1:35,879,029...36,002,516 		JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:95,505,376...95,597,792
Ensembl chr2B:213,628,997...213,721,299 		JBrowse link
G RNASEK ribonuclease K involved_in ISO (PMID:26212330) UniProt PMID:26212330 NCBI chr17:7,043,269...7,045,379
Ensembl chr17:7,031,283...7,033,393 		JBrowse link
G TPCN2 two pore segment channel 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:64,139,512...64,227,913
Ensembl chr11:67,438,635...67,478,106 		JBrowse link
receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:8,189,267...8,229,415
Ensembl chr  X:15,470,896...15,510,891 		JBrowse link
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr13:113,968,843...114,009,562 JBrowse link
G ICAM1 intercellular adhesion molecule 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:9,821,402...9,837,021
Ensembl chr19:10,484,414...10,500,605 		JBrowse link
G LOC100978434 C-type lectin domain family 4 member M involved_in ISO (PMID:15479853), (PMID:32766577) ComplexPortal PMID:15479853 PMID:32766577 NCBI chr19:7,062,961...7,069,381 JBrowse link
G LRRC15 leucine rich repeat containing 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:191,655,181...191,666,727
Ensembl chr 3:201,970,221...201,974,286 		JBrowse link
G TTC6 tetratricopeptide repeat domain 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr14:18,363,956...18,601,589
Ensembl chr14:36,740,892...36,962,078 		JBrowse link
regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:50,452,857...50,456,015
Ensembl chr 4:56,286,708...56,288,083 		JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:111,846,143...112,132,706
Ensembl chr 6:115,917,004...116,089,942 		JBrowse link
G LOC129392906 E3 ubiquitin-protein ligase TRIM58 involved_in IEA TreeGrafter GO_REF:0000118
G NECTIN2 nectin cell adhesion molecule 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:41,794,037...41,837,047
Ensembl chr19:50,399,668...50,443,024 		JBrowse link
G PVR PVR cell adhesion molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:41,592,042...41,614,397
Ensembl chr19:50,196,980...50,217,006 		JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:4,588,083...4,596,942
Ensembl chr11:4,254,152...4,262,981 		JBrowse link
G TRIM22 tripartite motif containing 22 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:5,824,176...5,844,990
Ensembl chr11:5,504,864...5,526,730 		JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,965,592...50,991,630
Ensembl chr17:55,826,458...55,852,422 		JBrowse link
G TRIM34 tripartite motif containing 34 involved_in IEA TreeGrafter GO_REF:0000118
G TRIM38 tripartite motif containing 38 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:25,796,278...25,818,610
Ensembl chr 6:26,454,051...26,475,842 		JBrowse link
G TRIM5 tripartite motif containing 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:5,798,336...5,819,876
Ensembl chr11:5,479,033...5,500,758 		JBrowse link
G TRIM6 tripartite motif containing 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr11:5,731,256...5,748,057
Ensembl chr11:5,413,491...5,460,532 		JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:32,429,824...32,467,185
Ensembl chr 1:33,614,555...33,650,859 		JBrowse link
regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G DDX5 DEAD-box helicase 5 ISO RGD PMID:19224332 RGD:5128521 NCBI chr17:58,594,956...58,603,570
Ensembl chr17:63,689,082...63,696,142 		JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (PMID:17613256) MGI PMID:17613256 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940 		JBrowse link
G PPIA peptidylprolyl isomerase A involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:45,510,450...45,515,448
Ensembl chr 7:45,578,765...45,605,545 		JBrowse link
regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H acts_upstream_of_or_within ISO (PMID:293683) MGI PMID:293683 NCBI chr22:20,003,585...20,010,741
Ensembl chr22:37,821,315...37,828,153 		JBrowse link
G LAMP3 lysosomal associated membrane protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:180,152,363...180,193,223
Ensembl chr 3:188,324,660...188,363,268 		JBrowse link
single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14963118) MGI
Ensembl		 PMID:14963118 GO_REF:0000107 NCBI chr22:4,542,764...4,589,461
Ensembl chr22:22,627,982...22,673,921 		JBrowse link
symbiont entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:33163980) Ensembl
UniProt		 PMID:33163980 GO_REF:0000107 NCBI chr  X:8,189,267...8,229,415
Ensembl chr  X:15,470,896...15,510,891 		JBrowse link
G AGTR1 angiotensin II receptor type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:145,722,475...145,767,550
Ensembl chr 3:153,341,947...153,345,380 		JBrowse link
G AVP arginine vasopressin involved_in ISO (PMID:33713620) UniProt PMID:33713620 NCBI chr20:3,169,094...3,172,900 JBrowse link
G AVPR1B arginine vasopressin receptor 1B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:181,713,548...181,723,645
Ensembl chr 1:185,999,627...186,007,043 		JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747 		JBrowse link
G CD209 CD209 molecule involved_in ISO (PMID:24623090) FlyBase PMID:24623090 NCBI chr19:7,042,033...7,047,350 JBrowse link
G CD81 CD81 molecule involved_in IEA GOC GO_REF:0000108 NCBI chr11:2,400,503...2,421,132
Ensembl chr11:2,437,991...2,449,308 		JBrowse link
G CLDN1 claudin 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:187,328,629...187,345,360
Ensembl chr 3:195,882,239...195,899,248 		JBrowse link
G CLDN9 claudin 9 involved_in IEA GOC GO_REF:0000108 NCBI chr16:1,953,439...1,956,349
Ensembl chr16:3,127,610...3,128,263 		JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:7,015,848...7,019,396
Ensembl chr19:7,870,730...7,873,631 		JBrowse link
G CLEC5A C-type lectin domain containing 5A involved_in IEA GOC GO_REF:0000108 NCBI chr 7:133,851,242...133,870,793
Ensembl chr 7:146,320,331...146,339,905 		JBrowse link
G CTSB cathepsin B involved_in ISO (MGI:5640952|PMID:15831716) CACAO PMID:15831716 MGI:5640952 NCBI chr 8:7,333,498...7,359,264 JBrowse link
G CTSL cathepsin L involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:58,851,899...58,857,170
Ensembl chr 9:86,903,006...86,908,303 		JBrowse link
G DAG1 dystroglycan 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:49,396,180...49,464,689
Ensembl chr 3:50,640,615...50,703,852 		JBrowse link
G DPP4 dipeptidyl peptidase 4 involved_in IEA GOC GO_REF:0000108 NCBI chr2B:49,285,685...49,368,056
Ensembl chr2B:166,654,659...166,736,588 		JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:50,598,692...50,763,585
Ensembl chr 1:52,097,387...52,223,533 		JBrowse link
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr13:113,968,843...114,009,562 JBrowse link
G GPR15 G protein-coupled receptor 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:95,627,750...95,630,518
Ensembl chr 3:102,311,203...102,312,285 		JBrowse link
G GRK2 G protein-coupled receptor kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,624,647...62,644,846
Ensembl chr11:65,939,164...65,959,066 		JBrowse link
G HYAL2 hyaluronidase 2 involved_in ISO
IEA		 facilitates RGD
GOC		 PMID:12584308 GO_REF:0000108 RGD:633153 NCBI chr 3:50,243,926...50,248,972
Ensembl chr 3:51,479,020...51,482,551 		JBrowse link
G ILF3 interleukin enhancer binding factor 3 involved_in IEA GOC GO_REF:0000108 NCBI chr19:10,206,636...10,244,779
Ensembl chr19:10,867,143...10,905,953 		JBrowse link
G INSR insulin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889 		JBrowse link
G ITGAV integrin subunit alpha V involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:73,880,962...73,972,486
Ensembl chr2B:191,680,655...191,773,028 		JBrowse link
G ITGB3 integrin subunit beta 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,134,450...10,194,596
Ensembl chr17:10,353,111...10,392,382 		JBrowse link
G LOC100978434 C-type lectin domain family 4 member M involved_in ISO (PMID:15479853), (PMID:24623090), (PMID:32766577) FlyBase PMID:15479853 PMID:24623090 PMID:32766577 NCBI chr19:7,062,961...7,069,381 JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 ISO RGD PMID:12584355 RGD:1599797 NCBI chr11:114,497,177...114,565,338
Ensembl chr11:118,401,321...118,493,090 		JBrowse link
G NECTIN3 nectin cell adhesion molecule 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:108,223,380...108,354,079
Ensembl chr 3:115,148,481...115,270,507 		JBrowse link
G NECTIN4 nectin cell adhesion molecule 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:136,484,235...136,502,478
Ensembl chr 1:140,397,817...140,414,897 		JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:16,783,096...16,838,301
Ensembl chr18:20,409,040...20,463,623 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:33,298,918...33,456,466
Ensembl chr10:33,883,173...34,039,648 		JBrowse link
G PHB1 prohibitin 1 involved_in ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chr17:8,189,555...8,200,491
Ensembl chr17:8,175,968...8,186,790 		JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 3:143,528,967...143,558,468
Ensembl chr 3:151,112,483...151,132,964 		JBrowse link
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) AgBase PMID:12857889 NCBI chr20:3,769,118...3,795,678
Ensembl chr20:3,526,791...3,552,309 		JBrowse link
G SIVA1 SIVA1 apoptosis inducing factor involved_in IEA GOC GO_REF:0000108 NCBI chr14:85,404,148...85,408,254
Ensembl chr14:105,196,118...105,202,678 		JBrowse link
G SLC20A2 solute carrier family 20 member 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:41,663,200...41,786,314
Ensembl chr 8:39,109,265...39,162,456 		JBrowse link
G SLC3A2 solute carrier family 3 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:58,212,395...58,241,686
Ensembl chr11:61,565,680...61,594,579 		JBrowse link
G SLC7A1 solute carrier family 7 member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr13:10,791,600...10,877,082
Ensembl chr13:28,837,200...28,907,403 		JBrowse link
G SMPD1 sphingomyelin phosphodiesterase 1 involved_in
acts_upstream_of_positive_effect		 ISO (PMID:22573858)
(PMID:33163980)		 UniProt PMID:22573858 PMID:33163980 NCBI chr11:6,521,812...6,526,349 JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr15:20,499,789...20,520,152
Ensembl chr15:38,739,509...38,760,288 		JBrowse link
G UVRAG UV radiation resistance associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24550300) Ensembl
MGI		 PMID:24550300 GO_REF:0000107 NCBI chr11:70,870,341...71,197,559
Ensembl chr11:74,172,919...74,496,046 		JBrowse link
G VAMP8 vesicle associated membrane protein 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24550300) MGI
Ensembl		 PMID:24550300 GO_REF:0000107 NCBI chr2A:85,627,678...85,632,205
Ensembl chr2A:87,180,681...87,185,195 		JBrowse link
G VPS16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (PMID:24550300) MGI PMID:24550300 NCBI chr20:2,931,553...2,956,604
Ensembl chr20:2,695,335...2,720,030 		JBrowse link
G VPS18 VPS18 core subunit of CORVET and HOPS complexes involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24550300) Ensembl
MGI		 PMID:24550300 GO_REF:0000107 NCBI chr15:19,836,707...19,846,231
Ensembl chr15:38,086,518...38,095,835 		JBrowse link
G XPR1 xenotropic and polytropic retrovirus receptor 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:156,121,029...156,367,565
Ensembl chr 1:159,790,170...160,029,208 		JBrowse link
G ZNF639 zinc finger protein 639 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:176,353,400...176,366,142
Ensembl chr 3:184,533,061...184,539,270 		JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:30,098,796...30,146,347
Ensembl chr20:31,236,778...31,285,264 		JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:33,043,148...33,059,564
Ensembl chr 9:33,851,377...33,867,942 		JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:98,571,796...98,623,581
Ensembl chr 9:127,245,508...127,297,645 		JBrowse link
G MVB12A multivesicular body subunit 12A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:16,906,449...16,911,717
Ensembl chr19:17,880,073...17,894,044 		JBrowse link
G MVB12B multivesicular body subunit 12B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:97,444,439...97,624,085
Ensembl chr 9:125,953,845...126,133,369 		JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:33,719,603...33,793,301
Ensembl chr 3:34,016,474...34,093,631 		JBrowse link
G TSG101 tumor susceptibility 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:18,518,110...18,564,814
Ensembl chr11:18,189,868...18,248,149 		JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP1A charged multivesicular body protein 1A involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr16:70,398,021...70,411,383
Ensembl chr16:90,003,892...90,017,653 		JBrowse link
G CHMP1B charged multivesicular body protein 1B involved_in ISO (PMID:24878737) ComplexPortal PMID:24878737 NCBI chr18:2,452,393...2,455,509 JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr19:55,564,622...55,568,214
Ensembl chr19:64,377,986...64,381,417 		JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:87,358,297...87,386,556
Ensembl chr 3:89,471,993...89,501,241 		JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chr2A:86,559,695...86,619,615
Ensembl chr2A:88,106,242...88,165,104 		JBrowse link
G CHMP4A charged multivesicular body protein 4A involved_in IEA UniProt GO_REF:0000117 NCBI chr14:4,985,642...4,989,985 JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr20:30,098,796...30,146,347
Ensembl chr20:31,236,778...31,285,264 		JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:78,259,783...78,286,807
Ensembl chr 8:79,879,716...79,906,852 		JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:33,043,148...33,059,564
Ensembl chr 9:33,851,377...33,867,942 		JBrowse link
G CHMP6 charged multivesicular body protein 6 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:75,415,055...75,423,279
Ensembl chr17:81,144,837...81,151,962 		JBrowse link
G CHMP7 charged multivesicular body protein 7 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:22,497,479...22,513,005
Ensembl chr 8:19,434,829...19,450,221 		JBrowse link
G TM9SF1 transmembrane 9 superfamily member 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr14:4,965,352...4,972,476 JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:49,685,827...49,699,542
Ensembl chr16:69,074,091...69,085,714 		JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:56,749,439...56,782,660
Ensembl chr18:60,060,285...60,095,109 		JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP1A charged multivesicular body protein 1A involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr16:70,398,021...70,411,383
Ensembl chr16:90,003,892...90,017,653 		JBrowse link
G CHMP1B charged multivesicular body protein 1B involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chr18:2,452,393...2,455,509 JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr19:55,564,622...55,568,214
Ensembl chr19:64,377,986...64,381,417 		JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:87,358,297...87,386,556
Ensembl chr 3:89,471,993...89,501,241 		JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IEA UniProt
Ensembl		 GO_REF:0000107 GO_REF:0000117 NCBI chr2A:86,559,695...86,619,615
Ensembl chr2A:88,106,242...88,165,104 		JBrowse link
G CHMP4A charged multivesicular body protein 4A involved_in IEA UniProt GO_REF:0000117 NCBI chr14:4,985,642...4,989,985 JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr20:30,098,796...30,146,347
Ensembl chr20:31,236,778...31,285,264 		JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:78,259,783...78,286,807
Ensembl chr 8:79,879,716...79,906,852 		JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:33,043,148...33,059,564
Ensembl chr 9:33,851,377...33,867,942 		JBrowse link
G CHMP6 charged multivesicular body protein 6 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:75,415,055...75,423,279
Ensembl chr17:81,144,837...81,151,962 		JBrowse link
G CHMP7 charged multivesicular body protein 7 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chr 8:22,497,479...22,513,005
Ensembl chr 8:19,434,829...19,450,221 		JBrowse link
G MITD1 microtubule interacting and trafficking domain containing 1 NOT|involved_in ISO (PMID:23045692) UniProt PMID:23045692 NCBI chr2A:100,116,263...100,130,580
Ensembl chr2A:100,097,758...100,111,589 		JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:33,719,603...33,793,301
Ensembl chr 3:34,016,474...34,093,631 		JBrowse link
G TM9SF1 transmembrane 9 superfamily member 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr14:4,965,352...4,972,476 JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:49,685,827...49,699,542
Ensembl chr16:69,074,091...69,085,714 		JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:56,749,439...56,782,660
Ensembl chr18:60,060,285...60,095,109 		JBrowse link
viral exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL8B ADP ribosylation factor like GTPase 8B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:5,069,592...5,127,301
Ensembl chr 3:5,169,950...5,225,543 		JBrowse link
viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAS6 growth arrest specific 6 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr13:113,968,843...114,009,562 JBrowse link
G GRK2 G protein-coupled receptor kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,624,647...62,644,846
Ensembl chr11:65,939,164...65,959,066 		JBrowse link
G KPNA6 karyopherin subunit alpha 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28189564) Ensembl
MGI		 PMID:28189564 GO_REF:0000107 NCBI chr 1:31,394,159...31,462,821
Ensembl chr 1:32,406,326...32,471,488 		JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588 		JBrowse link
viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV2 caveolin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:108,254,074...108,480,716
Ensembl chr 7:121,168,579...121,177,415 		JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:55,564,622...55,568,214
Ensembl chr19:64,377,986...64,381,417 		JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:87,358,297...87,386,556
Ensembl chr 3:89,471,993...89,501,241 		JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:86,559,695...86,619,615
Ensembl chr2A:88,106,242...88,165,104 		JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:56,599,422...56,633,140
Ensembl chr11:59,964,235...59,997,805 		JBrowse link
G IST1 IST1 factor associated with ESCRT-III involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:53,082,530...53,115,965
Ensembl chr16:71,733,302...71,765,969 		JBrowse link
G PC pyruvate carboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396 		JBrowse link
G RAB7A RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) CACAO PMID:22072966 NCBI chr 3:125,784,604...125,873,051 JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:50,965,592...50,991,630
Ensembl chr17:55,826,458...55,852,422 		JBrowse link
G TRIM31 tripartite motif containing 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:29,880,668...29,890,905
Ensembl chr 6:30,550,802...30,560,977 		JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:32,429,824...32,467,185
Ensembl chr 1:33,614,555...33,650,859 		JBrowse link
G TSG101 tumor susceptibility 101 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:18,518,110...18,564,814
Ensembl chr11:18,189,868...18,248,149 		JBrowse link
G VAPA VAMP associated protein A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:4,329,479...4,373,047
Ensembl chr18:6,612,105...6,637,829 		JBrowse link
G VAPB VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chr20:54,736,035...54,798,155
Ensembl chr20:56,010,782...56,064,363 		JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:120,469,840...120,500,394
Ensembl chr12:124,703,077...124,733,889 		JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:49,685,827...49,699,542
Ensembl chr16:69,074,091...69,085,714 		JBrowse link
G ZNF502 zinc finger protein 502 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:44,607,484...44,618,977
Ensembl chr 3:45,665,147...45,676,361 		JBrowse link
viral RNA genome packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX6 DEAD-box helicase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:113,587,220...113,630,995
Ensembl chr11:117,515,778...117,559,364 		JBrowse link
G PC pyruvate carboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396 		JBrowse link
viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCBP1 poly(rC) binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:70,144,217...70,145,938
Ensembl chr2A:71,258,331...71,261,658 		JBrowse link
G PCBP2 poly(rC) binding protein 2 involved_in ISO (PMID:12414943) UniProt PMID:12414943 NCBI chr12:35,273,540...35,301,292
Ensembl chr12:36,058,463...36,082,672 		JBrowse link
virion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490 		JBrowse link
G RAB1A RAB1A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr2A:65,149,922...65,193,305
Ensembl chr2A:66,274,809...66,318,290 		JBrowse link
G RAB1B RAB1B, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:61,634,017...61,642,945
Ensembl chr11:64,959,957...64,968,843 		JBrowse link
G RAB43 RAB43, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:126,145,723...126,179,989
Ensembl chr 3:133,504,093...133,538,331 		JBrowse link
G SPCS1 signal peptidase complex subunit 1 involved_in ISO (PMID:24009510), (PMID:29593046) UniProt PMID:24009510 PMID:29593046 NCBI chr 3:52,646,427...52,648,786
Ensembl chr 3:53,873,921...53,876,229 		JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:644,646...670,860
Ensembl chr20:414,066...431,032 		JBrowse link
G USP6NL USP6 N-terminal like involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:11,470,413...11,542,608
Ensembl chr10:11,453,137...11,590,863 		JBrowse link
virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSP90AB1 heat shock protein 90 alpha family class B member 1 involved_in ISO (PMID:24098578) CACAO PMID:24098578 NCBI chr 6:43,842,796...43,849,637
Ensembl chr 6:45,125,773...45,133,872 		JBrowse link
virus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MVB12A multivesicular body subunit 12A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr19:16,906,449...16,911,717
Ensembl chr19:17,880,073...17,894,044 		JBrowse link
G MVB12B multivesicular body subunit 12B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:97,444,439...97,624,085
Ensembl chr 9:125,953,845...126,133,369 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16313
    viral process 329
      viral life cycle 253
        intracellular transport of virus + 7
        negative regulation of viral life cycle + 36
        positive regulation of viral life cycle + 25
        regulation of viral life cycle + 142
        symbiont entry into host cell + 98
        viral genome integration into host DNA 0
        viral genome replication + 119
        viral release from host cell + 28
        virion assembly + 30
        virion attachment to host cell + 9
        virus maturation + 2
paths to the root