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ONTOLOGY REPORT - ANNOTATIONS

Term:GDP binding
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Accession:GO:0019003 term browser browse the term
Definition:Binding to GDP, guanosine 5'-diphosphate.

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GDP binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ADP ribosylation factor 1 ISO RGD PMID:7552752 RGD:9684957 NCBI chrNW_004936864:117,510...119,612 JBrowse link
G Arf6 ADP ribosylation factor 6 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936583:181,490...185,466
Ensembl chrNW_004936583:181,490...185,471 		JBrowse link
G Arl2 ADP ribosylation factor like GTPase 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,336,190...4,343,007
Ensembl chrNW_004936599:4,336,079...4,343,061 		JBrowse link
G Arl3 ADP ribosylation factor like GTPase 3 enables ISO
IEA		 RGD
Ensembl		 PMID:8034651 GO_REF:0000107 RGD:68742 NCBI chrNW_004936600:3,190,212...3,229,831
Ensembl chrNW_004936600:3,190,208...3,232,755 		JBrowse link
G Arl8b ADP ribosylation factor like GTPase 8B enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,430,939...4,475,186
Ensembl chrNW_004936577:4,430,898...4,475,212 		JBrowse link
G Diras1 DIRAS family GTPase 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:1,572,975...1,575,971
Ensembl chrNW_004936588:1,572,400...1,590,779 		JBrowse link
G Diras2 DIRAS family GTPase 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936780:1,377,569...1,408,889
Ensembl chrNW_004936780:1,380,876...1,381,475 		JBrowse link
G Dnm1 dynamin 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,767,897...15,797,722
Ensembl chrNW_004936487:15,767,897...15,801,211 		JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:23,011,888...23,042,497
Ensembl chrNW_004936473:23,009,351...23,042,439 		JBrowse link
G Eif2b1 eukaryotic translation initiation factor 2B subunit alpha ISO RGD PMID:3818593 RGD:1581069 NCBI chrNW_004936558:1,196,111...1,205,321
Ensembl chrNW_004936558:1,196,068...1,205,867 		JBrowse link
G Eras ES cell expressed Ras enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936721:782,343...783,591
Ensembl chrNW_004936721:782,525...783,208 		JBrowse link
G Gem GTP binding protein overexpressed in skeletal muscle enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:7,262,629...7,275,860
Ensembl chrNW_004936544:7,262,629...7,275,910 		JBrowse link
G Gnai1 G protein subunit alpha i1 enables ISO PMID:19703466
PMID:8073283
PMID:8939752		 RGD
UniProt
CAFA		 PMID:8073283 PMID:8939752 PMID:9108480 PMID:19703466 RGD:10449520 RGD:12792992 RGD:12792995 RGD:7207370 NCBI chrNW_004936810:353,405...435,087
Ensembl chrNW_004936810:353,067...438,337 		JBrowse link
G Gnai3 G protein subunit alpha i3 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:1,031,476...1,075,662
Ensembl chrNW_004936704:1,032,708...1,074,384 		JBrowse link
G Hras HRas proto-oncogene, GTPase enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936888:375,372...378,125
Ensembl chrNW_004936888:375,377...377,958 		JBrowse link
G Kras KRAS proto-oncogene, GTPase enables ISO
IEA		 RGD
TreeGrafter		 PMID:12594205 GO_REF:0000118 RGD:1581766 NCBI chrNW_004936548:2,078,568...2,113,877
Ensembl chrNW_004936548:2,079,036...2,110,523 		JBrowse link
G LOC101957863 guanylate-binding protein 1-like enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936732:52,642...67,706
Ensembl chrNW_004936732:52,598...69,691 		JBrowse link
G LOC101962074 ras-related protein Rap-1b enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936864:771,432...773,383 JBrowse link
G LOC101962702 ras-related protein Rap-2c-like enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936621:1,850,425...1,851,984 JBrowse link
G LOC101965130 signal recognition particle 54 kDa protein enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936494:9,183,620...9,220,510
Ensembl chrNW_004936494:9,227,321...9,246,955
Ensembl chrNW_004936494:9,227,321...9,246,955 		JBrowse link
G Mief1 mitochondrial elongation factor 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:2,118,565...2,132,181
Ensembl chrNW_004936492:2,117,790...2,131,220 		JBrowse link
G Mras muscle RAS oncogene homolog enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936540:672,783...725,129
Ensembl chrNW_004936540:672,544...725,143 		JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:10,634,788...10,640,182
Ensembl chrNW_004936490:10,633,454...10,649,914 		JBrowse link
G Nras NRAS proto-oncogene, GTPase enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936627:73,413...82,590
Ensembl chrNW_004936627:73,413...82,590 		JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 ISO RGD PMID:16125296 RGD:1601233 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005 		JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:1651917 PMID:9348095 PMID:9748490 RGD:1599724 RGD:2291920 RGD:2291928 NCBI chrNW_004936499:7,114,838...7,136,468
Ensembl chrNW_004936499:7,115,780...7,136,449 		JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:1651917 PMID:9348095 PMID:9748490 RGD:1599724 RGD:2291920 RGD:2291928 NCBI chrNW_004936470:2,547,038...2,576,951
Ensembl chrNW_004936470:2,546,985...2,576,953 		JBrowse link
G Rab10 RAB10, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:6,263,870...6,351,327
Ensembl chrNW_004936493:6,263,863...6,351,327 		JBrowse link
G Rab11b RAB11B, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:5,198,659...5,210,430
Ensembl chrNW_004936588:5,198,394...5,214,603 		JBrowse link
G Rab12 RAB12, member RAS oncogene family enables ISO (PMID:20937701) UniProt PMID:20937701 NCBI chrNW_004936670:2,315,930...2,338,489
Ensembl chrNW_004936670:2,315,442...2,338,509 		JBrowse link
G Rab14 RAB14, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:9,675,517...9,699,469
Ensembl chrNW_004936487:9,673,487...9,690,654 		JBrowse link
G Rab17 RAB17, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:748,851...765,636
Ensembl chrNW_004936525:748,600...765,642 		JBrowse link
G Rab18 RAB18, member RAS oncogene family enables ISO (PMID:20937701) UniProt PMID:20937701 NCBI chrNW_004936613:1,875,366...1,909,080 JBrowse link
G Rab21 RAB21, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936568:814,647...846,426
Ensembl chrNW_004936568:814,656...846,206 		JBrowse link
G Rab22a RAB22A, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:907,359...963,490
Ensembl chrNW_004936530:907,400...963,488 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:16,738,204...16,815,561
Ensembl chrNW_004936471:16,738,230...16,815,943 		JBrowse link
G Rab27b RAB27B, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:9,039,552...9,176,182
Ensembl chrNW_004936497:9,039,546...9,098,039 		JBrowse link
G Rab28 RAB28, member RAS oncogene family enables ISO (PMID:19026641), (PMID:20937701) UniProt PMID:19026641 PMID:20937701 NCBI chrNW_004936477:14,066,063...14,140,310 JBrowse link
G Rab29 RAB29, member RAS oncogene family enables ISO
IEA		 RGD
Ensembl		 PMID:9177482 GO_REF:0000107 RGD:633763 NCBI chrNW_004936557:6,673,092...6,679,715
Ensembl chrNW_004936557:6,673,065...6,683,468 		JBrowse link
G Rab2a RAB2A, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:12,626,242...12,680,334
Ensembl chrNW_004936496:12,626,250...12,680,365 		JBrowse link
G Rab31 RAB31, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:1,628,379...1,673,150
Ensembl chrNW_004936626:1,628,451...1,660,510 		JBrowse link
G Rab35 RAB35, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:795,477...812,187
Ensembl chrNW_004936668:800,854...810,128 		JBrowse link
G Rab3b RAB3B, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:8,924,724...8,985,309
Ensembl chrNW_004936522:8,924,617...8,989,734 		JBrowse link
G Rab40c RAB40C, member RAS oncogene family ISO RGD PMID:15160388 RGD:1302495 NCBI chrNW_004936501:375,663...409,243
Ensembl chrNW_004936501:373,859...409,267 		JBrowse link
G Rab4a RAB4A, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:20,281,495...20,301,906
Ensembl chrNW_004936484:20,281,435...20,301,391 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:12,238,226...12,267,339
Ensembl chrNW_004936473:12,238,156...12,269,089 		JBrowse link
G Rab5b RAB5B, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:386,958...408,265
Ensembl chrNW_004936646:386,833...410,192 		JBrowse link
G Rab5c RAB5C, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:16,962,793...16,985,006
Ensembl chrNW_004936490:16,960,917...16,985,022 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family enables ISO
IEA		 RGD
Ensembl		 PMID:16040606 GO_REF:0000107 RGD:4892340 NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176 		JBrowse link
G Rab8a RAB8A, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:4,385,788...4,403,393
Ensembl chrNW_004936596:4,385,772...4,403,441 		JBrowse link
G Rab8b RAB8B, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:23,768,460...23,832,072
Ensembl chrNW_004936471:23,768,415...23,834,129 		JBrowse link
G Rab9a RAB9A, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:3,253,631...3,275,078
Ensembl chrNW_004936470:3,253,652...3,275,075 		JBrowse link
G Rab9b RAB9B, member RAS oncogene family enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936499:10,501,837...10,506,793
Ensembl chrNW_004936499:10,437,611...10,504,320 		JBrowse link
G Rala RAS like proto-oncogene A enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936478:15,167,651...15,186,594
Ensembl chrNW_004936478:15,167,751...15,186,633 		JBrowse link
G Ralb RAS like proto-oncogene B enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936469:50,237,804...50,279,483
Ensembl chrNW_004936469:50,236,409...50,279,583 		JBrowse link
G Ran RAN, member RAS oncogene family enables ISO
IEA		 RGD
Ensembl		 PMID:19505478 GO_REF:0000107 RGD:4145659 NCBI chrNW_004936660:1,669,352...1,673,972
Ensembl chrNW_004936660:1,668,956...1,672,067 		JBrowse link
G Rap1a RAP1A, member of RAS oncogene family enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936690:275,840...363,752
Ensembl chrNW_004936690:315,752...366,413 		JBrowse link
G Rap1b RAP1B, member of RAS oncogene family enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936545:6,567,873...6,578,404
Ensembl chrNW_004936545:6,568,577...6,574,595 		JBrowse link
G Rap2a RAP2A, member of RAS oncogene family enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936472:12,634,563...12,671,656
Ensembl chrNW_004936472:12,634,445...12,671,662 		JBrowse link
G Rap2b RAP2B, member of RAS oncogene family enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936519:1,115,865...1,121,196
Ensembl chrNW_004936519:1,116,009...1,116,560 		JBrowse link
G Rap2c RAP2C, member of RAS oncogene family enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936691:2,628,563...2,645,133
Ensembl chrNW_004936691:2,628,579...2,645,268 		JBrowse link
G Rasef RAS and EF-hand domain containing enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936632:114,969...179,642
Ensembl chrNW_004936632:115,008...181,990 		JBrowse link
G Rheb Ras homolog, mTORC1 binding enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:16354680 GO_REF:0000107 GO_REF:0000118 RGD:1625606 NCBI chrNW_004936527:6,832,286...6,877,938
Ensembl chrNW_004936527:6,832,169...6,878,164 		JBrowse link
G Rhebl1 RHEB like 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936512:6,864,843...6,868,045
Ensembl chrNW_004936512:6,864,843...6,868,069 		JBrowse link
G Rhoa ras homolog family member A ISO RGD PMID:20472934 RGD:7242691 NCBI chrNW_004936529:1,000,050...1,045,655
Ensembl chrNW_004936529:999,935...1,045,681 		JBrowse link
G Rhob ras homolog family member B enables ISO (PMID:8939998) MGI PMID:8939998 NCBI chrNW_004936493:10,987,801...10,990,207 JBrowse link
G Rit1 Ras like without CAAX 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936580:5,157,351...5,166,790
Ensembl chrNW_004936580:5,156,565...5,167,040 		JBrowse link
G Rit2 Ras like without CAAX 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936517:3,145,761...3,535,014
Ensembl chrNW_004936517:3,145,598...3,480,781 		JBrowse link
G Rragc Ras related GTP binding C enables IEA Ensembl GO_REF:0000107
G Rragd Ras related GTP binding D enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:2,810,028...2,849,792
Ensembl chrNW_004936510:2,810,022...2,853,306 		JBrowse link
G Rras RAS related enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936664:3,456,681...3,460,537
Ensembl chrNW_004936664:3,456,290...3,460,788 		JBrowse link
G Rras2 RAS related 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936528:4,413,436...4,429,166
Ensembl chrNW_004936528:4,413,436...4,427,741 		JBrowse link
G Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha ISO RGD PMID:7430155 RGD:2306879 NCBI chrNW_004936650:3,278,769...3,313,537
Ensembl chrNW_004936650:3,275,019...3,313,599 		JBrowse link
G Suclg2 succinate-CoA ligase GDP-forming subunit beta ISO RGD PMID:7430155 RGD:2306879 NCBI chrNW_004936603:243,113...378,526
Ensembl chrNW_004936603:243,113...378,528 		JBrowse link
G Trim23 tripartite motif containing 23 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:3,557,699...3,593,514
Ensembl chrNW_004936480:3,556,592...3,592,984 		JBrowse link
G Ucp1 uncoupling protein 1 enables ISO PMID:22952235 UniProt PMID:22952235 RGD:11541104 NCBI chrNW_004936535:7,258,146...7,265,475
Ensembl chrNW_004936535:7,258,343...7,265,398 		JBrowse link
G Ucp2 uncoupling protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:3,059,700...3,066,112
Ensembl chrNW_004936498:3,059,297...3,066,197 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17092
    binding 15355
      small molecule binding 4970
        ion binding 4762
          anion binding 2196
            GDP binding 77
Path 2
Term Annotations click to browse term
  molecular_function 17092
    binding 15355
      organic cyclic compound binding 4944
        nucleoside phosphate binding 1938
          nucleotide binding 1938
            purine nucleotide binding 1793
              guanyl nucleotide binding 364
                guanyl ribonucleotide binding 364
                  GDP binding 77
paths to the root