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ONTOLOGY REPORT - ANNOTATIONS


Term:protein prenylation
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Accession:GO:0018342 term browser browse the term
Definition:The covalent attachment of a prenyl group to a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.
Synonyms:exact_synonym: protein amino acid prenylation
 narrow_synonym: C-terminal protein prenylation
 alt_id: GO:0018346


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protein prenylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fntb farnesyltransferase, CAAX box, beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:95,536,540...95,619,587
Ensembl chr 6:95,470,683...95,619,586
JBrowse link
G Pggt1b protein geranylgeranyltransferase type I subunit beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:38,952,147...38,995,656
Ensembl chr18:38,952,914...38,995,503
JBrowse link
G Ptar1 protein prenyltransferase alpha subunit repeat containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:221,283,306...221,326,861
Ensembl chr 1:221,283,415...221,327,073
JBrowse link
G Rabggtb Rab geranylgeranyltransferase subunit beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:242,844,758...242,850,022
Ensembl chr 2:242,844,762...242,851,050
JBrowse link
G Rce1 Ras converting CAAX endopeptidase 1 involved_in ISO
IEA
(PMID:10085068)
GO_REF:0000107
RGD
Ensembl
PMID:10085068 GO_REF:0000107 NCBI chr 1:201,899,358...201,902,593
Ensembl chr 1:201,899,358...201,902,484
JBrowse link
positive regulation of protein geranylgeranylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISO (MGI:2680892|PMID:14622576) RGD PMID:14622576 MGI:2680892 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in ISO (MGI:2680892|PMID:14622576) RGD PMID:14622576 MGI:2680892 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
JBrowse link
protein farnesylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 acts_upstream_of_or_within ISO (PMID:14555765) RGD PMID:14555765 NCBI chr10:56,655,693...56,664,922
Ensembl chr10:56,655,693...56,664,922
JBrowse link
G Fnta farnesyltransferase, CAAX box, alpha involved_in IBA
ISS
ISO
IEA
PMID:21873635
GO_REF:0000024
(PMID:16893176), (PMID:19228685)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16893176 PMID:19228685 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr16:66,065,131...66,083,460
Ensembl chr16:66,065,132...66,083,460
JBrowse link
G Fntb farnesyltransferase, CAAX box, beta involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:16893176), (PMID:19228685)
UniProt
RGD
PMID:16893176 PMID:19228685 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:95,536,540...95,619,587
Ensembl chr 6:95,470,683...95,619,586
JBrowse link
protein geranylgeranylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chm CHM Rab escort protein involved_in IEA
IDA
ISO
IBA
ISS
GO_REF:0000104
PMID:15186776
(PMID:7957092)
PMID:21873635
GO_REF:0000024
UniProt
RGD
PMID:7957092 PMID:15186776 PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:8553294, RGD:13792537 NCBI chr  X:78,203,200...78,361,996
Ensembl chr  X:78,203,204...78,361,943
JBrowse link
G Chml CHM like Rab escort protein involved_in ISO (PMID:12356470), (PMID:15186776) RGD PMID:12356470 PMID:15186776 NCBI chr13:87,613,610...87,615,475
Ensembl chr13:87,589,298...87,619,862
JBrowse link
G Fnta farnesyltransferase, CAAX box, alpha involved_in IEA
ISO
ISS
IBA
GO_REF:0000107
(PMID:16893176)
GO_REF:0000024
PMID:21873635
Ensembl
RGD
UniProt
PMID:16893176 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr16:66,065,131...66,083,460
Ensembl chr16:66,065,132...66,083,460
JBrowse link
G Pggt1b protein geranylgeranyltransferase type I subunit beta involved_in TAS
ISS
IBA
ISO
IDA
GO_REF:0000024
PMID:21873635
(PMID:16893176)
PMID:14609943
UniProt
RGD
PMID:16893176 PMID:8106351 PMID:21873635 PMID:14609943 GO_REF:0000024, RGD:729477, RGD:13792537, RGD:8554040 NCBI chr18:38,952,147...38,995,656
Ensembl chr18:38,952,914...38,995,503
JBrowse link
G Rabggta Rab geranylgeranyltransferase subunit alpha acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
MGI:1856886 (MGI:1334476|PMID:10737774)
PMID:21873635
PMID:18756270
RGD PMID:10737774 PMID:8505342 PMID:21873635 PMID:18756270 MGI:1334476, RGD:69952, RGD:13792537, RGD:8554706 NCBI chr15:29,206,328...29,213,398
Ensembl chr15:29,206,157...29,213,348
JBrowse link
G Rabggtb Rab geranylgeranyltransferase subunit beta involved_in IDA
IBA
IEA
PMID:18756270
PMID:21873635
GO_REF:0000104
UniProt PMID:8505342 PMID:18756270 PMID:21873635 GO_REF:0000104, RGD:69952, RGD:8554706, RGD:13792537 NCBI chr 2:242,844,758...242,850,022
Ensembl chr 2:242,844,762...242,851,050
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      cellular metabolic process 10721
        prenylation 12
          protein prenylation 12
            protein farnesylation + 3
            protein geranylgeranylation + 8
Path 2
Term Annotations click to browse term
  biological_process 19492
    metabolic process 11795
      organic substance metabolic process 11335
        organonitrogen compound metabolic process 6802
          protein metabolic process 5891
            cellular protein metabolic process 5229
              cellular protein modification process 3614
                protein prenylation 12
                  protein farnesylation + 3
                  protein geranylgeranylation + 8
paths to the root