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ONTOLOGY REPORT - ANNOTATIONS


Term:protein prenylation
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Accession:GO:0018342 term browser browse the term
Definition:The covalent attachment of a prenyl group to a protein; geranyl, farnesyl, or geranylgeranyl groups may be added.
Synonyms:exact_synonym: protein amino acid prenylation
 narrow_synonym: C-terminal protein prenylation
 alt_id: GO:0018346


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protein prenylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fntb farnesyltransferase, CAAX box, beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:99,883,959...99,966,988
Ensembl chr 6:99,883,959...99,966,988
JBrowse link
G Pggt1b protein geranylgeranyltransferase type I subunit beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:40,173,236...40,218,225
Ensembl chr18:40,175,951...40,218,225
JBrowse link
G Ptar1 protein prenyltransferase alpha subunit repeat containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:241,501,679...241,557,651
Ensembl chr 1:241,501,679...241,557,651
JBrowse link
G Rabggtb Rab geranylgeranyltransferase subunit beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:260,110,309...260,115,574
Ensembl chr 2:260,110,309...260,115,577
JBrowse link
G Rce1 Ras converting CAAX endopeptidase 1 involved_in ISO
IEA
(PMID:10085068)
GO_REF:0000107
RGD
Ensembl
PMID:10085068 GO_REF:0000107 NCBI chr 1:219,860,826...219,863,933
Ensembl chr 1:219,860,827...219,863,926
JBrowse link
positive regulation of protein geranylgeranylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin involved_in ISO (MGI:2680892|PMID:14622576) RGD PMID:14622576 MGI:2680892 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Musk muscle associated receptor tyrosine kinase involved_in ISO (MGI:2680892|PMID:14622576) RGD PMID:14622576 MGI:2680892 NCBI chr 5:75,392,790...75,498,694
Ensembl chr 5:75,392,790...75,498,694
JBrowse link
protein farnesylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 acts_upstream_of_or_within ISO (PMID:14555765) RGD PMID:14555765 NCBI chr10:58,599,690...58,631,194
Ensembl chr10:58,599,856...58,608,907
JBrowse link
G Fnta farnesyltransferase, CAAX box, alpha involved_in IBA
ISS
ISO
IEA
PMID:21873635
GO_REF:0000024
(PMID:16893176), (PMID:19228685)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16893176 PMID:19228685, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr16:70,834,957...70,854,724
Ensembl chr16:70,834,957...70,854,724
JBrowse link
G Fntb farnesyltransferase, CAAX box, beta involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:16893176), (PMID:19228685)
UniProt
RGD
PMID:16893176 PMID:19228685, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:99,883,959...99,966,988
Ensembl chr 6:99,883,959...99,966,988
JBrowse link
protein geranylgeranylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chm CHM Rab escort protein involved_in IEA
IDA
ISO
IBA
ISS
GO_REF:0000104
PMID:15186776
(PMID:7957092)
PMID:21873635
GO_REF:0000024
UniProt
RGD
PMID:7957092, PMID:15186776, PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:8553294, RGD:13792537 NCBI chr  X:84,666,900...84,821,775
Ensembl chr  X:84,666,900...84,821,775
JBrowse link
G Chml CHM like Rab escort protein involved_in ISO (PMID:12356470), (PMID:15186776) RGD PMID:12356470 PMID:15186776 NCBI chr13:93,740,759...93,742,624 JBrowse link
G Fnta farnesyltransferase, CAAX box, alpha involved_in IEA
ISO
ISS
IBA
GO_REF:0000107
(PMID:16893176)
GO_REF:0000024
PMID:21873635
Ensembl
RGD
UniProt
PMID:16893176, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr16:70,834,957...70,854,724
Ensembl chr16:70,834,957...70,854,724
JBrowse link
G Pggt1b protein geranylgeranyltransferase type I subunit beta involved_in TAS
ISS
IBA
ISO
IDA
GO_REF:0000024
PMID:21873635
(PMID:16893176)
PMID:14609943
UniProt
RGD
PMID:16893176, PMID:8106351, PMID:21873635, PMID:14609943 GO_REF:0000024, RGD:729477, RGD:13792537, RGD:8554040 NCBI chr18:40,173,236...40,218,225
Ensembl chr18:40,175,951...40,218,225
JBrowse link
G Rabggta Rab geranylgeranyltransferase subunit alpha acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
MGI:1856886 (MGI:1334476|PMID:10737774)
PMID:21873635
PMID:18756270
RGD PMID:10737774, PMID:8505342, PMID:21873635, PMID:18756270 MGI:1334476, RGD:69952, RGD:13792537, RGD:8554706 NCBI chr15:34,393,419...34,400,466
Ensembl chr15:34,393,233...34,400,449
JBrowse link
G Rabggtb Rab geranylgeranyltransferase subunit beta involved_in IDA
IBA
IEA
PMID:18756270
PMID:21873635
GO_REF:0000104
UniProt PMID:8505342, PMID:18756270, PMID:21873635 GO_REF:0000104, RGD:69952, RGD:8554706, RGD:13792537 NCBI chr 2:260,110,309...260,115,574
Ensembl chr 2:260,110,309...260,115,577
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    cellular process 18343
      cellular metabolic process 10755
        prenylation 12
          protein prenylation 12
            protein farnesylation + 3
            protein geranylgeranylation + 8
Path 2
Term Annotations click to browse term
  biological_process 19491
    metabolic process 11797
      organic substance metabolic process 11337
        organonitrogen compound metabolic process 6803
          protein metabolic process 5893
            cellular protein metabolic process 5230
              cellular protein modification process 3614
                protein prenylation 12
                  protein farnesylation + 3
                  protein geranylgeranylation + 8
paths to the root