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ONTOLOGY REPORT - ANNOTATIONS


Term:peptidyl-proline modification
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Accession:GO:0018208 term browser browse the term
Definition:The modification of peptidyl-proline.



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peptidyl-proline modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkbp10 FKBP prolyl isomerase 10 acts_upstream_of_or_within ISO (MGI:77542|PMID:7493967) RGD PMID:7493967 MGI:77542 NCBI chr10:85,345,434...85,357,998
Ensembl chr10:85,346,126...85,427,330
JBrowse link
N-terminal peptidyl-proline dimethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntmt1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 involved_in ISO
ISS
(PMID:20481588), (PMID:20668449)
(MGI:4821676|PMID:20668449)
GO_REF:0000024
RGD
UniProt
PMID:20481588 PMID:20668449 GO_REF:0000024 MGI:4821676 NCBI chr 3:14,093,374...14,110,565
Ensembl chr 3:14,093,977...14,110,663
JBrowse link
N-terminal peptidyl-proline methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntmt1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:14,093,374...14,110,565
Ensembl chr 3:14,093,977...14,110,663
JBrowse link
peptidyl-proline hydroxylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egln3 egl-9 family hypoxia-inducible factor 3 acts_upstream_of_or_within ISO (MGI:5574277|PMID:24030251) RGD PMID:24030251 MGI:5574277 NCBI chr 6:71,650,297...71,675,766
Ensembl chr 6:71,650,297...71,675,766
JBrowse link
G Gpr162 G protein-coupled receptor 162 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:157,662,200...157,668,341 JBrowse link
G Ogfod1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 involved_in IBA
ISO
PMID:21873635
(PMID:24550447)
RGD PMID:24550447 PMID:21873635 RGD:13792537 NCBI chr19:10,948,778...10,974,566
Ensembl chr19:10,946,018...10,975,119
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:132,841,868...132,856,664
Ensembl chr 5:132,841,928...132,856,659
JBrowse link
G P3h2 prolyl 3-hydroxylase 2 involved_in ISO
IDA
ISS
IEA
(PMID:18487197)
PMID:21757687
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:18487197 PMID:21757687 GO_REF:0000024 GO_REF:0000107, RGD:8553392 NCBI chr11:74,634,267...74,775,422
Ensembl chr11:74,634,267...74,775,421
JBrowse link
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 acts_upstream_of_or_within ISO MGI:3706369 (MGI:3706231|PMID:17135260) RGD PMID:17135260 MGI:3706231 NCBI chr20:27,302,046...27,352,098
Ensembl chr20:27,302,141...27,352,786
JBrowse link
G P4ha2 prolyl 4-hydroxylase subunit alpha 2 acts_upstream_of_or_within ISO (MGI:72931|PMID:7753822) RGD PMID:7753822 MGI:72931 NCBI chr10:38,243,047...38,271,989
Ensembl chr10:38,243,139...38,287,314
JBrowse link
G P4ha3 prolyl 4-hydroxylase subunit alpha 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:154,628,723...154,663,779
Ensembl chr 1:154,628,736...154,663,775
JBrowse link
peptidyl-proline hydroxylation to 3-hydroxy-L-proline term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crtap cartilage associated protein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3693334 (MGI:3692844|PMID:17055431)
RGD PMID:17055431 PMID:21873635 MGI:3692844, RGD:13792537 NCBI chr 8:114,047,929...114,067,648
Ensembl chr 8:114,047,933...114,067,631
JBrowse link
peptidyl-proline hydroxylation to 4-hydroxy-L-proline term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egln1 egl-9 family hypoxia-inducible factor 1 involved_in IBA
ISO
PMID:21873635
(PMID:11598268)
RGD PMID:11598268 PMID:21873635 RGD:13792537 NCBI chr19:52,867,914...52,907,169
Ensembl chr19:52,869,486...52,907,777
JBrowse link
G Egln2 egl-9 family hypoxia-inducible factor 2 involved_in ISO
IDA
IBA
(PMID:11598268), (PMID:12039559)
PMID:15925519
PMID:21873635
RGD PMID:11598268 PMID:12039559 PMID:15925519 PMID:21873635 RGD:13602003, RGD:13792537 NCBI chr 1:82,451,554...82,459,809
Ensembl chr 1:82,451,555...82,459,751
JBrowse link
G Egln3 egl-9 family hypoxia-inducible factor 3 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:11598268)
Ensembl
RGD
PMID:11598268 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 6:71,650,297...71,675,766
Ensembl chr 6:71,650,297...71,675,766
JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within ISO MGI:1859815|MGI:1914725 (MGI:5461404|PMID:22981861) RGD PMID:22981861 MGI:5461404 NCBI chr15:18,495,037...18,530,440
Ensembl chr15:18,492,945...18,530,478
JBrowse link
G Ero1b endoplasmic reticulum oxidoreductase 1 beta acts_upstream_of_or_within ISO MGI:1354385|MGI:1859815 (MGI:5461404|PMID:22981861) RGD PMID:22981861 MGI:5461404 NCBI chr17:85,861,086...86,003,244
Ensembl chr17:85,929,618...86,003,398
JBrowse link
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 acts_upstream_of_or_within
involved_in
TAS
ISO
IBA
(MGI:72931|PMID:7753822)
PMID:21873635
RGD PMID:7753822 PMID:11997102 PMID:21873635 MGI:72931, RGD:625562, RGD:13792537 NCBI chr20:27,302,046...27,352,098
Ensembl chr20:27,302,141...27,352,786
JBrowse link
G P4ha2 prolyl 4-hydroxylase subunit alpha 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:72931|PMID:7753822)
RGD PMID:7753822 PMID:21873635 MGI:72931, RGD:13792537 NCBI chr10:38,243,047...38,271,989
Ensembl chr10:38,243,139...38,287,314
JBrowse link
G P4ha3 prolyl 4-hydroxylase subunit alpha 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:154,628,723...154,663,779
Ensembl chr 1:154,628,736...154,663,775
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta acts_upstream_of_or_within ISO (PMID:7753822) RGD PMID:7753822 NCBI chr10:105,836,972...105,848,583
Ensembl chr10:105,836,982...105,848,500
JBrowse link
G P4htm prolyl 4-hydroxylase, transmembrane involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:109,274,629...109,292,802
Ensembl chr 8:109,274,626...109,292,473
JBrowse link
G Prdx4 peroxiredoxin 4 acts_upstream_of_or_within ISO MGI:1354385|MGI:1914725 (MGI:5461404|PMID:22981861) RGD PMID:22981861 MGI:5461404 NCBI chr  X:40,026,762...40,044,066
Ensembl chr  X:40,026,651...40,044,066
JBrowse link
protein peptidyl-prolyl isomerization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07056556.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:23,753,065...23,753,559 JBrowse link
G Cwc27 CWC27 spliceosome associated cyclophilin involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:35,764,674...35,975,908
Ensembl chr 2:35,764,686...35,975,872
JBrowse link
G Fkbp11 FKBP prolyl isomerase 11 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:129,871,870...129,877,760
Ensembl chr 7:129,871,870...129,875,303
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A involved_in ISO
IBA
(PMID:1696686)
PMID:21873635
RGD PMID:1696686 PMID:21873635 RGD:13792537 NCBI chr 3:140,040,359...140,060,107
Ensembl chr 3:140,040,278...140,060,743
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B involved_in ISO
IBA
(PMID:7592869)
PMID:21873635
RGD PMID:7592869 PMID:21873635 RGD:13792537 NCBI chr 6:27,832,128...27,850,600
Ensembl chr 6:27,838,802...27,848,653
JBrowse link
G Fkbp2 FKBP prolyl isomerase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:204,167,724...204,170,399
Ensembl chr 1:204,167,726...204,170,420
JBrowse link
G Fkbp4 FKBP prolyl isomerase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:161,703,379...161,711,833
Ensembl chr 4:161,703,379...161,711,833
JBrowse link
G Fkbp5 FKBP prolyl isomerase 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:6,457,207...6,575,404
Ensembl chr20:6,457,216...6,541,674
JBrowse link
G Nktr natural killer cell triggering receptor involved_in IBA
ISO
PMID:21873635
(PMID:20676357)
RGD PMID:20676357 PMID:21873635 RGD:13792537 NCBI chr 8:121,380,010...121,420,495
Ensembl chr 8:121,382,436...121,418,314
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in ISO (PMID:29686383)
(MGI:3620333|PMID:16554819), (MGI:6158095|PMID:29686383)
RGD PMID:16554819 PMID:29686383 MGI:3620333 MGI:6158095 NCBI chr 8:19,189,408...19,200,785
Ensembl chr 8:19,189,373...19,200,785
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in IBA
ISS
IEA
ISO
PMID:21873635
GO_REF:0000024
GO_REF:0000002
(PMID:14993672), (PMID:20676357)
UniProt
InterPro
RGD
PMID:14993672 PMID:20676357 PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:13792537 NCBI chr14:81,279,292...81,282,960
Ensembl chr14:81,275,091...81,299,601
JBrowse link
G Ppial4d peptidylprolyl isomerase A (cyclophilin A)-like 4D involved_in IBA
ISS
PMID:21873635
GO_REF:0000024
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr14:21,006,522...21,007,284
Ensembl chr14:21,006,538...21,007,310
JBrowse link
G Ppial4g peptidylprolyl isomerase A like 4G involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:74,015,628...74,016,215
Ensembl chr15:74,015,628...74,016,215
JBrowse link
G Ppib peptidylprolyl isomerase B involved_in IBA
ISO
ISS
PMID:21873635
(PMID:20676357)
GO_REF:0000024
RGD
UniProt
CAFA
PMID:20676357 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:66,603,877...66,609,734
Ensembl chr 8:66,603,861...66,630,428
JBrowse link
G Ppic peptidylprolyl isomerase C involved_in IBA
ISO
PMID:21873635
(MGI:65336|PMID:1652374)
(PMID:20676357)
RGD PMID:1652374 PMID:20676357 PMID:21873635 MGI:65336, RGD:13792537 NCBI chr18:46,842,410...46,855,016
Ensembl chr18:46,842,409...46,855,017
JBrowse link
G Ppid peptidylprolyl isomerase D involved_in IDA
ISO
IBA
(PMID:20676357)
PMID:21873635
RGD PMID:20676357 PMID:12077116 PMID:21873635 RGD:625503, RGD:13792537 NCBI chr 2:164,727,803...164,740,168
Ensembl chr 2:164,727,779...164,740,221
JBrowse link
G Ppidl1 peptidylprolyl isomerase D-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:112,843,668...112,844,916
Ensembl chr 9:112,843,665...112,844,992
JBrowse link
G Ppie peptidylprolyl isomerase E involved_in ISO
IBA
(PMID:20676357)
PMID:21873635
RGD PMID:20676357 PMID:21873635 RGD:13792537 NCBI chr 5:135,406,177...135,419,511
Ensembl chr 5:135,406,176...135,419,235
JBrowse link
G Ppif peptidylprolyl isomerase F involved_in ISO
IBA
(PMID:20676357)
PMID:21873635
RGD PMID:20676357 PMID:21873635 RGD:13792537 NCBI chr16:1,257,197...1,263,919
Ensembl chr16:1,257,106...1,263,913
JBrowse link
G Ppig peptidylprolyl isomerase G involved_in ISO
IEA
IBA
(PMID:20676357)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:20676357 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:54,484,023...54,512,929
Ensembl chr 3:54,484,023...54,512,926
JBrowse link
G Ppih peptidylprolyl isomerase H involved_in IBA
ISO
PMID:21873635
(PMID:20676357)
RGD PMID:20676357 PMID:21873635 RGD:13792537 NCBI chr 5:132,906,324...132,924,341
Ensembl chr 5:132,906,328...132,924,267
JBrowse link
G Ppil1 peptidylprolyl isomerase like 1 involved_in ISO
IBA
(PMID:16595688), (PMID:20676357), (PMID:33220177)
PMID:21873635
RGD PMID:16595688 PMID:20676357 PMID:33220177 PMID:21873635 RGD:13792537 NCBI chr20:7,302,292...7,322,349
Ensembl chr20:7,302,621...7,322,354
JBrowse link
G Ppil3 peptidylprolyl isomerase like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:59,966,405...59,980,147
Ensembl chr 9:59,964,919...59,979,886
JBrowse link
G Ppil4 peptidylprolyl isomerase like 4 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:2,273,582...2,306,212
Ensembl chr 1:2,273,609...2,305,632
JBrowse link
G Ppil6 peptidylprolyl isomerase like 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:44,989,509...45,017,833
Ensembl chr20:44,988,943...45,018,340
JBrowse link
G Ppwd1 peptidylprolyl isomerase domain and WD repeat containing 1 involved_in ISO
IBA
(PMID:20676357)
PMID:21873635
RGD PMID:20676357 PMID:21873635 RGD:13792537 NCBI chr 2:35,337,301...35,360,661
Ensembl chr 2:35,335,962...35,360,460
JBrowse link
G Ranbp2 RAN binding protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:26,442,156...26,493,481
Ensembl chr20:26,442,217...26,493,481
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18877
    metabolic process 11591
      primary metabolic process 10402
        protein metabolic process 5863
          protein modification process 3659
            peptidyl-amino acid modification 1305
              peptidyl-proline modification 45
                N-terminal peptidyl-proline N-formylation 0
                N-terminal peptidyl-proline acetylation 0
                N-terminal peptidyl-proline methylation + 1
                peptidyl-proline hydroxylation + 16
                protein O-linked glycosylation via hydroxyproline 0
                protein peptidyl-prolyl isomerization + 27
Path 2
Term Annotations click to browse term
  biological_process 18877
    metabolic process 11591
      organic substance metabolic process 11152
        macromolecule metabolic process 9583
          protein metabolic process 5863
            protein modification process 3659
              peptidyl-amino acid modification 1305
                peptidyl-proline modification 45
                  N-terminal peptidyl-proline N-formylation 0
                  N-terminal peptidyl-proline acetylation 0
                  N-terminal peptidyl-proline methylation + 1
                  peptidyl-proline hydroxylation + 16
                  protein O-linked glycosylation via hydroxyproline 0
                  protein peptidyl-prolyl isomerization + 27
paths to the root