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ONTOLOGY REPORT - ANNOTATIONS


Term:serine C-palmitoyltransferase complex
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Accession:GO:0017059 term browser browse the term
Definition:An enzyme complex that catalyzes the transfer of a palmitoyl on to serine, forming 3-dehydro-D-sphinganine.



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serine C-palmitoyltransferase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 part_of ISO (PMID:19416851) RGD PMID:19416851 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 part_of ISO
IBA
(PMID:19416851)
PMID:21873635
RGD PMID:19416851 PMID:21873635 RGD:13792537 NCBI chr 6:106,948,681...107,031,584
Ensembl chr 6:106,950,949...107,031,542
JBrowse link
G Sptlc3 serine palmitoyltransferase, long chain base subunit 3 part_of IBA
ISO
PMID:21873635
(PMID:17331073), (PMID:19416851)
RGD PMID:17331073 PMID:19416851 PMID:21873635 RGD:13792537 NCBI chr 3:126,847,878...126,978,010
Ensembl chr 3:126,847,878...126,978,010
JBrowse link
G Sptssa serine palmitoyltransferase, small subunit A part_of ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:19416851)
UniProt
RGD
PMID:19416851 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:72,144,714...72,156,130
Ensembl chr 6:72,144,714...72,156,214
JBrowse link
G Sptssb serine palmitoyltransferase, small subunit B part_of IBA
ISO
PMID:21873635
(MGI:5689923|PMID:26438849)
(PMID:19416851)
RGD PMID:19416851 PMID:26438849 PMID:21873635 MGI:5689923, RGD:13792537 NCBI chr 2:154,133,728...154,162,127
Ensembl chr 2:154,133,733...154,163,120
JBrowse link
SPOTS complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:48,243,365...48,253,316
Ensembl chr 9:48,237,572...48,253,211
JBrowse link
G Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 part_of IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:1,247,869...1,250,999
Ensembl chr 7:1,246,479...1,250,907
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 part_of ISS
ISO
IEA
IBA
GO_REF:0000024
(PMID:20182505), (PMID:25691431)
GO_REF:0000107
PMID:21873635
UniProt
RGD
Ensembl
PMID:20182505 PMID:25691431 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr10:83,590,052...83,598,620
Ensembl chr10:83,590,071...83,598,620
JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 part_of ISO (PMID:20182505), (PMID:25691431) RGD PMID:20182505 PMID:25691431 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19895
    protein-containing complex 5947
      endoplasmic reticulum protein-containing complex 138
        endoplasmic reticulum palmitoyltransferase complex 8
          serine C-palmitoyltransferase complex 8
            SPOTS complex 4
            homodimeric serine palmitoyltransferase complex 0
Path 2
Term Annotations click to browse term
  cellular_component 19895
    cellular anatomical entity 19598
      intracellular anatomical structure 14286
        intracellular organelle 12665
          intracellular membrane-bounded organelle 11161
            endoplasmic reticulum 1756
              endoplasmic reticulum subcompartment 959
                endoplasmic reticulum membrane 949
                  endoplasmic reticulum palmitoyltransferase complex 8
                    serine C-palmitoyltransferase complex 8
                      SPOTS complex 4
                      homodimeric serine palmitoyltransferase complex 0
paths to the root