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ONTOLOGY REPORT - ANNOTATIONS


Term:antibiotic catabolic process
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Accession:GO:0017001 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.
Synonyms:exact_synonym: antibiotic breakdown;   antibiotic catabolism;   antibiotic degradation


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biphenyl catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ugt1a1 UDP glucuronosyltransferase family 1 member A1 JBrowse link 9 95,295,701 95,302,822 RGD:1600442
G Ugt2b17 UDP glucuronosyltransferase family 2 member B17 JBrowse link 14 22,724,399 22,736,148 RGD:1600442
ethanol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh1 alcohol dehydrogenase 1 (class I) JBrowse link 2 243,550,655 243,562,243 RGD:1624291
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide JBrowse link 2 243,728,500 243,740,907 RGD:5129089
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link 2 243,500,540 243,516,865 RGD:1624291
RGD:1600115
G Aldh1a7 aldehyde dehydrogenase family 1, subfamily A7 JBrowse link 1 240,584,233 240,601,843 RGD:1600115
G Aldh1b1 aldehyde dehydrogenase 1 family, member B1 JBrowse link 5 61,382,351 61,387,359 RGD:1600115
G Aldh2 aldehyde dehydrogenase 2 family member JBrowse link 12 40,466,418 40,498,813 RGD:1600115
G Aldh3b1 aldehyde dehydrogenase 3 family, member B1 JBrowse link 1 219,145,457 219,181,536 RGD:1600115
G LOC100910235 sulfotransferase 1C1-like JBrowse link 9 4,323,997 4,328,175 RGD:1624291
G Sult1a1 sulfotransferase family 1A member 1 JBrowse link 1 198,100,586 198,104,106 RGD:1624291
G Sult1b1 sulfotransferase family 1B member 1 JBrowse link 14 22,142,412 22,155,246 RGD:1624291
G Sult1e1 sulfotransferase family 1E member 1 JBrowse link 14 22,070,861 22,089,264 RGD:1624291
G Sult2a1 sulfotransferase family 2A member 1 JBrowse link 1 76,558,721 76,614,315 RGD:1624291
farnesol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1b10 aldo-keto reductase family 1 member B10 JBrowse link 4 61,813,265 61,830,371 RGD:1624291
G Akr1c3 aldo-keto reductase family 1, member C3 JBrowse link 17 69,761,126 69,778,021 RGD:1624291
formaldehyde catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AABR07062298.1 RGD:1600115
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide JBrowse link 2 243,702,035 243,720,063 RGD:13792537
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide JBrowse link 2 243,728,500 243,740,907 RGD:1624291
RGD:13792537
G Esd esterase D JBrowse link 15 56,756,848 56,776,348 RGD:1600115
hydrogen peroxide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:1624291
RGD:1600115
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:1358492
RGD:13792537
RGD:1624291
RGD:2292202
G Duox1 dual oxidase 1 JBrowse link 3 114,251,794 114,286,827 RGD:1600115
G Duox2 dual oxidase 2 JBrowse link 3 114,218,187 114,237,808 RGD:1600115
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:1624364
RGD:1600115
RGD:13792537
RGD:1624291
G Gpx3 glutathione peroxidase 3 JBrowse link 10 40,247,436 40,255,423 RGD:1624364
RGD:13792537
RGD:1600115
RGD:1624291
G Hba-a1 hemoglobin alpha, adult chain 1 JBrowse link 10 15,602,794 15,603,649 RGD:13792537
G Hba-a2 hemoglobin alpha, adult chain 2 JBrowse link 10 15,589,364 15,590,207 RGD:1624291
RGD:13792537
G Hba-a3 hemoglobin alpha, adult chain 3 JBrowse link 10 15,577,249 15,577,977 RGD:13792537
G Hbb hemoglobin subunit beta JBrowse link 1 168,971,269 168,972,680 RGD:1624291
RGD:13792537
G Hbb-bs hemoglobin, beta adult s chain JBrowse link 1 168,964,202 168,965,568 RGD:13792537
G Hbe1 hemoglobin subunit epsilon 1 JBrowse link 1 169,003,904 169,005,184 RGD:13792537
G Hbe2 hemoglobin, epsilon 2 JBrowse link 1 169,000,133 169,001,761 RGD:13792537
G Hbg1 hemoglobin subunit gamma 1 JBrowse link 1 168,992,841 168,994,219 RGD:13792537
G Hbz hemoglobin subunit zeta JBrowse link 10 15,609,348 15,610,826 RGD:13792537
G LOC100134871 beta globin minor gene JBrowse link 1 168,957,460 168,958,836 RGD:13792537
G LOC103694857 hemoglobin subunit beta-2 RGD:13792537
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:1624291
G Prdx1 peroxiredoxin 1 JBrowse link 5 135,536,413 135,551,986 RGD:1624291
G Prdx2 peroxiredoxin 2 JBrowse link 19 26,084,816 26,090,095 RGD:1624291
RGD:1600115
G Prdx3 peroxiredoxin 3 JBrowse link 1 282,238,774 282,251,193 RGD:1600115
RGD:1624291
G Prdx5 peroxiredoxin 5 JBrowse link 1 222,164,462 222,167,447 RGD:1624291
RGD:13792537
G Prdx6 peroxiredoxin 6 JBrowse link 13 79,077,567 79,088,113 RGD:729495
G Pxdn peroxidasin JBrowse link 6 48,866,496 48,982,368 RGD:1624291
G Tpo thyroid peroxidase JBrowse link 6 49,020,918 49,089,855 RGD:1600115
G Txnrd1 thioredoxin reductase 1 JBrowse link 7 26,946,124 26,984,400 RGD:634378
N-acetylneuraminate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amdhd2 amidohydrolase domain containing 2 JBrowse link 10 13,528,400 13,536,949 RGD:1600115
G Gnpda1 glucosamine-6-phosphate deaminase 1 JBrowse link 18 31,479,117 31,489,154 RGD:13792537
G Gnpda2 glucosamine-6-phosphate deaminase 2 JBrowse link 14 62,628,102 62,646,158 RGD:13792537
G Nagk N-acetylglucosamine kinase JBrowse link 4 115,473,848 115,485,027 RGD:1600115
G Npl N-acetylneuraminate pyruvate lyase JBrowse link 13 70,938,073 70,981,179 RGD:1600115
G Renbp renin binding protein JBrowse link X 156,854,490 156,863,548 RGD:1600115
negative regulation of hydrogen peroxide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hp haptoglobin JBrowse link 19 42,096,255 42,100,805 RGD:1624291
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:625483
positive regulation of hydrogen peroxide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nnt nicotinamide nucleotide transhydrogenase JBrowse link 2 52,189,523 52,283,095 RGD:13513981
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1624291
propionate catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pck1 phosphoenolpyruvate carboxykinase 1 JBrowse link 3 171,213,936 171,219,885 RGD:13792537

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19576
    metabolic process 11899
      catabolic process 2481
        cellular catabolic process 2120
          antibiotic catabolic process 56
            (+)-lariciresinol catabolic process 0
            2-deoxystreptamine catabolic process 0
            3-phenylpropionate catabolic process 0
            N-acetylneuraminate catabolic process 6
            acetate catabolic process + 0
            acrylonitrile catabolic process 0
            actinorhodin catabolic process 0
            aminoglycoside antibiotic catabolic process + 0
            bacitracin A catabolic process 0
            benzoate catabolic process + 0
            beta-lactam antibiotic catabolic process + 0
            biphenyl catabolic process 2
            blasticidin S catabolic process 0
            candicidin catabolic process 0
            citrate catabolic process to diacetyl 0
            cordyol C catabolic process 0
            cresol catabolic process + 0
            curcumin catabolic process 0
            endogenous antibiotic catabolic process 0
            erythromycin catabolic process 0
            ethanol catabolic process + 12
            exogenous antibiotic catabolic process 0
            farnesol catabolic process 2
            formaldehyde catabolic process 4
            formate catabolic process 0
            fumagillin catabolic process 0
            gliotoxin catabolic process 0
            granaticin catabolic process 0
            hydrogen peroxide catabolic process + 30
            lincomycin catabolic process 0
            mandelate catabolic process + 0
            monensin A catabolic process 0
            oxytetracycline catabolic process 0
            pentachlorophenol catabolic process 0
            pentalenolactone catabolic process 0
            peptide antibiotic catabolic process + 0
            phenol catabolic process 0
            propionate catabolic process + 1
            quercetin catabolic process 0
            salicylic acid catabolic process 0
            tetracenomycin C catabolic process 0
            tobramycin catabolic process 0
            vistamycin catabolic process 0
Path 2
Term Annotations click to browse term
  biological_process 19576
    cellular process 18361
      cellular metabolic process 10737
        drug metabolic process 591
          antibiotic metabolic process 129
            antibiotic catabolic process 56
              (+)-lariciresinol catabolic process 0
              2-deoxystreptamine catabolic process 0
              3-phenylpropionate catabolic process 0
              N-acetylneuraminate catabolic process 6
              acetate catabolic process + 0
              acrylonitrile catabolic process 0
              actinorhodin catabolic process 0
              aminoglycoside antibiotic catabolic process + 0
              bacitracin A catabolic process 0
              benzoate catabolic process + 0
              beta-lactam antibiotic catabolic process + 0
              biphenyl catabolic process 2
              blasticidin S catabolic process 0
              candicidin catabolic process 0
              citrate catabolic process to diacetyl 0
              cordyol C catabolic process 0
              cresol catabolic process + 0
              curcumin catabolic process 0
              endogenous antibiotic catabolic process 0
              erythromycin catabolic process 0
              ethanol catabolic process + 12
              exogenous antibiotic catabolic process 0
              farnesol catabolic process 2
              formaldehyde catabolic process 4
              formate catabolic process 0
              fumagillin catabolic process 0
              gliotoxin catabolic process 0
              granaticin catabolic process 0
              hydrogen peroxide catabolic process + 30
              lincomycin catabolic process 0
              mandelate catabolic process + 0
              monensin A catabolic process 0
              oxytetracycline catabolic process 0
              pentachlorophenol catabolic process 0
              pentalenolactone catabolic process 0
              peptide antibiotic catabolic process + 0
              phenol catabolic process 0
              propionate catabolic process + 1
              quercetin catabolic process 0
              salicylic acid catabolic process 0
              tetracenomycin C catabolic process 0
              tobramycin catabolic process 0
              vistamycin catabolic process 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.