Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:racemase and epimerase activity, acting on carbohydrates and derivatives
go back to main search page
Accession:GO:0016857 term browser browse the term
Definition:Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule.
Synonyms:xref: EC:5.1.3;   reactome:R-HSA-6787677 "FUOM isomerises alpha-Fuc to beta-Fuc"


show annotations for term's descendants           Sort by:
racemase and epimerase activity, acting on carbohydrates and derivatives term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuom fucose mutarotase enables IBA
ISO		 GO_REF:0000033
(PMID:17602138), (PMID:19524593)		 GO_Central
RGD		 PMID:17602138 PMID:19524593 GO_REF:0000033 NCBI chr 1:194,888,535...194,893,046
Ensembl chr 1:194,886,709...194,893,046 		JBrowse link
G Glce glucuronic acid epimerase enables ISO MGI:2670565 (PMID:11274177), (PMID:11279150), (PMID:12788935) RGD PMID:11274177 PMID:11279150 PMID:12788935 NCBI chr 8:62,546,104...62,612,144
Ensembl chr 8:62,546,107...62,612,040 		JBrowse link
aldose 1-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galm galactose mutarotase enables ISO
IBA
IEA		 (PMID:12753898), (PMID:30451973)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:12753898 PMID:30451973 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:14,837,540...14,889,484
Ensembl chr 6:14,837,548...14,889,310 		JBrowse link
chondroitin-glucuronate 5-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dse dermatan sulfate epimerase enables ISO
IBA		 (PMID:16505484)
GO_REF:0000033		 RGD
GO_Central		 PMID:16505484 GO_REF:0000033 NCBI chr20:26,118,194...26,196,889
Ensembl chr20:26,118,196...26,196,992 		JBrowse link
G Dsel dermatan sulfate epimerase-like enables IBA
ISO		 GO_REF:0000033
MGI:5583872 (PMID:22496542)		 GO_Central
RGD		 PMID:22496542 GO_REF:0000033 NCBI chr13:186,413...192,592
Ensembl chr13:175,805...192,647 		JBrowse link
D-ribulose-phosphate 3-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpe ribulose-5-phosphate-3-epimerase enables IDA
ISO
IBA		 (PMID:5360673)
GO_REF:0000033
(PMID:20923965)		 RGD
GO_Central		 PMID:5360673 PMID:20923965 PMID:3079759 PMID:2843500 GO_REF:0000033, RGD:1641816, RGD:1599574 NCBI chr 9:68,191,027...68,211,295
Ensembl chr 9:68,191,292...68,211,591 		JBrowse link
GDP-mannose 3,5-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfus GDP-L-fucose synthase enables ISO (PMID:8910301) RGD PMID:8910301 NCBI chr 7:107,612,087...107,617,005
Ensembl chr 7:107,612,094...107,616,948 		JBrowse link
heparosan-N-sulfate-glucuronate 5-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glce glucuronic acid epimerase enables ISO
IBA		 (PMID:15853773), (PMID:20118238), (PMID:30872481)
(PMID:11279150)
GO_REF:0000033		 RGD
GO_Central		 PMID:11279150 PMID:15853773 PMID:20118238 PMID:30872481 GO_REF:0000033 NCBI chr 8:62,546,104...62,612,144
Ensembl chr 8:62,546,107...62,612,040 		JBrowse link
L-fucose mutarotase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuom fucose mutarotase enables ISO (PMID:19524593) RGD PMID:19524593 NCBI chr 1:194,888,535...194,893,046
Ensembl chr 1:194,886,709...194,893,046 		JBrowse link
N-acylglucosamine 2-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Renbp renin binding protein enables IMP
IDA
ISO
IBA
IEA		 (PMID:10502668), (PMID:12499362), (PMID:9990133)
(PMID:8663114)
GO_REF:0000033
MGI:2386397 (PMID:10809771), (PMID:22692205)
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:8663114 PMID:9990133 PMID:10502668 PMID:10809771 PMID:12499362 More... GO_REF:0000033 GO_REF:0000107, RGD:727355, RGD:5132612, RGD:5132613 NCBI chr  X:151,661,463...151,670,538
Ensembl chr  X:151,661,458...151,670,516 		JBrowse link
UDP-glucose 4-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gale UDP-galactose-4-epimerase enables IEA
ISO
IBA		 GO_REF:0000003
(PMID:14741191), (PMID:28877911)
GO_REF:0000033
GO_REF:0000117
(PMID:16302980)		 UniProt
RGD
GO_Central		 PMID:14741191 PMID:16302980 PMID:28877911 GO_REF:0000003 GO_REF:0000033 GO_REF:0000117 NCBI chr 5:148,193,886...148,198,392
Ensembl chr 5:148,194,791...148,198,388 		JBrowse link
UDP-N-acetylglucosamine 2-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase enables IDA
IEA
ISO
IBA		 PMID:10334995
PMID:10497249
GO_REF:0000107
PMID:9305887
(PMID:14707127), (PMID:26980148), (PMID:2808337)
GO_REF:0000033
MGI:3713799 (PMID:10745088), (PMID:11929971), (PMID:17549255)		 Ensembl
RGD
GO_Central		 PMID:2808337 PMID:10745088 PMID:11929971 PMID:14707127 PMID:17549255 More... GO_REF:0000033 GO_REF:0000107, RGD:68786, RGD:401901215, RGD:401901233, RGD:401901241 NCBI chr 5:58,267,189...58,307,396
Ensembl chr 5:58,267,210...58,307,499 		JBrowse link
UDP-N-acetylglucosamine 4-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gale UDP-galactose-4-epimerase enables IEA GO_REF:0000003
GO_REF:0000116		 UniProt
RHEA		 GO_REF:0000003 GO_REF:0000116 NCBI chr 5:148,193,886...148,198,392
Ensembl chr 5:148,194,791...148,198,388 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20633
    catalytic activity 6032
      isomerase activity 212
        racemase and epimerase activity 17
          racemase and epimerase activity, acting on carbohydrates and derivatives 10
            ADP-glyceromanno-heptose 6-epimerase activity 0
            CDP-abequose epimerase activity 0
            D-ribulose-phosphate 3-epimerase activity 1
            GDP-mannose 3,5-epimerase activity 1
            L-fucose mutarotase activity 1
            L-rhamnose mutarotase activity 0
            L-ribulose-5-phosphate 3-epimerase activity 0
            L-ribulose-phosphate 4-epimerase activity 0
            N-acylglucosamine 2-epimerase activity 1
            N-acylglucosamine-6-phosphate 2-epimerase activity 0
            UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity 0
            UDP-N-acetylglucosamine 2-epimerase activity 1
            UDP-N-acetylglucosamine 4-epimerase activity 1
            UDP-arabinose 4-epimerase activity 0
            UDP-glucosamine 4-epimerase activity 0
            UDP-glucose 4-epimerase activity 1
            UDP-glucuronate 4-epimerase activity 0
            UDP-glucuronate 5'-epimerase activity 0
            aldose 1-epimerase activity 1
            allulose 6-phosphate 3-epimerase activity 0
            cellobiose epimerase activity 0
            chondroitin-glucuronate 5-epimerase activity 2
            dTDP-4-dehydrorhamnose 3,5-epimerase activity 0
            glucose-6-phosphate 1-epimerase activity 0
            heparosan-N-sulfate-glucuronate 5-epimerase activity 1
            maltose epimerase activity 0
paths to the root