Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:racemase and epimerase activity, acting on carbohydrates and derivatives
go back to main search page
Accession:GO:0016857 term browser browse the term
Definition:Catalysis of a reaction that alters the configuration of one or more chiral centers in a carbohydrate molecule.
Synonyms:xref: EC:5.1.3;   reactome:R-HSA-6787677 "FUOM isomerises alpha-Fuc to beta-Fuc"


show annotations for term's descendants           Sort by:
racemase and epimerase activity, acting on carbohydrates and derivatives term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FUOM fucose mutarotase enables IEA TreeGrafter GO_REF:0000118 Ensembl chr10:134,267,265...134,274,665 JBrowse link
G GLCE glucuronic acid epimerase enables IEA Ensembl GO_REF:0000107 NCBI chr15:48,110,725...48,222,251
Ensembl chr15:66,979,271...66,995,646 		JBrowse link
G RPE ribulose-5-phosphate-3-epimerase enables IEA InterPro GO_REF:0000002 NCBI chr2B:97,260,348...97,282,397 JBrowse link
aldose 1-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALM galactose mutarotase enables IEA UniProt
RHEA
TreeGrafter
Ensembl		 GO_REF:0000003 GO_REF:0000107 GO_REF:0000116 GO_REF:0000118 NCBI chr2A:38,697,338...38,770,470
Ensembl chr2A:39,456,786...39,527,116 		JBrowse link
chondroitin-glucuronate 5-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DSE dermatan sulfate epimerase enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 6:114,173,641...114,246,129
Ensembl chr 6:118,347,786...118,386,193 		JBrowse link
G DSEL dermatan sulfate epimerase like enables ISO (PMID:22496542) MGI PMID:22496542 NCBI chr18:60,880,241...60,890,372 JBrowse link
D-ribulose-phosphate 3-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPE ribulose-5-phosphate-3-epimerase enables ISO
IEA		 RGD
InterPro
UniProt
RHEA		 PMID:2843500 PMID:3079759 GO_REF:0000002 GO_REF:0000003 GO_REF:0000116 RGD:1599574 RGD:1641816 NCBI chr2B:97,260,348...97,282,397 JBrowse link
GDP-mannose 3,5-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFUS GDP-L-fucose synthase enables IEA Ensembl GO_REF:0000107 NCBI chr 8:140,366,003...140,371,018
Ensembl chr 8:143,381,054...143,386,008 		JBrowse link
heparosan-N-sulfate-glucuronate 5-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLCE glucuronic acid epimerase enables IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000118 NCBI chr15:48,110,725...48,222,251
Ensembl chr15:66,979,271...66,995,646 		JBrowse link
L-fucose mutarotase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FUOM fucose mutarotase enables ISO (PMID:19524593) UniProt PMID:19524593 Ensembl chr10:134,267,265...134,274,665 JBrowse link
N-acylglucosamine 2-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RENBP renin binding protein enables ISO
IEA		 RGD
UniProt
Ensembl		 PMID:11726282 PMID:11926999 PMID:16011304 GO_REF:0000003 GO_REF:0000107 RGD:5132612 RGD:5132613 RGD:727355 NCBI chr  X:143,490,103...143,499,487
Ensembl chr  X:153,376,847...153,386,214 		JBrowse link
UDP-glucose 4-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALE UDP-galactose-4-epimerase enables IEA Ensembl
TreeGrafter
UniProt
InterPro
RHEA		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000104 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000118 NCBI chr 1:22,987,218...22,992,416
Ensembl chr 1:23,971,454...23,976,500 		JBrowse link
UDP-N-acetylglucosamine 2-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:9305888 GO_REF:0000107 GO_REF:0000118 RGD:68786 NCBI chr 9:36,064,128...36,107,822
Ensembl chr 9:36,867,096...36,926,588 		JBrowse link
UDP-N-acetylglucosamine 4-epimerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GALE UDP-galactose-4-epimerase enables IEA RHEA
UniProt		 GO_REF:0000003 GO_REF:0000116 NCBI chr 1:22,987,218...22,992,416
Ensembl chr 1:23,971,454...23,976,500 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17686
    catalytic activity 5353
      isomerase activity 176
        racemase and epimerase activity 18
          racemase and epimerase activity, acting on carbohydrates and derivatives 10
            ADP-glyceromanno-heptose 6-epimerase activity 0
            CDP-abequose epimerase activity 0
            D-ribulose-phosphate 3-epimerase activity 1
            GDP-mannose 3,5-epimerase activity 1
            L-fucose mutarotase activity 1
            L-rhamnose mutarotase activity 0
            L-ribulose-5-phosphate 3-epimerase activity 0
            L-ribulose-phosphate 4-epimerase activity 0
            N-acylglucosamine 2-epimerase activity 1
            N-acylglucosamine-6-phosphate 2-epimerase activity 0
            UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity 0
            UDP-N-acetylglucosamine 2-epimerase activity 1
            UDP-N-acetylglucosamine 4-epimerase activity 1
            UDP-arabinose 4-epimerase activity 0
            UDP-glucosamine 4-epimerase activity 0
            UDP-glucose 4-epimerase activity 1
            UDP-glucuronate 4-epimerase activity 0
            UDP-glucuronate 5'-epimerase activity 0
            aldose 1-epimerase activity 1
            allulose 6-phosphate 3-epimerase activity 0
            cellobiose epimerase activity 0
            chondroitin-glucuronate 5-epimerase activity 2
            dTDP-4-dehydrorhamnose 3,5-epimerase activity 0
            glucose-6-phosphate 1-epimerase activity 0
            heparosan-N-sulfate-glucuronate 5-epimerase activity 1
            maltose epimerase activity 0
paths to the root