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ONTOLOGY REPORT - ANNOTATIONS

Term:carbon-carbon lyase activity
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Accession:GO:0016830 term browser browse the term
Definition:Catalysis of the cleavage of C-C bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.
Synonyms:narrow_synonym: other carbon-carbon lyase activity
 xref: EC:4.1;   Reactome:R-HSA-189425 "UROD decarboxylates URO3 to COPRO3";   Reactome:R-HSA-190182 "UROD decarboxylates URO1 to COPRO1";   reactome:R-HSA-389611 "2-hydroxyphytanoyl-CoA => pristanal + formyl-CoA"

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show annotations for term's descendants           Sort by:
carbon-carbon lyase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936512:10,447,457...10,475,231
Ensembl chrNW_004936512:10,447,461...10,474,985 		JBrowse link
G Gad1 glutamate decarboxylase 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936509:1,160,559...1,201,037
Ensembl chrNW_004936509:1,161,094...1,201,576 		JBrowse link
G Hacl1 2-hydroxyacyl-CoA lyase 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:2,823,183...2,856,077
Ensembl chrNW_004936473:2,823,123...2,856,077 		JBrowse link
G Pdxdc1 pyridoxal dependent decarboxylase domain containing 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936501:2,946,402...3,001,712
Ensembl chrNW_004936501:2,946,669...3,001,553 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936521:7,850,370...7,899,998
Ensembl chrNW_004936521:7,848,972...7,900,041 		JBrowse link
(S)-citramalyl-CoA lyase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clybl citramalyl-CoA lyase enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936472:10,666,345...10,919,694
Ensembl chrNW_004936472:10,686,927...10,919,702 		JBrowse link
2-hydroxyacyl-CoA lyase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hacl1 2-hydroxyacyl-CoA lyase 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:2,823,183...2,856,077
Ensembl chrNW_004936473:2,823,123...2,856,077 		JBrowse link
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase enables IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000003 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
4-hydroxy-2-oxoglutarate aldolase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 enables IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000003 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936636:2,101,184...2,125,377
Ensembl chrNW_004936636:2,102,036...2,125,532 		JBrowse link
5-amino-4-imidazole carboxylate lyase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961407 phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase enables IEA UniProt GO_REF:0000003 NCBI chrNW_004936482:18,649,093...18,664,629
Ensembl chrNW_004936482:18,626,015...18,667,164 		JBrowse link
5-hydroxy-L-tryptophan decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddc dopa decarboxylase enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936686:1,322,153...1,405,434
Ensembl chrNW_004936686:1,301,207...1,405,384 		JBrowse link
aconitate decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936511:4,322,198...4,326,562
Ensembl chrNW_004936511:4,322,198...4,329,686 		JBrowse link
adenosylmethionine decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amd1 adenosylmethionine decarboxylase 1 enables ISO
IEA		 RGD
TreeGrafter
UniProt
InterPro
RHEA		 PMID:1415709 PMID:10430362 PMID:21048303 GO_REF:0000002 GO_REF:0000003 GO_REF:0000116 GO_REF:0000118 RGD:1578320 RGD:7242909 RGD:7242912 NCBI chrNW_004936564:6,656,789...6,675,564
Ensembl chrNW_004936564:6,656,746...6,673,462 		JBrowse link
aminocarboxymuconate-semialdehyde decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase enables
NOT|enables		 ISO
IEA		 (PMID:17288562) RGD
RHEA
UniProt
Ensembl
ParkinsonsUK-UCL		 PMID:11802786 PMID:17288562 GO_REF:0000003 GO_REF:0000104 GO_REF:0000107 GO_REF:0000116 RGD:70243 NCBI chrNW_004936469:40,858,338...40,904,807
Ensembl chrNW_004936469:40,858,338...40,904,807 		JBrowse link
arginine decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azin2 antizyme inhibitor 2 NOT|enables ISO (PMID:16916800) MGI PMID:16916800 NCBI chrNW_004936474:15,941,655...15,973,481
Ensembl chrNW_004936474:15,941,620...15,973,745 		JBrowse link
aromatic-L-amino-acid decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddc dopa decarboxylase enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:3379830 PMID:10569946 PMID:12047348 PMID:12703659 GO_REF:0000107 GO_REF:0000118 RGD:4139893 RGD:4139897 RGD:4139900 RGD:727571 NCBI chrNW_004936686:1,322,153...1,405,434
Ensembl chrNW_004936686:1,301,207...1,405,384 		JBrowse link
aspartate 1-decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgpl1 sphingosine-1-phosphate lyase 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936521:7,850,370...7,899,998
Ensembl chrNW_004936521:7,848,972...7,900,041 		JBrowse link
carboxy-lyase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936469:40,858,338...40,904,807
Ensembl chrNW_004936469:40,858,338...40,904,807 		JBrowse link
G Amd1 adenosylmethionine decarboxylase 1 enables IEA UniProt GO_REF:0000043 NCBI chrNW_004936564:6,656,789...6,675,564
Ensembl chrNW_004936564:6,656,746...6,673,462 		JBrowse link
G Azin2 antizyme inhibitor 2 enables IEA UniProt GO_REF:0000117 NCBI chrNW_004936474:15,941,655...15,973,481
Ensembl chrNW_004936474:15,941,620...15,973,745 		JBrowse link
G Ddc dopa decarboxylase enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936686:1,322,153...1,405,434
Ensembl chrNW_004936686:1,301,207...1,405,384 		JBrowse link
G Echdc1 ethylmalonyl-CoA decarboxylase 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936639:2,351,777...2,394,539
Ensembl chrNW_004936639:2,351,372...2,397,027 		JBrowse link
G Gad1 glutamate decarboxylase 1 enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936509:1,160,559...1,201,037
Ensembl chrNW_004936509:1,161,094...1,201,576 		JBrowse link
G Gad2 glutamate decarboxylase 2 enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936484:1,737,806...1,810,378
Ensembl chrNW_004936484:1,737,520...1,810,398 		JBrowse link
G Gadl1 glutamate decarboxylase like 1 enables IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936473:21,430,668...21,563,241
Ensembl chrNW_004936473:21,431,071...21,563,226 		JBrowse link
G Hdc histidine decarboxylase enables IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936471:12,303,802...12,324,613
Ensembl chrNW_004936471:12,304,130...12,324,570 		JBrowse link
G LOC101961407 phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase enables IEA UniProt GO_REF:0000043 NCBI chrNW_004936482:18,649,093...18,664,629
Ensembl chrNW_004936482:18,626,015...18,667,164 		JBrowse link
G Odc1 ornithine decarboxylase 1 enables IEA UniProt GO_REF:0000117 NCBI chrNW_004936532:6,581,717...6,587,116 JBrowse link
G Pck1 phosphoenolpyruvate carboxykinase 1 enables IEA UniProt GO_REF:0000043 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial enables IEA UniProt GO_REF:0000043 NCBI chrNW_004936722:428,473...450,452
Ensembl chrNW_004936722:428,307...437,328 		JBrowse link
G Pisd phosphatidylserine decarboxylase enables IEA UniProt GO_REF:0000043 NCBI chrNW_004936755:665,416...767,597
Ensembl chrNW_004936755:712,278...767,728 		JBrowse link
G Umps uridine monophosphate synthetase enables IEA UniProt GO_REF:0000043 NCBI chrNW_004936725:553,278...564,846
Ensembl chrNW_004936725:549,804...565,141 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase enables IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Urod uroporphyrinogen decarboxylase enables IEA UniProt GO_REF:0000043 NCBI chrNW_004936474:26,207,169...26,210,599
Ensembl chrNW_004936474:26,207,169...26,210,623 		JBrowse link
G Uxs1 UDP-glucuronate decarboxylase 1 enables IEA UniProt GO_REF:0000043 NCBI chrNW_004936729:5,056...99,755
Ensembl chrNW_004936729:4,916...99,818 		JBrowse link
D-dopachrome decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101963449 D-dopachrome decarboxylase enables ISO (PMID:9480844)
PMID:8267597
(PMID:8267597)		 UniProt PMID:8267597 PMID:9480844 RGD:151356628 NCBI chrNW_004936619:1,043,006...1,045,054 JBrowse link
deoxyribodipyrimidine photo-lyase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cry1 cryptochrome circadian regulator 1 NOT|enables ISO (PMID:8909283) UniProt PMID:8909283 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 NOT|enables ISO (PMID:8909283) UniProt PMID:8909283 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480 		JBrowse link
deoxyribose-phosphate aldolase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase enables IEA InterPro
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936587:1,555,534...1,665,217
Ensembl chrNW_004936587:1,555,531...1,665,289 		JBrowse link
diphosphomevalonate decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvd mevalonate diphosphate decarboxylase enables ISO
IEA		 RGD
TreeGrafter
RHEA
InterPro
UniProt
Ensembl		 PMID:197206 PMID:9348097 GO_REF:0000002 GO_REF:0000003 GO_REF:0000104 GO_REF:0000107 GO_REF:0000116 GO_REF:0000118 RGD:2311302 RGD:2316852 NCBI chrNW_004936641:1,030,465...1,035,967
Ensembl chrNW_004936641:1,030,595...1,035,954 		JBrowse link
DNA (6-4) photolyase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cry1 cryptochrome circadian regulator 1 NOT|enables ISO (PMID:8909283) UniProt PMID:8909283 NCBI chrNW_004936492:7,929,138...7,994,797
Ensembl chrNW_004936492:7,929,138...7,995,579 		JBrowse link
G Cry2 cryptochrome circadian regulator 2 NOT|enables ISO (PMID:8909283) UniProt PMID:8909283 NCBI chrNW_004936562:3,133,849...3,168,472
Ensembl chrNW_004936562:3,133,633...3,168,480 		JBrowse link
fructose 6-phosphate aldolase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armt1 acidic residue methyltransferase 1 enables IEA RHEA GO_REF:0000116 NCBI chrNW_004936489:4,344,074...4,355,405
Ensembl chrNW_004936489:4,344,365...4,355,484 		JBrowse link
fructose-1-phosphate aldolase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldob aldolase, fructose-bisphosphate B enables IEA Ensembl
TreeGrafter
RHEA		 GO_REF:0000107 GO_REF:0000116 GO_REF:0000118 NCBI chrNW_004936524:9,584,302...9,592,961
Ensembl chrNW_004936524:9,584,140...9,596,276 		JBrowse link
fructose-bisphosphate aldolase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoa aldolase, fructose-bisphosphate A enables IEA InterPro
TreeGrafter
UniProt
RHEA
Ensembl		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000116 GO_REF:0000118 NCBI chrNW_004936501:12,418,090...12,423,959
Ensembl chrNW_004936501:12,418,090...12,422,689 		JBrowse link
G Aldob aldolase, fructose-bisphosphate B enables IEA
ISO		 InterPro
TreeGrafter
RGD
UniProt
RHEA
Ensembl		 PMID:9448062 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000116 GO_REF:0000118 RGD:2302096 NCBI chrNW_004936524:9,584,302...9,592,961
Ensembl chrNW_004936524:9,584,140...9,596,276 		JBrowse link
G Aldoc aldolase, fructose-bisphosphate C enables ISO
IEA		 RGD
TreeGrafter
Ensembl
RHEA
UniProt
InterPro		 PMID:198211 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000116 GO_REF:0000118 RGD:2301138 NCBI chrNW_004936538:4,798,991...4,802,700
Ensembl chrNW_004936538:4,798,989...4,802,994 		JBrowse link
gamma-glutamyl carboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggcx gamma-glutamyl carboxylase enables ISO
IEA		 RGD
TreeGrafter
Ensembl
InterPro
UniProt		 PMID:12754193 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000118 RGD:1582507 NCBI chrNW_004936712:1,696,264...1,709,087
Ensembl chrNW_004936712:1,699,750...1,709,087 		JBrowse link
glutamate decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad1 glutamate decarboxylase 1 enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:1924335 PMID:10812196 PMID:17712632 GO_REF:0000107 GO_REF:0000118 RGD:6480258 RGD:6480261 RGD:728511 NCBI chrNW_004936509:1,160,559...1,201,037
Ensembl chrNW_004936509:1,161,094...1,201,576 		JBrowse link
G Gad2 glutamate decarboxylase 2 enables ISO
IEA		 RGD
TreeGrafter		 PMID:8999827 PMID:10812196 GO_REF:0000118 RGD:1625237 RGD:6480261 NCBI chrNW_004936484:1,737,806...1,810,378
Ensembl chrNW_004936484:1,737,520...1,810,398 		JBrowse link
GTP 3',8'-cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mocs1 molybdenum cofactor synthesis 1 enables IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000003 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:19,743,052...19,771,132
Ensembl chrNW_004936476:19,743,024...19,775,300 		JBrowse link
histidine decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdc histidine decarboxylase enables ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:5898 PMID:4449071 PMID:7075603 PMID:9525922 PMID:12204113 More... GO_REF:0000107 GO_REF:0000118 RGD:2303726 RGD:2303727 RGD:2303728 RGD:2303733 RGD:2303734 RGD:2303735 NCBI chrNW_004936471:12,303,802...12,324,613
Ensembl chrNW_004936471:12,304,130...12,324,570 		JBrowse link
hydroxymethylglutaryl-CoA lyase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase enables ISO
IEA		 RGD
TreeGrafter
Ensembl
UniProt
InterPro		 PMID:2573547 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000118 RGD:1599519 NCBI chrNW_004936474:8,955,216...8,971,078
Ensembl chrNW_004936474:8,954,379...8,971,132 		JBrowse link
G Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 enables IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000003 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:5,600,154...5,735,721
Ensembl chrNW_004936476:5,600,278...5,733,226 		JBrowse link
L-allo-threonine aldolase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101975053 probable low-specificity L-threonine aldolase 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:2,846,435...2,852,176 JBrowse link
G LOC101977937 probable low-specificity L-threonine aldolase 2 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:2,839,027...2,843,333 JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 ISO RGD PMID:3110140 RGD:2300383 NCBI chrNW_004936741:1,849,239...1,877,724
Ensembl chrNW_004936741:1,849,609...1,877,727 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 ISO RGD PMID:3110140 RGD:2300383 NCBI chrNW_004936646:1,422,844...1,427,929
Ensembl chrNW_004936646:1,422,817...1,429,037 		JBrowse link
L-dopa decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddc dopa decarboxylase enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936686:1,322,153...1,405,434
Ensembl chrNW_004936686:1,301,207...1,405,384 		JBrowse link
malonyl-CoA decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlycd malonyl-CoA decarboxylase enables ISO (PMID:10417274), (PMID:10455107), (PMID:15003260), (PMID:9869665)
(MGI:5501374|PMID:23746352)		 RGD
UniProt		 PMID:9869665 PMID:10417274 PMID:10455107 PMID:12065578 PMID:15003260 More... MGI:5501374 RGD:1600790 RGD:1600793 RGD:631891 NCBI chrNW_004936641:3,836,418...3,846,485 JBrowse link
N-acetylneuraminate lyase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Npl N-acetylneuraminate pyruvate lyase enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936481:6,942,128...6,977,042
Ensembl chrNW_004936481:6,942,282...6,972,775 		JBrowse link
ornithine decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Azin1 antizyme inhibitor 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:40,801,943...40,832,543
Ensembl chrNW_004936470:40,801,943...40,834,003 		JBrowse link
G Azin2 antizyme inhibitor 2 enables
NOT|enables		 IEA
ISO		 (PMID:16916800) TreeGrafter
MGI		 PMID:16916800 GO_REF:0000118 NCBI chrNW_004936474:15,941,655...15,973,481
Ensembl chrNW_004936474:15,941,620...15,973,745 		JBrowse link
G Odc1 ornithine decarboxylase 1 enables ISO
IEA		 RGD
TreeGrafter		 PMID:1415709 PMID:10430362 GO_REF:0000118 RGD:1578320 RGD:7242912 NCBI chrNW_004936532:6,581,717...6,587,116 JBrowse link
orotidine-5'-phosphate decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Umps uridine monophosphate synthetase enables ISO
IEA		 RGD
TreeGrafter
InterPro
UniProt
Ensembl		 PMID:6134725 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000118 RGD:5132277 NCBI chrNW_004936725:553,278...564,846
Ensembl chrNW_004936725:549,804...565,141 		JBrowse link
oxaloacetate decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fahd1 fumarylacetoacetate hydrolase domain containing 1 enables ISO (PMID:25575590) UniProt
MGI		 PMID:25575590 NCBI chrNW_004936694:2,179,730...2,181,296 JBrowse link
G Me1 malic enzyme 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:7,425,983...7,571,090
Ensembl chrNW_004936510:7,426,347...7,571,553 		JBrowse link
oxalyl-CoA decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hacl1 2-hydroxyacyl-CoA lyase 1 enables IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936473:2,823,183...2,856,077
Ensembl chrNW_004936473:2,823,123...2,856,077 		JBrowse link
oxo-acid-lyase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 enables IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:5,600,154...5,735,721
Ensembl chrNW_004936476:5,600,278...5,733,226 		JBrowse link
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 enables IEA UniProt GO_REF:0000117 NCBI chrNW_004936636:2,101,184...2,125,377
Ensembl chrNW_004936636:2,102,036...2,125,532 		JBrowse link
G Npl N-acetylneuraminate pyruvate lyase enables IEA UniProt GO_REF:0000117 NCBI chrNW_004936481:6,942,128...6,977,042
Ensembl chrNW_004936481:6,942,282...6,972,775 		JBrowse link
phosphatidylserine decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 enables IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:617,376...640,424
Ensembl chrNW_004936636:617,356...640,932 		JBrowse link
G Pisd phosphatidylserine decarboxylase enables IEA RHEA
TreeGrafter
InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000003 GO_REF:0000104 GO_REF:0000107 GO_REF:0000116 GO_REF:0000118 NCBI chrNW_004936755:665,416...767,597
Ensembl chrNW_004936755:712,278...767,728 		JBrowse link
phosphoenolpyruvate carboxykinase (GTP) activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 enables ISO
IEA		 RGD
TreeGrafter
UniProt
Ensembl
InterPro		 PMID:6049928 PMID:16125296 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:1601233 RGD:2302971 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial enables ISO
IEA		 RGD
TreeGrafter
Ensembl
UniProt
InterPro		 PMID:6049928 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:2302971 NCBI chrNW_004936722:428,473...450,452
Ensembl chrNW_004936722:428,307...437,328 		JBrowse link
phosphoenolpyruvate carboxykinase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 enables ISO
IEA		 RGD
Ensembl		 PMID:4303362 PMID:4353083 PMID:11440903 PMID:11820793 GO_REF:0000107 RGD:2302850 RGD:2302851 RGD:2302970 RGD:625518 NCBI chrNW_004936530:361,872...367,005
Ensembl chrNW_004936530:361,872...367,005 		JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial ISO RGD PMID:4353083 PMID:11440903 RGD:2302851 RGD:2302970 NCBI chrNW_004936722:428,473...450,452
Ensembl chrNW_004936722:428,307...437,328 		JBrowse link
phosphopantothenoylcysteine decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scamp5 secretory carrier membrane protein 5 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:33,936,721...33,958,439
Ensembl chrNW_004936471:33,936,531...33,958,573
Ensembl chrNW_004936471:33,936,531...33,958,573 		JBrowse link
phosphoribosylaminoimidazole carboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961407 phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase enables IEA UniProt
Ensembl		 GO_REF:0000003 GO_REF:0000107 NCBI chrNW_004936482:18,649,093...18,664,629
Ensembl chrNW_004936482:18,626,015...18,667,164 		JBrowse link
sphinganine-1-phosphate aldolase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgpl1 sphingosine-1-phosphate lyase 1 enables IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936521:7,850,370...7,899,998
Ensembl chrNW_004936521:7,848,972...7,900,041 		JBrowse link
sulfinoalanine decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase enables ISO
IEA		 RGD
TreeGrafter		 PMID:8029009 GO_REF:0000118 RGD:632638 NCBI chrNW_004936512:10,447,457...10,475,231
Ensembl chrNW_004936512:10,447,461...10,474,985 		JBrowse link
tRNA-4-demethylwyosine synthase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101974766 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 enables IEA UniProt GO_REF:0000003 NCBI chrNW_004936543:7,217,265...7,324,083 JBrowse link
UDP-glucuronate decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Uxs1 UDP-glucuronate decarboxylase 1 enables ISO
IEA		 RGD
TreeGrafter
UniProt
InterPro
Ensembl		 PMID:11877387 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:625412 NCBI chrNW_004936729:5,056...99,755
Ensembl chrNW_004936729:4,916...99,818 		JBrowse link
uroporphyrinogen decarboxylase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Urod uroporphyrinogen decarboxylase enables ISO
IEA		 RGD
TreeGrafter
UniProt
RHEA
InterPro
Ensembl		 PMID:15736160 GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000118 RGD:2301379 NCBI chrNW_004936474:26,207,169...26,210,599
Ensembl chrNW_004936474:26,207,169...26,210,623 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 17092
    catalytic activity 5314
      lyase activity 188
        carbon-carbon lyase activity 50
          (1-methylpentyl)succinate synthase activity 0
          2-iminoacetate synthase activity 0
          3,4-dihydroxy-2-butanone-4-phosphate synthase activity 0
          DNA photolyase activity + 2
          GTP 3',8'-cyclase activity 1
          aldehyde decarbonylase activity + 0
          aldehyde oxygenase (deformylating) activity 0
          aldehyde-lyase activity + 12
          benzylsuccinate synthase activity 0
          carboxy-lyase activity + 31
          oxo-acid-lyase activity + 6
          straight chain (R)-2-hydroxy fatty acyl-CoA lyase activity 0
          tryptophanase activity 0
          tyrosine phenol-lyase activity 0
paths to the root