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ONTOLOGY REPORT - ANNOTATIONS


Term:nuclear speck
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Accession:GO:0016607 term browser browse the term
Definition:A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
Synonyms:exact_synonym: nuclear speckle;   nuclear speckles;   splicing speckle
 narrow_synonym: speckle domain
 related_synonym: speckle focus


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nuclear speck term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AAGAB alpha and gamma adaptin binding protein IEA Ensembl GO_REF:0000107 NCBI chr 1:165,123,006...165,193,002
Ensembl chr 1:165,127,994...165,436,771
JBrowse link
G ABITRAM actin binding transcription modulator ISO (MGI:MGI:5574158|PMID:24349419), (MGI:MGI:5828457|PMID:26013685) MGI PMID:24349419, PMID:26013685 MGI:MGI:5574158, MGI:MGI:5828457 NCBI chr 1:249,898,994...249,905,397 JBrowse link
G ACIN1 apoptotic chromatin condensation inducer 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:75,951,203...75,989,234
Ensembl chr 7:75,951,203...75,989,231
JBrowse link
G ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 IEA Ensembl GO_REF:0000107 NCBI chr 4:89,260,354...89,269,238
Ensembl chr 4:89,260,460...89,269,245
JBrowse link
G ADAR adenosine deaminase RNA specific ISO RGD PMID:12665561 RGD:10755332 NCBI chr 4:95,154,230...95,197,308
Ensembl chr 4:95,154,358...95,197,305
JBrowse link
G AFDN afadin, adherens junction formation factor IEA Ensembl GO_REF:0000107 NCBI chr 1:1,569,652...1,698,475
Ensembl chr 1:1,569,655...1,698,776
JBrowse link
G AFF2 AF4/FMR2 family member 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:120,777,559...121,263,574
Ensembl chr  X:120,777,237...121,263,574
JBrowse link
G AK6 adenylate kinase 6 IEA Ensembl GO_REF:0000107 NCBI chr16:47,480,556...47,499,656
Ensembl chr16:47,480,557...47,499,700
JBrowse link
G AKAP17A A-kinase anchoring protein 17A IBA (PMID:21873635) GO_Central PMID:21873635
G AKAP8L A-kinase anchoring protein 8 like IEA Ensembl GO_REF:0000107 NCBI chr 2:62,184,735...62,241,631
Ensembl chr 2:62,155,437...62,221,936
JBrowse link
G ALKBH5 alkB homolog 5, RNA demethylase IEA UniProt GO_REF:0000044 NCBI chr12:60,507,662...60,530,239
Ensembl chr12:60,507,662...60,529,534
JBrowse link
G ALYREF Aly/REF export factor IEA Ensembl GO_REF:0000107 NCBI chr12:1,099,239...1,103,058
Ensembl chr12:1,091,976...1,103,054
JBrowse link
G AP5Z1 adaptor related protein complex 5 subunit zeta 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:3,622,684...3,642,370
Ensembl chr 3:3,622,696...3,642,415
JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:78,451,845...78,454,938
Ensembl chr 7:78,451,851...78,454,938
JBrowse link
G API5 apoptosis inhibitor 5 IEA Ensembl GO_REF:0000107 NCBI chr 2:18,962,262...18,994,235
Ensembl chr 2:18,941,963...18,994,226
JBrowse link
G AR androgen receptor IEA Ensembl GO_REF:0000107 NCBI chr  X:53,609,113...53,806,778
Ensembl chr  X:53,609,176...53,805,578
JBrowse link
G ARHGAP18 Rho GTPase activating protein 18 IEA Ensembl GO_REF:0000107 NCBI chr 1:33,527,734...33,717,980
Ensembl chr 1:33,527,734...33,717,977
JBrowse link
G ARL6IP4 ADP ribosylation factor like GTPase 6 interacting protein 4 IEA UniProt GO_REF:0000044 NCBI chr14:29,886,043...29,888,512
Ensembl chr14:29,886,042...29,894,847
JBrowse link
G ATP6V0A1 ATPase H+ transporting V0 subunit a1 IEA Ensembl GO_REF:0000107 NCBI chr12:20,288,409...20,344,142
Ensembl chr12:20,288,409...20,344,128
JBrowse link
G ATPAF2 ATP synthase mitochondrial F1 complex assembly factor 2 IEA Ensembl GO_REF:0000107 NCBI chr12:60,617,642...60,633,210
Ensembl chr12:60,617,648...60,633,272
JBrowse link
G ATXN2L ataxin 2 like IEA Ensembl GO_REF:0000107 NCBI chr 3:18,506,082...18,519,060
Ensembl chr 3:18,506,052...18,519,060
JBrowse link
G BARD1 BRCA1 associated RING domain 1 IEA Ensembl GO_REF:0000107 NCBI chr15:117,049,483...117,135,889
Ensembl chr15:117,047,839...117,175,851
JBrowse link
G BASP1 brain abundant membrane attached signal protein 1 IEA Ensembl GO_REF:0000107 NCBI chr16:6,384,322...6,440,507 JBrowse link
G BAZ2A bromodomain adjacent to zinc finger domain 2A IEA Ensembl GO_REF:0000107 NCBI chr 5:21,932,527...21,983,033
Ensembl chr 5:21,933,894...21,983,021
JBrowse link
G BCAS2 BCAS2 pre-mRNA processing factor ISO HPA GO_REF:0000052 NCBI chr 4:105,992,558...106,003,160 JBrowse link
G BCLAF1 BCL2 associated transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:27,872,167...27,902,980
Ensembl chr 1:27,872,184...27,919,899
JBrowse link
G BDNF brain derived neurotrophic factor IEA Ensembl GO_REF:0000107 NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,623,268...32,679,164
JBrowse link
G BMP2K BMP2 inducible kinase IEA Ensembl GO_REF:0000107 NCBI chr 8:138,671,240...138,789,966
Ensembl chr 8:138,675,326...138,790,126
JBrowse link
G BNIP3L BCL2 interacting protein 3 like IEA Ensembl GO_REF:0000107 NCBI chr14:10,318,688...10,345,689
Ensembl chr14:10,318,714...10,345,683
JBrowse link
G BRD1 bromodomain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:774,307...808,016
Ensembl chr 5:770,654...808,006
JBrowse link
G BRD2 bromodomain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr 7:25,096,579...25,162,591
Ensembl chr 7:25,150,658...25,165,433
JBrowse link
G C5H12orf57 chromosome 5 C12orf57 homolog IEA Ensembl GO_REF:0000107 NCBI chr 5:63,779,510...63,781,307
Ensembl chr 5:63,779,511...63,781,308
JBrowse link
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 ISO RGD PMID:28587927 RGD:13515054 NCBI chr15:402,801...455,691
Ensembl chr15:186,315...459,856
JBrowse link
G CACTIN cactin, spliceosome C complex subunit IEA Ensembl GO_REF:0000107 NCBI chr 2:75,049,250...75,065,990
Ensembl chr 2:75,049,261...75,065,300
JBrowse link
G CARMIL1 capping protein regulator and myosin 1 linker 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:20,036,430...20,353,431
Ensembl chr 7:20,036,739...20,353,431
JBrowse link
G CASC3 CASC3 exon junction complex subunit IEA UniProt GO_REF:0000044 NCBI chr12:22,199,227...22,221,573
Ensembl chr12:22,199,233...22,222,270
JBrowse link
G CBLL1 Cbl proto-oncogene like 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:107,456,261...107,474,615
Ensembl chr 9:107,455,186...107,474,611
JBrowse link
G CCNB3 cyclin B3 ISO HPA GO_REF:0000052 NCBI chr  X:43,922,729...43,988,939 JBrowse link
G CCNL1 cyclin L1 IEA UniProt GO_REF:0000044 NCBI chr13:96,984,542...97,004,401
Ensembl chr13:96,954,025...97,002,546
JBrowse link
G CD2BP2 CD2 cytoplasmic tail binding protein 2 colocalizes_with IEA
ISO
(PMID:15840814) Ensembl
BHF-UCL
PMID:15840814 GO_REF:0000107 NCBI chr 3:17,957,697...17,961,804
Ensembl chr 3:17,955,255...17,962,948
JBrowse link
G CDC25C cell division cycle 25C IEA Ensembl GO_REF:0000107 NCBI chr 2:140,289,156...140,323,696
Ensembl chr 2:140,263,301...140,324,425
JBrowse link
G CDC34 cell division cycle 34, ubiqiutin conjugating enzyme IEA Ensembl GO_REF:0000107 NCBI chr 2:77,761,587...77,768,332
Ensembl chr 2:77,761,590...77,768,396
JBrowse link
G CDC40 cell division cycle 40 IEA Ensembl GO_REF:0000107 NCBI chr 1:76,179,169...76,234,690
Ensembl chr 1:76,179,164...76,232,959
JBrowse link
G CDC5L cell division cycle 5 like IEA Ensembl GO_REF:0000107 NCBI chr 7:39,384,397...39,427,729
Ensembl chr 7:39,384,556...39,431,248
JBrowse link
G CDK12 cyclin dependent kinase 12 IEA Ensembl GO_REF:0000107 NCBI chr12:22,755,365...22,831,397
Ensembl chr12:22,755,909...22,831,333
JBrowse link
G CDK13 cyclin dependent kinase 13 IEA Ensembl GO_REF:0000107 NCBI chr18:54,310,311...54,430,060
Ensembl chr18:54,308,144...54,429,939
JBrowse link
G CDYL chromodomain Y like IEA Ensembl GO_REF:0000107 NCBI chr 7:2,845,903...2,967,537
Ensembl chr 7:2,785,405...2,966,241
JBrowse link
G CHD5 chromodomain helicase DNA binding protein 5 IEA Ensembl GO_REF:0000107 NCBI chr 6:67,017,410...67,086,685
Ensembl chr 6:67,017,425...67,087,043
JBrowse link
G CHTOP chromatin target of PRMT1 IEA Ensembl GO_REF:0000107 NCBI chr 4:95,996,030...96,006,511
Ensembl chr 4:95,994,263...96,005,584
JBrowse link
G CIR1 corepressor interacting with RBPJ, CIR1 IEA Ensembl GO_REF:0000107 NCBI chr15:80,338,317...80,375,708
Ensembl chr15:80,338,318...80,375,708
JBrowse link
G CKAP4 cytoskeleton associated protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 5:14,021,131...14,031,196
Ensembl chr 5:14,021,113...14,030,039
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 IEA Ensembl GO_REF:0000107 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G COPS4 COP9 signalosome subunit 4 ISO HPA GO_REF:0000052 NCBI chr 8:135,280,475...135,314,393
Ensembl chr 8:135,280,502...135,314,460
JBrowse link
G CPSF6 cleavage and polyadenylation specific factor 6 IEA Ensembl GO_REF:0000107 NCBI chr 5:33,525,668...33,559,941
Ensembl chr 5:33,525,684...33,618,945
JBrowse link
G CRY2 cryptochrome circadian regulator 2 ISO HPA GO_REF:0000052 NCBI chr 2:16,587,101...16,620,380
Ensembl chr 2:16,585,966...16,620,405
JBrowse link
G CSNK1A1 casein kinase 1 alpha 1 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 2:150,612,845...150,662,431
Ensembl chr 2:150,612,844...150,662,351
JBrowse link
G CWC15 CWC15 spliceosome associated protein homolog IEA Ensembl GO_REF:0000107 NCBI chr 9:27,035,501...27,047,280
Ensembl chr 9:27,035,504...27,047,225
JBrowse link
G CWC22 CWC22 spliceosome associated protein homolog IEA Ensembl GO_REF:0000107 NCBI chr15:85,541,158...85,605,837
Ensembl chr15:85,542,004...85,605,614
JBrowse link
G CWC25 CWC25 spliceosome associated protein homolog IEA Ensembl GO_REF:0000107 NCBI chr12:23,298,050...23,315,445
Ensembl chr12:23,298,065...23,316,238
JBrowse link
G CXXC1 CXXC finger protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:99,934,493...99,940,125
Ensembl chr 1:99,934,497...99,940,130
JBrowse link
G DAZAP2 DAZ associated protein 2 ISO HPA GO_REF:0000052
G DDX17 DEAD-box helicase 17 ISO HPA GO_REF:0000052 NCBI chr 5:9,485,792...9,505,157
Ensembl chr 5:9,485,702...9,505,157
JBrowse link
G DDX39A DExD-box helicase 39A IEA Ensembl GO_REF:0000107 NCBI chr 2:64,836,040...64,844,996
Ensembl chr 2:64,836,062...64,844,994
JBrowse link
G DDX39B DExD-box helicase 39B IEA Ensembl
UniProt
GO_REF:0000044, GO_REF:0000107 NCBI chr 7:23,658,089...23,669,095
Ensembl chr 7:23,658,086...23,673,083
JBrowse link
G DDX42 DEAD-box helicase 42 IEA Ensembl GO_REF:0000107 NCBI chr12:15,114,199...15,165,257
Ensembl chr12:15,114,280...15,165,177
JBrowse link
G DDX46 DEAD-box helicase 46 ISO HPA GO_REF:0000052 NCBI chr 2:136,972,504...137,030,186
Ensembl chr 2:136,972,507...137,030,430
JBrowse link
G DENND1B DENN domain containing 1B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:20,391,507...20,635,808
Ensembl chr10:20,395,462...20,636,247
JBrowse link
G DGKQ diacylglycerol kinase theta IEA Ensembl GO_REF:0000107 NCBI chr 8:313,325...325,089
Ensembl chr 8:313,327...325,095
JBrowse link
G DGKZ diacylglycerol kinase zeta IEA Ensembl GO_REF:0000107 NCBI chr 2:16,134,046...16,176,043
Ensembl chr 2:16,134,046...16,176,239
JBrowse link
G DHX15 DEAH-box helicase 15 IEA Ensembl GO_REF:0000107 NCBI chr 8:18,563,808...18,620,892
Ensembl chr 8:18,537,868...18,620,883
JBrowse link
G DHX36 DEAH-box helicase 36 IEA Ensembl GO_REF:0000107 NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,790...94,350,312
JBrowse link
G DNAAF1 dynein axonemal assembly factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:4,457,283...4,483,641
Ensembl chr 6:4,457,291...4,479,828
JBrowse link
G DOCK1 dedicator of cytokinesis 1 ISO HPA GO_REF:0000052 NCBI chr14:136,199,747...136,745,488
Ensembl chr14:136,257,807...136,741,882
JBrowse link
G DUSP10 dual specificity phosphatase 10 IEA Ensembl GO_REF:0000107 NCBI chr10:10,866,446...10,905,852
Ensembl chr10:10,866,448...10,905,857
JBrowse link
G DUSP11 dual specificity phosphatase 11 IEA Ensembl GO_REF:0000107 NCBI chr 3:69,206,172...69,226,004
Ensembl chr 3:69,201,239...69,226,321
JBrowse link
G DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A ISO PMID:22767602
PMID:9748265
UniProt PMID:9748265, PMID:22767602 RGD:8554210, RGD:8554265 NCBI chr13:201,008,506...201,159,946
Ensembl chr13:201,008,830...201,159,954
JBrowse link
G DYRK3 dual specificity tyrosine phosphorylation regulated kinase 3 IEA Ensembl GO_REF:0000107 NCBI chr 9:67,268,600...67,279,617
Ensembl chr 9:67,268,633...67,280,113
JBrowse link
G E2F7 E2F transcription factor 7 IEA Ensembl GO_REF:0000107 NCBI chr 5:104,126,924...104,163,582
Ensembl chr 5:104,126,952...104,163,216
JBrowse link
G EFTUD2 elongation factor Tu GTP binding domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr12:18,474,367...18,514,993
Ensembl chr12:18,474,096...18,517,479
JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 IEA Ensembl GO_REF:0000107 NCBI chr 7:23,977,683...23,992,673
Ensembl chr 7:23,977,683...23,993,478
JBrowse link
G ELL elongation factor for RNA polymerase II IEA Ensembl GO_REF:0000107 NCBI chr 2:59,277,164...59,359,986
Ensembl chr 2:59,277,171...59,360,246
JBrowse link
G EP400 E1A binding protein p400 IEA Ensembl GO_REF:0000107 NCBI chr14:23,286,938...23,396,316
Ensembl chr14:23,289,244...23,396,457
JBrowse link
G EPAS1 endothelial PAS domain protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:94,167,759...94,253,662
Ensembl chr 3:94,165,815...94,254,079
JBrowse link
G EPOR erythropoietin receptor IEA Ensembl GO_REF:0000107 NCBI chr 2:70,063,601...70,068,821
Ensembl chr 2:70,063,515...70,068,821
JBrowse link
G ERBIN erbb2 interacting protein IEA Ensembl GO_REF:0000107 NCBI chr16:44,415,106...44,533,353
Ensembl chr16:44,225,734...44,533,351
JBrowse link
G ESX1 ESX homeobox 1 ISO HPA GO_REF:0000052 NCBI chr  X:84,995,241...85,007,557 JBrowse link
G FAM107A family with sequence similarity 107 member A ISO HPA GO_REF:0000052 NCBI chr13:40,276,896...40,369,708 JBrowse link
G FAM193B family with sequence similarity 193 member B IEA Ensembl GO_REF:0000107 NCBI chr 2:80,396,371...80,430,074
Ensembl chr 2:80,396,362...80,430,071
JBrowse link
G FAM76B family with sequence similarity 76 member B IEA Ensembl GO_REF:0000107 NCBI chr 9:27,790,139...27,813,418
Ensembl chr 9:27,790,139...27,812,222
JBrowse link
G FASTK Fas activated serine/threonine kinase ISO (MGI:MGI:5447610|PMID:17592127) UniProtKB PMID:17592127 MGI:MGI:5447610 NCBI chr18:6,145,189...6,149,367
Ensembl chr18:6,145,184...6,153,023
JBrowse link
G FBXL4 F-box and leucine rich repeat protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 1:65,872,119...65,936,442
Ensembl chr 1:65,872,119...65,935,703
JBrowse link
G FEV FEV transcription factor, ETS family member IEA Ensembl GO_REF:0000107 NCBI chr15:121,005,279...121,008,748
Ensembl chr15:121,005,279...121,008,748
JBrowse link
G FIBP FGF1 intracellular binding protein IEA Ensembl GO_REF:0000107 NCBI chr 2:6,440,483...6,445,927
Ensembl chr 2:6,440,390...6,445,927
JBrowse link
G FNBP4 formin binding protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 2:14,895,533...14,932,187
Ensembl chr 2:14,896,175...14,932,185
JBrowse link
G FNDC1 fibronectin type III domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:8,007,320...8,106,875
Ensembl chr 1:8,007,001...8,081,817
JBrowse link
G FOXO4 forkhead box O4 IEA Ensembl GO_REF:0000107 NCBI chr  X:57,132,549...57,140,377
Ensembl chr  X:57,132,548...57,140,650
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase IEA UniProt GO_REF:0000044 NCBI chr 6:31,177,112...31,564,674
Ensembl chr 6:31,174,569...31,564,707
JBrowse link
G FYTTD1 forty-two-three domain containing 1 IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000044 NCBI chr13:134,363,646...134,402,632
Ensembl chr13:134,363,682...134,438,321
JBrowse link
G GADD45A growth arrest and DNA damage inducible alpha IEA Ensembl GO_REF:0000107 NCBI chr 6:144,940,702...144,944,089
Ensembl chr 6:144,940,702...144,944,249
JBrowse link
G GCAT glycine C-acetyltransferase IEA Ensembl GO_REF:0000107 NCBI chr 5:10,027,133...10,038,494
Ensembl chr 5:10,011,009...10,038,433
JBrowse link
G GLI2 GLI family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr15:30,312,528...30,580,272
Ensembl chr15:30,313,817...30,579,306
JBrowse link
G GLI3 GLI family zinc finger 3 IEA Ensembl GO_REF:0000107 NCBI chr18:52,403,463...52,697,906
Ensembl chr18:52,404,071...52,697,903
JBrowse link
G GLIS2 GLIS family zinc finger 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:37,998,072...38,018,726
Ensembl chr 3:37,998,068...38,009,024
JBrowse link
G GPATCH2 G-patch domain containing 2 IEA Ensembl GO_REF:0000107 NCBI chr10:7,615,121...7,797,227
Ensembl chr10:7,615,592...7,797,191
JBrowse link
G GRK5 G protein-coupled receptor kinase 5 IEA Ensembl GO_REF:0000107 NCBI chr14:129,113,933...129,351,135
Ensembl chr14:129,113,602...129,347,153
JBrowse link
G GTF2E2 general transcription factor IIE subunit 2 IEA Ensembl GO_REF:0000107 NCBI chr15:54,444,480...54,525,566
Ensembl chr15:54,444,470...54,531,213
JBrowse link
G GTF2H2 general transcription factor IIH subunit 2 ISO HPA GO_REF:0000052 NCBI chr16:47,658,015...47,700,926 JBrowse link
G GTF2H4 general transcription factor IIH subunit 4 ISO HPA GO_REF:0000052 NCBI chr 7:23,398,414...23,404,268 JBrowse link
G HABP4 hyaluronan binding protein 4 IEA Ensembl GO_REF:0000107 NCBI chr10:25,599,413...25,636,000
Ensembl chr10:25,598,175...25,636,048
JBrowse link
G HAUS6 HAUS augmin like complex subunit 6 IEA Ensembl GO_REF:0000107 NCBI chr 1:203,720,253...203,771,222
Ensembl chr 1:203,720,279...203,771,126
JBrowse link
G HBP1 HMG-box transcription factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 9:106,966,060...106,993,915
Ensembl chr 9:106,965,947...106,996,048
JBrowse link
G HDAC4 histone deacetylase 4 IEA Ensembl GO_REF:0000107 NCBI chr15:138,378,237...138,657,266
Ensembl chr15:138,381,627...138,614,301
JBrowse link
G HDAC5 histone deacetylase 5 IEA Ensembl GO_REF:0000107 NCBI chr12:19,077,910...19,119,463
Ensembl chr12:19,077,997...19,123,140
JBrowse link
G HEXIM2 HEXIM P-TEFb complex subunit 2 IEA Ensembl GO_REF:0000107 NCBI chr12:18,251,424...18,263,032
Ensembl chr12:18,251,424...18,258,295
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,181...190,674,850
JBrowse link
G HIF3A hypoxia inducible factor 3 subunit alpha ISO (MGI:MGI:5526927|PMID:21546903) UniProtKB PMID:21546903 MGI:MGI:5526927 NCBI chr 6:52,342,893...52,376,339
Ensembl chr 6:52,342,909...52,376,339
JBrowse link
G HIKESHI heat shock protein nuclear import factor hikeshi IEA Ensembl GO_REF:0000107 NCBI chr 9:20,181,187...20,224,116
Ensembl chr 9:20,181,235...20,280,211
JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 4:106,570,950...106,627,114
Ensembl chr 4:106,572,724...106,627,152
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,475,270...17,497,130
JBrowse link
G HOXA6 homeobox A6 ISO HPA GO_REF:0000052 NCBI chr18:45,423,530...45,429,947 JBrowse link
G HOXB2 homeobox B2 IEA Ensembl GO_REF:0000107 NCBI chr12:24,796,786...24,800,499
Ensembl chr12:24,796,533...24,799,536
JBrowse link
G HP1BP3 heterochromatin protein 1 binding protein 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:78,975,551...79,007,921
Ensembl chr 6:78,975,550...79,007,214
JBrowse link
G HS6ST1 heparan sulfate 6-O-sulfotransferase 1 IEA Ensembl GO_REF:0000107 NCBI chr15:59,066,448...59,108,780
Ensembl chr15:59,066,603...59,108,777
JBrowse link
G HSPB3 heat shock protein family B (small) member 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:33,716,458...33,717,402
Ensembl chr16:33,716,626...33,719,018
JBrowse link
G IK IK cytokine IEA Ensembl GO_REF:0000107 NCBI chr 2:142,361,134...142,376,335
Ensembl chr 2:142,361,155...142,378,745
JBrowse link
G IL15 interleukin 15 IEA Ensembl GO_REF:0000107 NCBI chr 8:85,666,963...85,740,980
Ensembl chr 8:85,667,307...85,740,911
JBrowse link
G IL16 interleukin 16 IEA Ensembl GO_REF:0000107 NCBI chr 7:49,973,937...50,102,346
Ensembl chr 7:49,974,068...50,102,332
JBrowse link
G INPPL1 inositol polyphosphate phosphatase like 1 IDA
IEA
(PMID:12847108) UniProt PMID:12847108 GO_REF:0000044 NCBI chr 9:6,793,971...6,807,286
Ensembl chr 9:6,792,884...6,808,028
JBrowse link
G ITPKC inositol-trisphosphate 3-kinase C IEA Ensembl GO_REF:0000107 NCBI chr 6:48,943,207...48,962,101
Ensembl chr 6:48,942,974...48,961,438
JBrowse link
G JADE1 jade family PHD finger 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:96,208,217...96,564,132
Ensembl chr 8:96,118,610...96,692,407
JBrowse link
G KAT6A lysine acetyltransferase 6A ISO HPA GO_REF:0000052 NCBI chr17:11,002,818...11,109,974 JBrowse link
G KAZN kazrin, periplakin interacting protein IEA Ensembl GO_REF:0000107 NCBI chr 6:73,297,134...74,402,794
Ensembl chr 6:73,297,158...74,402,790
JBrowse link
G KIF22 kinesin family member 22 IEA Ensembl GO_REF:0000107 NCBI chr 3:18,023,104...18,041,732
Ensembl chr 3:18,023,093...18,041,887
JBrowse link
G LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase IEA Ensembl GO_REF:0000107 NCBI chr14:133,864,045...133,999,174
Ensembl chr14:133,864,048...133,999,174
JBrowse link
G LIMK1 LIM domain kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:11,252,820...11,279,286
Ensembl chr 3:11,252,645...11,279,285
JBrowse link
G LOC100522201 histone H2AX IEA Ensembl GO_REF:0000107 NCBI chr 9:46,308,824...46,310,494
Ensembl chr 9:46,309,653...46,310,084
JBrowse link
G LOC100523672 heat shock factor protein 4 IEA Ensembl GO_REF:0000107 NCBI chr 6:27,808,658...27,818,256
Ensembl chr 6:27,808,652...27,813,404
Ensembl chr 6:27,808,652...27,813,404
JBrowse link
G LOC102162486 putative RNA-binding protein Luc7-like 2 IEA Ensembl GO_REF:0000107 NCBI chr18:10,268,077...10,333,227
Ensembl chr18:10,267,310...10,334,954
JBrowse link
G LOC106504154 sex-determining region Y protein IEA UniProt GO_REF:0000044 NCBI chr  Y:40,553,946...40,555,093 JBrowse link
G LPXN leupaxin IEA Ensembl GO_REF:0000107 NCBI chr 2:12,534,780...12,582,756
Ensembl chr 2:12,534,840...12,582,745
JBrowse link
G LUC7L3 LUC7 like 3 pre-mRNA splicing factor IEA Ensembl GO_REF:0000107 NCBI chr12:27,004,894...27,032,156
Ensembl chr12:26,994,877...27,035,233
JBrowse link
G MAML1 mastermind like transcriptional coactivator 1 IEA InterPro GO_REF:0000002 NCBI chr 2:78,818,658...78,876,633
Ensembl chr 2:78,818,411...78,876,615
JBrowse link
G MAML2 mastermind like transcriptional coactivator 2 IEA InterPro GO_REF:0000002 NCBI chr 9:27,993,319...28,372,982
Ensembl chr 9:27,997,887...28,371,198
JBrowse link
G MAML3 mastermind like transcriptional coactivator 3 IEA Ensembl GO_REF:0000107 NCBI chr 8:86,879,353...87,323,123
Ensembl chr 8:86,880,173...87,322,847
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 IEA Ensembl GO_REF:0000107 NCBI chr 7:31,791,398...31,861,544
Ensembl chr 7:31,790,104...31,862,038
JBrowse link
G MAPT microtubule associated protein tau IEA Ensembl GO_REF:0000107 NCBI chr12:17,098,259...17,211,483
Ensembl chr12:17,095,587...17,211,368
JBrowse link
G MBD1 methyl-CpG binding domain protein 1 ISO (MGI:MGI:5447620|PMID:15777793) UniProtKB PMID:15777793 MGI:MGI:5447620 NCBI chr 1:99,848,193...99,917,347
Ensembl chr 1:99,848,184...99,917,328
JBrowse link
G MBD4 methyl-CpG binding domain 4, DNA glycosylase IEA Ensembl GO_REF:0000107 NCBI chr13:68,816,677...68,828,559
Ensembl chr13:68,814,823...68,828,580
JBrowse link
G MECOM MDS1 and EVI1 complex locus IEA Ensembl GO_REF:0000107 NCBI chr13:107,753,207...108,336,136
Ensembl chr13:107,754,480...108,335,503
JBrowse link
G MEF2C myocyte enhancer factor 2C ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,122,407...96,296,842
JBrowse link
G METTL3 methyltransferase like 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,948
JBrowse link
G MOCS2 molybdenum cofactor synthesis 2 IEA Ensembl GO_REF:0000107 NCBI chr16:32,427,783...32,462,362
Ensembl chr16:32,424,645...32,462,521
JBrowse link
G MORF4L1 mortality factor 4 like 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:48,050,050...48,075,799
Ensembl chr 7:48,050,045...48,075,796
JBrowse link
G MSL1 MSL complex subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr12:22,224,611...22,237,557
Ensembl chr12:22,224,605...22,237,587
JBrowse link
G MSX2 msh homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr16:49,765,587...49,771,745
Ensembl chr16:49,766,897...49,771,634
JBrowse link
G NAMPT nicotinamide phosphoribosyltransferase IEA Ensembl GO_REF:0000107 NCBI chr 9:106,119,896...106,162,126
Ensembl chr 9:106,119,899...106,294,587
JBrowse link
G NCAPG2 non-SMC condensin II complex subunit G2 IEA Ensembl GO_REF:0000107 NCBI chr18:653,182...713,825
Ensembl chr18:653,224...717,205
JBrowse link
G NCBP3 nuclear cap binding subunit 3 IEA Ensembl GO_REF:0000107 NCBI chr12:49,882,076...49,918,759
Ensembl chr12:49,882,084...49,918,744
JBrowse link
G NDUFB1 NADH:ubiquinone oxidoreductase subunit B1 ISO HPA GO_REF:0000052 NCBI chr 7:113,652,772...113,659,937 JBrowse link
G NEK6 NIMA related kinase 6 IEA UniProt GO_REF:0000044 NCBI chr 1:265,078,407...265,170,960
Ensembl chr 1:265,077,588...265,176,903
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 IEA Ensembl GO_REF:0000107 NCBI chr 7:74,918,982...74,929,688
Ensembl chr 7:74,918,982...74,931,348
JBrowse link
G NFKBIZ NFKB inhibitor zeta IEA Ensembl GO_REF:0000107 NCBI chr13:157,261,419...157,273,119
Ensembl chr13:157,261,418...157,294,478
JBrowse link
G NOC3L NOC3 like DNA replication regulator IEA Ensembl GO_REF:0000107 NCBI chr14:105,766,299...105,806,368
Ensembl chr14:105,748,710...105,806,271
JBrowse link
G NONO non-POU domain containing octamer binding IEA UniProt GO_REF:0000044 Ensembl chr  X:57,278,915...57,319,588 JBrowse link
G NPM1 nucleophosmin 1 ISO (MGI:MGI:3615094|PMID:16376875) MGI PMID:16376875 MGI:MGI:3615094 NCBI chr16:52,767,263...52,781,862
Ensembl chr16:52,765,296...52,781,740
JBrowse link
G NR0B1 nuclear receptor subfamily 0 group B member 1 IEA Ensembl GO_REF:0000107 NCBI chr  X:26,117,874...26,122,951
Ensembl chr  X:26,117,868...26,122,995
JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 2:144,822,937...144,956,451
Ensembl chr 2:144,822,937...144,956,095
JBrowse link
G NR4A2 nuclear receptor subfamily 4 group A member 2 IEA Ensembl GO_REF:0000107 NCBI chr15:63,487,051...63,506,249
Ensembl chr15:63,487,698...63,505,244
JBrowse link
G NRDE2 NRDE-2, necessary for RNA interference, domain containing IEA Ensembl GO_REF:0000107 NCBI chr 7:112,039,949...112,090,632
Ensembl chr 7:112,038,234...112,090,511
JBrowse link
G NRIP1 nuclear receptor interacting protein 1 IEA Ensembl GO_REF:0000107 NCBI chr13:179,822,731...179,916,226
Ensembl chr13:179,824,862...179,915,177
JBrowse link
G NSL1 NSL1 component of MIS12 kinetochore complex IEA Ensembl GO_REF:0000107 NCBI chr 9:130,599,901...130,668,935
Ensembl chr 9:130,622,331...130,668,936
JBrowse link
G NSRP1 nuclear speckle splicing regulatory protein 1 IEA Ensembl GO_REF:0000107 NCBI chr12:46,211,202...46,271,509
Ensembl chr12:46,206,694...46,273,053
JBrowse link
G NXF1 nuclear RNA export factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:8,968,659...8,983,276
Ensembl chr 2:8,937,776...8,981,985
Ensembl chr 2:8,937,776...8,981,985
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase ISO (PMID:17148573) UniProtKB PMID:17148573 NCBI chr13:66,038,669...66,045,478 JBrowse link
G OIP5 Opa interacting protein 5 IEA Ensembl GO_REF:0000107 NCBI chr 1:130,036,478...130,054,058
Ensembl chr 1:130,036,480...130,047,043
JBrowse link
G OSGEP O-sialoglycoprotein endopeptidase IEA Ensembl GO_REF:0000107 NCBI chr 7:78,454,667...78,462,260
Ensembl chr 7:78,454,666...78,462,260
JBrowse link
G PACSIN2 protein kinase C and casein kinase substrate in neurons 2 IEA Ensembl GO_REF:0000107 NCBI chr 5:5,853,377...5,985,174
Ensembl chr 5:5,853,377...5,985,171
JBrowse link
G PARN poly(A)-specific ribonuclease IEA Ensembl GO_REF:0000107 NCBI chr 3:28,616,808...28,802,506
Ensembl chr 3:28,612,269...28,802,505
JBrowse link
G PCBP1 poly(rC) binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 3:72,378,643...72,380,364
Ensembl chr 3:72,378,648...72,380,362
JBrowse link
G PDX1 pancreatic and duodenal homeobox 1 IEA Ensembl GO_REF:0000107 NCBI chr11:5,303,609...5,309,063
Ensembl chr11:5,303,639...5,310,843
JBrowse link
G PHF5A PHD finger protein 5A IEA Ensembl GO_REF:0000107 NCBI chr 5:7,071,145...7,080,046
Ensembl chr 5:7,071,271...7,082,696
JBrowse link
G PHF7 PHD finger protein 7 IEA Ensembl GO_REF:0000107 NCBI chr13:34,553,818...34,565,647
Ensembl chr13:34,553,816...34,565,646
JBrowse link
G PIP5K1A phosphatidylinositol-4-phosphate 5-kinase type 1 alpha IEA Ensembl GO_REF:0000107 NCBI chr 4:98,012,941...98,062,166
Ensembl chr 4:98,012,944...98,056,815
JBrowse link
G PLAG1 PLAG1 zinc finger IEA Ensembl GO_REF:0000107 NCBI chr 4:75,646,585...75,696,718
Ensembl chr 4:75,646,592...75,694,365
JBrowse link
G PLCB1 phospholipase C beta 1 IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr17:17,007,197...17,745,314
Ensembl chr17:17,007,261...17,745,312
JBrowse link
G PLRG1 pleiotropic regulator 1 ISO HPA GO_REF:0000052 NCBI chr 8:74,614,925...74,631,072
Ensembl chr 8:74,614,891...74,633,101
JBrowse link
G PNISR PNN interacting serine and arginine rich protein IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:66,349,065...66,382,205
Ensembl chr 1:66,321,459...66,381,451
JBrowse link
G PNN pinin, desmosome associated protein IEA UniProt GO_REF:0000044 NCBI chr 1:169,725,649...169,734,003
Ensembl chr 1:169,725,287...169,756,235
JBrowse link
G POLDIP3 DNA polymerase delta interacting protein 3 IEA Ensembl GO_REF:0000107 NCBI chr 5:6,174,442...6,201,941
Ensembl chr 5:6,169,398...6,201,940
JBrowse link
G POLI DNA polymerase iota IEA Ensembl GO_REF:0000107 NCBI chr 1:103,793,779...103,820,365
Ensembl chr 1:103,794,071...103,824,646
JBrowse link
G POLR2D RNA polymerase II subunit D IEA Ensembl GO_REF:0000107 NCBI chr15:59,479,631...59,495,975
Ensembl chr15:59,479,538...59,498,178
JBrowse link
G POLR3D RNA polymerase III subunit D IEA Ensembl GO_REF:0000107 NCBI chr14:6,520,962...6,529,526
Ensembl chr14:6,521,035...6,532,182
JBrowse link
G POMP proteasome maturation protein ISO HPA GO_REF:0000052 NCBI chr11:5,953,691...5,968,447
Ensembl chr11:5,953,743...5,975,260
JBrowse link
G POU4F2 POU class 4 homeobox 2 IEA Ensembl GO_REF:0000107 NCBI chr 8:82,044,443...82,046,377
Ensembl chr 8:82,044,644...82,046,307
JBrowse link
G PPIE peptidylprolyl isomerase E ISO HPA GO_REF:0000052 NCBI chr 6:95,548,582...95,566,470 JBrowse link
G PPIG peptidylprolyl isomerase G IEA Ensembl GO_REF:0000107 NCBI chr15:75,940,397...75,979,168
Ensembl chr15:75,940,435...75,979,165
JBrowse link
G PPIH peptidylprolyl isomerase H IEA Ensembl GO_REF:0000107 NCBI chr 6:168,741,999...168,760,350
Ensembl chr 6:168,742,005...168,760,289
JBrowse link
G PPP1R16B protein phosphatase 1 regulatory subunit 16B IEA Ensembl GO_REF:0000107 NCBI chr17:41,753,697...41,866,671
Ensembl chr17:41,752,845...41,866,375
JBrowse link
G PPP1R8 protein phosphatase 1 regulatory subunit 8 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:84,966,746...84,990,664
Ensembl chr 6:84,966,746...84,990,663
JBrowse link
G PPP4R3A protein phosphatase 4 regulatory subunit 3A IEA Ensembl GO_REF:0000107 NCBI chr 7:113,111,305...113,148,988
Ensembl chr 7:113,111,300...113,148,954
JBrowse link
G PPP4R3B protein phosphatase 4 regulatory subunit 3B IEA Ensembl GO_REF:0000107 NCBI chr 3:85,650,064...85,708,808
Ensembl chr 3:85,650,068...85,726,283
JBrowse link
G PQBP1 polyglutamine binding protein 1 IEA UniProt GO_REF:0000044 NCBI chr  X:42,976,086...42,981,732
Ensembl chr  X:42,975,410...42,981,725
JBrowse link
G PRCC proline rich mitotic checkpoint control factor IEA Ensembl GO_REF:0000107 NCBI chr 4:93,297,859...93,325,499
Ensembl chr 4:93,286,541...93,325,232
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 IEA Ensembl GO_REF:0000107 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,321...25,783,610
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:155,683,392...155,754,283
Ensembl chr 6:155,681,781...155,754,272
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha IEA Ensembl GO_REF:0000107 NCBI chr 2:65,074,876...65,095,564
Ensembl chr 2:65,074,870...65,095,553
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase IEA Ensembl GO_REF:0000107 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G PRPF18 pre-mRNA processing factor 18 IEA UniProt GO_REF:0000044 NCBI chr10:48,062,229...48,122,222 JBrowse link
G PRPF19 pre-mRNA processing factor 19 IEA Ensembl GO_REF:0000107 NCBI chr 2:10,851,779...10,860,315
Ensembl chr 2:10,851,579...10,860,838
JBrowse link
G PRPF3 pre-mRNA processing factor 3 IEA Ensembl GO_REF:0000107 NCBI chr 4:98,745,263...98,771,724
Ensembl chr 4:98,745,266...98,771,667
JBrowse link
G PRPF31 pre-mRNA processing factor 31 IEA Ensembl GO_REF:0000107 NCBI chr 6:55,995,087...56,011,507
Ensembl chr 6:55,995,089...56,011,430
JBrowse link
G PRPF4 pre-mRNA processing factor 4 IEA UniProt GO_REF:0000044 NCBI chr 1:253,906,258...253,925,683
Ensembl chr 1:253,906,717...253,925,049
JBrowse link
G PRPF40A pre-mRNA processing factor 40 homolog A ISO HPA GO_REF:0000052 NCBI chr15:60,388,582...60,440,478
Ensembl chr15:60,386,596...60,440,523
JBrowse link
G PRPF4B pre-mRNA processing factor 4B IEA Ensembl GO_REF:0000107 NCBI chr 7:2,382,498...2,417,085
Ensembl chr 7:2,360,481...2,415,386
JBrowse link
G PRPF6 pre-mRNA processing factor 6 IEA Ensembl GO_REF:0000107 NCBI chr17:62,815,509...62,857,795
Ensembl chr17:62,815,284...62,861,865
JBrowse link
G PSPC1 paraspeckle component 1 IEA UniProt GO_REF:0000044 NCBI chr11:477,010...572,090
Ensembl chr11:482,559...572,090
JBrowse link
G RAD54L2 RAD54 like 2 ISO (MGI:MGI:3716017|PMID:12058073) MGI PMID:12058073 MGI:MGI:3716017 NCBI chr13:33,771,783...33,890,567
Ensembl chr13:33,771,814...33,885,848
JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase IEA Ensembl GO_REF:0000107 NCBI chr13:68,581,128...68,657,911
Ensembl chr13:68,580,812...68,657,829
JBrowse link
G RBBP6 RB binding protein 6, ubiquitin ligase IEA Ensembl GO_REF:0000107
G RBM10 RNA binding motif protein 10 IEA Ensembl GO_REF:0000107 NCBI chr  X:41,773,232...41,803,656
Ensembl chr  X:41,773,232...41,803,662
JBrowse link
G RBM11 RNA binding motif protein 11 IEA Ensembl GO_REF:0000107 NCBI chr13:179,180,611...179,191,934
Ensembl chr13:179,180,466...179,191,924
JBrowse link
G RBM14 RNA binding motif protein 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:5,791,445...5,800,784
Ensembl chr 2:5,759,062...5,800,832
JBrowse link
G RBM15 RNA binding motif protein 15 IEA Ensembl GO_REF:0000107 NCBI chr 4:109,767,464...109,791,555
Ensembl chr 4:109,769,869...109,786,235
JBrowse link
G RBM15B RNA binding motif protein 15B IEA Ensembl GO_REF:0000107 NCBI chr13:33,664,387...33,671,047
Ensembl chr13:33,664,472...33,669,456
JBrowse link
G RBM19 RNA binding motif protein 19 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:38,082,042...38,202,548
Ensembl chr14:38,082,077...38,204,754
JBrowse link
G RBM25 RNA binding motif protein 25 IEA Ensembl GO_REF:0000107 NCBI chr 7:96,406,650...96,468,172
Ensembl chr 7:96,406,646...96,471,349
JBrowse link
G RBM39 RNA binding motif protein 39 IEA Ensembl GO_REF:0000107 NCBI chr17:39,032,141...39,064,803
Ensembl chr17:39,031,955...39,064,785
JBrowse link
G RBM4 RNA binding motif protein 4 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:5,776,535...5,784,337
Ensembl chr 2:5,759,062...5,800,832
JBrowse link
G RBM4B RNA binding motif protein 4B IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:5,745,364...5,758,177 JBrowse link
G RBM8A RNA binding motif protein 8A IEA UniProt GO_REF:0000044 NCBI chr 4:99,408,422...99,411,964
Ensembl chr 4:99,408,464...99,413,492
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease IEA Ensembl GO_REF:0000107 NCBI chr 1:273,011,736...273,021,956
Ensembl chr 1:273,011,733...273,021,940
JBrowse link
G RFXAP regulatory factor X associated protein ISO HPA GO_REF:0000052 NCBI chr11:12,660,306...12,695,137 JBrowse link
G RING1 ring finger protein 1 IEA UniProt GO_REF:0000044 NCBI chr 7:25,251,507...25,255,526
Ensembl chr 7:25,251,486...25,255,526
JBrowse link
G RMI2 RecQ mediated genome instability 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:31,807,717...31,814,869
Ensembl chr 3:31,808,015...31,814,843
JBrowse link
G RNPS1 RNA binding protein with serine rich domain 1 IEA UniProt GO_REF:0000044 NCBI chr 3:39,739,058...39,749,600
Ensembl chr 3:39,739,308...39,758,376
JBrowse link
G RREB1 ras responsive element binding protein 1 ISO HPA GO_REF:0000052 NCBI chr 7:4,512,286...4,639,961 JBrowse link
G RSRC1 arginine and serine rich coiled-coil 1 IEA Ensembl GO_REF:0000107 NCBI chr13:97,893,815...98,338,108
Ensembl chr13:97,893,851...98,333,700
JBrowse link
G RUFY1 RUN and FYVE domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:78,974,361...79,021,677
Ensembl chr 2:78,963,986...79,021,575
JBrowse link
G S100PBP S100P binding protein IEA Ensembl GO_REF:0000107 NCBI chr 6:89,119,003...89,160,050
Ensembl chr 6:89,119,074...89,160,045
JBrowse link
G SAP130 Sin3A associated protein 130 IEA Ensembl GO_REF:0000107 NCBI chr15:59,312,401...59,408,813
Ensembl chr15:59,312,418...59,410,591
JBrowse link
G SAP18 Sin3A associated protein 18 IEA Ensembl GO_REF:0000107 NCBI chr11:1,290,195...1,298,990
Ensembl chr11:1,291,202...1,298,983
JBrowse link
G SARNP SAP domain containing ribonucleoprotein IEA Ensembl GO_REF:0000107 NCBI chr 5:21,203,048...21,262,437
Ensembl chr 5:21,199,422...21,262,911
JBrowse link
G SART1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP IEA Ensembl GO_REF:0000107 NCBI chr 2:6,355,690...6,373,342
Ensembl chr 2:6,354,908...6,373,274
JBrowse link
G SCNM1 sodium channel modifier 1 IEA UniProt GO_REF:0000044 NCBI chr 4:98,079,844...98,082,374
Ensembl chr 4:98,079,848...98,082,351
JBrowse link
G SDCBP2 syndecan binding protein 2 IEA Ensembl GO_REF:0000107 NCBI chr17:33,967,075...33,985,975
Ensembl chr17:33,961,617...33,985,964
JBrowse link
G SDE2 SDE2 telomere maintenance homolog IEA Ensembl GO_REF:0000107 NCBI chr10:13,879,482...13,897,847
Ensembl chr10:13,879,728...13,897,862
JBrowse link
G SERPINB13 serpin family B member 13 ISO HPA GO_REF:0000052 NCBI chr 1:158,099,811...158,113,526
Ensembl chr 1:158,099,975...158,113,501
JBrowse link
G SETD1A SET domain containing 1A, histone lysine methyltransferase IEA Ensembl GO_REF:0000107 NCBI chr 3:17,463,768...17,490,397
Ensembl chr 3:17,463,768...17,488,594
JBrowse link
G SF3A1 splicing factor 3a subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr14:47,312,460...47,335,448
Ensembl chr14:47,312,464...47,335,398
JBrowse link
G SF3A2 splicing factor 3a subunit 2 ISO RGD PMID:9016565 RGD:10053725 NCBI chr 2:76,404,882...76,414,901
Ensembl chr 2:76,405,253...76,418,312
JBrowse link
G SF3A3 splicing factor 3a subunit 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:93,951,599...93,976,324
Ensembl chr 6:93,950,704...93,976,329
JBrowse link
G SF3B1 splicing factor 3b subunit 1 IEA Ensembl GO_REF:0000107 NCBI chr15:101,274,968...101,338,018
Ensembl chr15:101,191,854...101,338,023
JBrowse link
G SF3B2 splicing factor 3b subunit 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:6,279,039...6,295,550
Ensembl chr 2:6,279,048...6,294,640
JBrowse link
G SFMBT2 Scm like with four mbt domains 2 IEA Ensembl GO_REF:0000107 NCBI chr10:63,877,033...64,070,867
Ensembl chr10:63,877,025...64,070,772
JBrowse link
G SFPQ splicing factor proline and glutamine rich IEA UniProt GO_REF:0000044 NCBI chr 6:91,391,552...91,408,236
Ensembl chr 6:91,391,555...91,408,219
JBrowse link
G SGK1 serum/glucocorticoid regulated kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:29,625,786...29,753,619
Ensembl chr 1:29,625,781...29,753,607
JBrowse link
G SLC2A4RG SLC2A4 regulator IEA Ensembl GO_REF:0000107 NCBI chr17:62,655,992...62,659,620
Ensembl chr17:62,653,032...62,659,617
JBrowse link
G SLC34A1 solute carrier family 34 member 1 IEA Ensembl GO_REF:0000107 NCBI chr 2:80,548,208...80,563,380
Ensembl chr 2:80,548,232...80,563,321
JBrowse link
G SLU7 SLU7 homolog, splicing factor IEA Ensembl GO_REF:0000107 NCBI chr16:63,118,426...63,145,655
Ensembl chr16:63,118,731...63,136,641
JBrowse link
G SMC4 structural maintenance of chromosomes 4 IEA Ensembl GO_REF:0000107 NCBI chr13:100,078,149...100,120,907
Ensembl chr13:100,078,158...100,133,166
JBrowse link
G SMC5 structural maintenance of chromosomes 5 ISO HPA GO_REF:0000052 NCBI chr 1:223,560,271...223,653,370 JBrowse link
G SMURF2 SMAD specific E3 ubiquitin protein ligase 2 IEA Ensembl GO_REF:0000107 NCBI chr12:14,368,683...14,492,129
Ensembl chr12:14,368,256...14,489,017
JBrowse link
G SNRNP40 small nuclear ribonucleoprotein U5 subunit 40 IEA Ensembl GO_REF:0000107 NCBI chr 6:87,838,894...87,879,623
Ensembl chr 6:87,839,333...87,879,573
JBrowse link
G SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 IEA Ensembl GO_REF:0000107 NCBI chr 6:54,288,354...54,304,272
Ensembl chr 6:54,288,354...54,304,270
JBrowse link
G SNRPA1 small nuclear ribonucleoprotein polypeptide A' IEA Ensembl GO_REF:0000107 NCBI chr 1:145,707,393...145,719,287
Ensembl chr 1:145,707,412...145,719,386
JBrowse link
G SNRPB2 small nuclear ribonucleoprotein polypeptide B2 ISO HPA GO_REF:0000052 NCBI chr17:25,363,107...25,373,289 JBrowse link
G SNURF SNRPN upstream reading frame ISO HPA GO_REF:0000052
G SNW1 SNW domain containing 1 ISO (PMID:23566155) CAFA PMID:23566155 NCBI chr 7:100,718,298...100,749,414
Ensembl chr 7:100,718,036...100,749,356
JBrowse link
G SON SON DNA and RNA binding protein IEA Ensembl GO_REF:0000107 NCBI chr13:197,162,075...197,193,417
Ensembl chr13:197,162,114...197,194,078
JBrowse link
G SPOP speckle type BTB/POZ protein ISO (MGI:MGI:3041886|PMID:15121856), (MGI:MGI:4355593|PMID:19684112) MGI PMID:15121856, PMID:19684112 MGI:MGI:3041886, MGI:MGI:4355593 NCBI chr12:25,792,621...25,860,630
Ensembl chr12:25,792,626...25,860,712
JBrowse link
G SPRTN SprT-like N-terminal domain IEA Ensembl GO_REF:0000107 NCBI chr14:59,177,801...59,192,221
Ensembl chr14:59,171,170...59,192,270
JBrowse link
G SREK1 splicing regulatory glutamic acid and lysine rich protein 1 IEA Ensembl GO_REF:0000107 NCBI chr16:44,578,531...44,621,898
Ensembl chr16:44,578,783...44,620,094
JBrowse link
G SRP54 signal recognition particle 54 IEA UniProt GO_REF:0000044 NCBI chr 7:64,829,625...64,877,574
Ensembl chr 7:64,828,874...64,877,193
JBrowse link
G SRPK1 SRSF protein kinase 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:31,645,753...31,701,305
Ensembl chr 7:31,645,755...31,701,405
JBrowse link
G SRPK2 SRSF protein kinase 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:105,009,550...105,264,689
Ensembl chr 9:105,006,986...105,265,595
JBrowse link
G SRRM1 serine and arginine repetitive matrix 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:82,309,192...82,348,076
Ensembl chr 6:82,242,953...82,343,786
JBrowse link
G SRRM2 serine/arginine repetitive matrix 2 IEA Ensembl GO_REF:0000107 NCBI chr 3:39,275,274...39,293,741
Ensembl chr 3:39,275,288...39,293,738
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr12:34,278,363...34,282,164
Ensembl chr12:34,272,068...34,282,137
JBrowse link
G SRSF10 serine and arginine rich splicing factor 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:81,727,893...81,741,516
Ensembl chr 6:81,727,896...81,741,497
JBrowse link
G SRSF11 serine and arginine rich splicing factor 11 IEA Ensembl GO_REF:0000107 NCBI chr 6:142,621,904...142,668,107
Ensembl chr 6:142,621,924...142,642,073
JBrowse link
G SRSF12 serine and arginine rich splicing factor 12 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:57,145,078...57,166,138
Ensembl chr 1:57,148,582...57,165,689
JBrowse link
G SRSF2 serine and arginine rich splicing factor 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:4,800,578...4,803,767
Ensembl chr12:4,800,624...4,803,764
JBrowse link
G SRSF3 serine and arginine rich splicing factor 3 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:32,289,464...32,298,652
Ensembl chr 7:32,289,480...32,298,589
JBrowse link
G SRSF4 serine and arginine rich splicing factor 4 IEA Ensembl GO_REF:0000107 NCBI chr 6:86,064,776...86,092,769
Ensembl chr 6:85,891,364...86,131,682
JBrowse link
G SRSF5 serine and arginine rich splicing factor 5 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:93,393,379...93,398,510
Ensembl chr 7:93,393,426...93,403,015
JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:46,119,612...46,122,540
Ensembl chr17:46,119,409...46,173,944
JBrowse link
G SRSF7 serine and arginine rich splicing factor 7 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:101,599,429...101,608,786
Ensembl chr 3:101,603,705...101,613,241
JBrowse link
G SRSF9 serine and arginine rich splicing factor 9 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:40,425,412...40,433,950
Ensembl chr14:40,419,091...40,434,048
JBrowse link
G SRY sex determining region Y IEA UniProt GO_REF:0000044 NCBI chr  Y:40,484,990...40,485,700
Ensembl chr  Y:40,484,990...40,485,700
JBrowse link
G STK17A serine/threonine kinase 17a IEA Ensembl GO_REF:0000107 NCBI chr18:51,325,438...51,362,181
Ensembl chr18:51,322,238...51,362,178
JBrowse link
G STK19 serine/threonine kinase 19 IEA Ensembl GO_REF:0000107 NCBI chr 7:24,060,226...24,067,398
Ensembl chr 7:24,059,452...24,067,383
JBrowse link
G SUMO1 small ubiquitin like modifier 1 IEA UniProt GO_REF:0000044 NCBI chr15:105,820,237...105,850,099
Ensembl chr15:105,815,281...105,850,943
JBrowse link
G SURF2 surfeit 2 IEA Ensembl GO_REF:0000107 NCBI chr 1:272,970,522...272,976,188
Ensembl chr 1:272,970,548...272,975,293
JBrowse link
G SYF2 SYF2 pre-mRNA splicing factor IEA Ensembl GO_REF:0000107 NCBI chr 6:82,836,894...82,843,484
Ensembl chr 6:82,836,455...82,843,407
JBrowse link
G SYNPO2L synaptopodin 2 like IEA Ensembl GO_REF:0000107 NCBI chr14:76,456,170...76,466,661
Ensembl chr14:76,456,167...76,473,423
JBrowse link
G TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:8,827,363...8,852,814
Ensembl chr 5:8,826,840...8,852,776
JBrowse link
G TAF5L TATA-box binding protein associated factor 5 like IEA Ensembl GO_REF:0000107 NCBI chr14:60,254,502...60,286,368
Ensembl chr14:60,223,432...60,302,958
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member ISO HPA GO_REF:0000052 NCBI chr 7:25,045,085...25,056,915 JBrowse link
G TARDBP TAR DNA binding protein ISO RGD PMID:19539030 RGD:5687141 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,852...71,227,704
JBrowse link
G TBXA2R thromboxane A2 receptor IEA Ensembl GO_REF:0000107 NCBI chr 2:75,068,413...75,081,305
Ensembl chr 2:75,068,698...75,087,731
JBrowse link
G TCF12 transcription factor 12 IEA Ensembl GO_REF:0000107 NCBI chr 1:114,682,299...115,056,363
Ensembl chr 1:114,682,295...115,056,366
JBrowse link
G TCIM transcriptional and immune response regulator IEA Ensembl GO_REF:0000107 NCBI chr17:9,441,488...9,443,053
Ensembl chr17:9,441,766...9,442,086
JBrowse link
G TEPSIN TEPSIN adaptor related protein complex 4 accessory protein ISO HPA GO_REF:0000052 NCBI chr12:1,519,760...1,529,542
Ensembl chr12:1,519,760...1,529,542
JBrowse link
G TERT telomerase reverse transcriptase IEA Ensembl GO_REF:0000107 NCBI chr16:79,258,591...79,276,421
Ensembl chr16:79,258,591...79,276,421
JBrowse link
G TFIP11 tuftelin interacting protein 11 IEA Ensembl GO_REF:0000107 NCBI chr14:44,097,026...44,113,760
Ensembl chr14:44,096,264...44,113,682
JBrowse link
G THAP7 THAP domain containing 7 IEA Ensembl GO_REF:0000107 NCBI chr14:50,591,412...50,593,778
Ensembl chr14:50,591,440...50,593,580
JBrowse link
G THOC1 THO complex 1 IEA Ensembl GO_REF:0000107 NCBI chr 6:106,039,262...106,088,125
Ensembl chr 6:106,040,042...106,088,026
JBrowse link
G THOC6 THO complex 6 IEA Ensembl GO_REF:0000107 NCBI chr 3:39,161,442...39,164,631
Ensembl chr 3:39,161,434...39,168,302
JBrowse link
G THOC7 THO complex 7 IEA Ensembl GO_REF:0000107 NCBI chr13:45,335,160...45,356,233
Ensembl chr13:45,334,028...45,356,060
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 IEA Ensembl GO_REF:0000107 NCBI chr 6:92,350,021...92,412,335
Ensembl chr 6:92,350,073...92,412,330
JBrowse link
G TIMM50 translocase of inner mitochondrial membrane 50 IEA Ensembl GO_REF:0000107 NCBI chr 6:48,126,470...48,134,664
Ensembl chr 6:48,126,991...48,139,357
JBrowse link
G TKT transketolase IEA Ensembl GO_REF:0000107 NCBI chr13:35,348,921...35,377,518
Ensembl chr13:35,348,912...35,377,580
JBrowse link
G TMEM179B transmembrane protein 179B IEA Ensembl GO_REF:0000107 NCBI chr 2:8,983,822...8,986,106
Ensembl chr 2:8,983,824...8,986,094
JBrowse link
G TOPORS TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:33,865,967...33,878,135
Ensembl chr10:33,865,959...33,933,453
JBrowse link
G TRIM69 tripartite motif containing 69 IEA Ensembl GO_REF:0000107 NCBI chr 1:126,775,856...126,788,628
Ensembl chr 1:126,775,531...126,816,846
JBrowse link
G TRIP11 thyroid hormone receptor interactor 11 IEA Ensembl GO_REF:0000107 NCBI chr 7:113,524,406...113,600,411
Ensembl chr 7:113,524,430...113,600,084
JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 IEA Ensembl GO_REF:0000107 NCBI chr15:130,784,567...130,940,497
Ensembl chr15:130,787,581...130,939,575
JBrowse link
G TUT1 terminal uridylyl transferase 1, U6 snRNA-specific IEA UniProt GO_REF:0000044 NCBI chr 2:9,148,563...9,161,918 JBrowse link
G U2AF1 U2 small nuclear RNA auxiliary factor 1 ISS
IEA
UniProt
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr13:206,244,772...206,257,697 JBrowse link
G U2AF2 U2 small nuclear RNA auxiliary factor 2 IEA Ensembl GO_REF:0000107 NCBI chr 6:59,773,205...59,789,403
Ensembl chr 6:59,774,078...59,789,396
JBrowse link
G UNC45A unc-45 myosin chaperone A IEA Ensembl GO_REF:0000107 NCBI chr 7:53,530,914...53,545,960
Ensembl chr 7:53,529,605...53,545,960
JBrowse link
G USP36 ubiquitin specific peptidase 36 ISO HPA GO_REF:0000052 NCBI chr12:3,309,176...3,348,531 JBrowse link
G VIRMA vir like m6A methyltransferase associated IEA Ensembl GO_REF:0000107 NCBI chr 4:42,162,424...42,236,310
Ensembl chr 4:42,162,431...42,253,172
JBrowse link
G VPS72 vacuolar protein sorting 72 homolog IEA Ensembl GO_REF:0000107 NCBI chr 4:98,062,261...98,074,074
Ensembl chr 4:98,062,256...98,074,059
JBrowse link
G WBP11 WW domain binding protein 11 ISO (MGI:MGI:3028820|PMID:14640981) MGI PMID:14640981 MGI:MGI:3028820 NCBI chr 5:57,749,948...57,766,788 JBrowse link
G WBP4 WW domain binding protein 4 IEA Ensembl GO_REF:0000107 NCBI chr11:25,735,209...25,772,555
Ensembl chr11:25,731,390...25,771,961
JBrowse link
G WRN WRN RecQ like helicase IEA Ensembl GO_REF:0000107 NCBI chr15:53,966,968...54,094,855
Ensembl chr15:53,966,972...54,094,587
JBrowse link
G WT1 WT1 transcription factor ISS
IEA
UniProt GO_REF:0000024, GO_REF:0000044 NCBI chr 2:28,411,467...28,456,007
Ensembl chr 2:28,411,794...28,456,003
JBrowse link
G WTAP WT1 associated protein IEA Ensembl GO_REF:0000107 NCBI chr 1:7,622,544...7,651,732
Ensembl chr 1:7,622,544...7,651,961
JBrowse link
G YLPM1 YLP motif containing 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:97,976,129...98,042,234
Ensembl chr 7:97,976,144...98,042,231
JBrowse link
G YTHDC1 YTH domain containing 1 ISO (PMID:26876937) UniProtKB PMID:26876937 NCBI chr 8:66,086,528...66,122,717
Ensembl chr 8:65,999,525...66,122,711
JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 IEA Ensembl GO_REF:0000107 NCBI chr 9:41,639,536...41,839,254
Ensembl chr 9:41,639,701...41,836,742
JBrowse link
G ZBTB18 zinc finger and BTB domain containing 18 IEA Ensembl GO_REF:0000107 NCBI chr10:16,913,022...16,921,722
Ensembl chr10:16,915,501...16,923,527
JBrowse link
G ZC3H13 zinc finger CCCH-type containing 13 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:21,298,855...21,387,557
Ensembl chr11:21,298,855...21,387,972
JBrowse link
G ZC3H14 zinc finger CCCH-type containing 14 IEA Ensembl GO_REF:0000107 NCBI chr 7:110,463,459...110,513,231
Ensembl chr 7:110,463,517...110,513,272
JBrowse link
G ZC3H18 zinc finger CCCH-type containing 18 IEA Ensembl GO_REF:0000107 NCBI chr 6:1,030,416...1,081,541
Ensembl chr 6:1,030,416...1,081,538
JBrowse link
G ZNF217 zinc finger protein 217 IEA Ensembl GO_REF:0000107 NCBI chr17:54,605,939...54,648,868
Ensembl chr17:54,605,943...54,648,736
JBrowse link
G ZNF830 zinc finger protein 830 IEA UniProt GO_REF:0000044 Ensembl chr12:40,203,942...40,205,045 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16940
    cellular anatomical entity 16852
      nuclear body 719
        nuclear speck 338
          omega speckle 0
Path 2
Term Annotations click to browse term
  cellular_component 16940
    cellular anatomical entity 16852
      organelle 11466
        membrane-bounded organelle 10091
          intracellular membrane-bounded organelle 9406
            nucleus 6317
              nuclear lumen 3660
                nucleoplasm 3231
                  nuclear body 719
                    nuclear speck 338
                      omega speckle 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.