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ONTOLOGY REPORT - ANNOTATIONS


Term:nuclear speck
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Accession:GO:0016607 term browser browse the term
Definition:A discrete extra-nucleolar subnuclear domain, 20-50 in number, in which splicing factors are seen to be localized by immunofluorescence microscopy.
Synonyms:exact_synonym: nuclear speckle;   nuclear speckles;   splicing speckle
 narrow_synonym: speckle domain
 related_synonym: speckle focus


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nuclear speck term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aagab alpha and gamma adaptin binding protein JBrowse link NW_004955450 8,694,829 8,742,816 RGD:9068941
G Abitram actin binding transcription modulator JBrowse link NW_004955419 18,029,763 18,034,945 RGD:9068941
G Acin1 apoptotic chromatin condensation inducer 1 JBrowse link NW_004955409 37,206,675 37,246,851 RGD:9068941
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif 4 JBrowse link NW_004955468 12,950,333 12,958,599 RGD:9068941
G Adar adenosine deaminase RNA specific JBrowse link NW_004955545 1,078,319 1,106,938 RGD:9068941
G Afdn afadin, adherens junction formation factor JBrowse link NW_004955439 14,324,910 14,428,846 RGD:9068941
G Aff2 AF4/FMR2 family member 2 JBrowse link NW_004955498 1,012,323 1,497,031 RGD:9068941
G Ak6 adenylate kinase 6 JBrowse link NW_004955575 61,082 78,415 RGD:9068941
G Akap17a A-kinase anchoring protein 17A JBrowse link NW_004955499 1,119,658 1,130,250 RGD:9068941
G Akap8l A-kinase anchoring protein 8 like JBrowse link NW_004955495 7,839,339 7,874,432 RGD:9068941
G Alkbh5 alkB homolog 5, RNA demethylase JBrowse link NW_004955478 11,104,445 11,128,980 RGD:9068941
G Alyref Aly/REF export factor JBrowse link NW_004955506 1,278,230 1,282,064 RGD:9068941
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 JBrowse link NW_004955460 10,997,554 11,009,435 RGD:9068941
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link NW_004955550 1,273,170 1,275,843 RGD:9068941
G Api5 apoptosis inhibitor 5 JBrowse link NW_004955422 4,121,913 4,149,242 RGD:9068941
G Ar androgen receptor JBrowse link NW_004955475 7,013,960 7,192,473 RGD:9068941
G Arhgap18 Rho GTPase activating protein 18 JBrowse link NW_004955436 10,470,398 10,642,890 RGD:9068941
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 JBrowse link NW_004955451 16,396,287 16,442,596 RGD:9068941
G Atpaf2 ATP synthase mitochondrial F1 complex assembly factor 2 JBrowse link NW_004955478 11,249,073 11,264,249 RGD:9068941
G Atxn2l ataxin 2 like JBrowse link NW_004955493 6,626,106 6,637,678 RGD:9068941
G Bard1 BRCA1 associated RING domain 1 JBrowse link NW_004955457 1,187,942 1,258,475 RGD:9068941
G Basp1 brain abundant membrane attached signal protein 1 JBrowse link NW_004955426 6,149,756 6,193,222 RGD:9068941
G Baz2a bromodomain adjacent to zinc finger domain 2A JBrowse link NW_004955458 4,149,610 4,186,647 RGD:9068941
G Bcas2 BCAS2 pre-mRNA processing factor JBrowse link NW_004955435 17,830,532 17,857,360 RGD:9068941
G Bclaf1 BCL2 associated transcription factor 1 JBrowse link NW_004955439 608,849 641,005 RGD:9068941
G Bdnf brain derived neurotrophic factor JBrowse link NW_004955476 6,773,244 6,822,201 RGD:9068941
G Bmp2k BMP2 inducible kinase JBrowse link NW_004955433 3,207,512 3,327,688 RGD:9068941
G Bnip3l BCL2 interacting protein 3 like JBrowse link NW_004955403 49,122,408 49,144,162 RGD:9068941
G Brd1 bromodomain containing 1 JBrowse link NW_004955413 32,935,827 32,973,820 RGD:9068941
G Brd2 bromodomain containing 2 JBrowse link NW_004955437 1,584,890 1,592,486 RGD:9068941
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 JBrowse link NW_004955440 17,364,996 17,497,446 RGD:9068941
G Cactin cactin, spliceosome C complex subunit JBrowse link NW_004955495 5,561,359 5,571,945 RGD:9068941
G Carmil1 capping protein regulator and myosin 1 linker 1 JBrowse link NW_004955483 1,463,856 1,770,798 RGD:9068941
G Cbll1 Cbl proto-oncogene like 1 JBrowse link NW_004955410 12,078,448 12,093,641 RGD:9068941
G Ccnb3 cyclin B3 JBrowse link NW_004955543 1,377,932 1,444,327 RGD:9068941
G Cd2bp2 CD2 cytoplasmic tail binding protein 2 JBrowse link NW_004955493 7,281,073 7,283,879 RGD:9068941
G Cdc25c cell division cycle 25C JBrowse link NW_004955418 2,114,053 2,138,513 RGD:9068941
G Cdc34 cell division cycle 34, ubiqiutin conjugating enzyme JBrowse link NW_004955495 7,170,419 7,178,093 RGD:9068941
G Cdc40 cell division cycle 40 JBrowse link NW_004955411 34,966,797 35,007,577 RGD:9068941
G Cdc5l cell division cycle 5 like JBrowse link NW_004955437 9,990,613 10,032,034 RGD:9068941
G Cdk12 cyclin dependent kinase 12 JBrowse link NW_004955451 14,244,392 14,345,885 RGD:9068941
G Cdk13 cyclin dependent kinase 13 JBrowse link NW_004955460 3,590,854 3,701,148 RGD:9068941
G Cdyl chromodomain Y like JBrowse link NW_004955465 8,570,197 8,780,551 RGD:9068941
G Chd5 chromodomain helicase DNA binding protein 5 JBrowse link NW_004955486 6,320,380 6,369,020 RGD:9068941
G Chtop chromatin target of PRMT1 JBrowse link NW_004955545 282,342 292,428 RGD:9068941
G Cir1 corepressor interacting with RBPJ, CIR1 JBrowse link NW_004955449 960,524 993,720 RGD:9068941
G Ckap4 cytoskeleton associated protein 4 JBrowse link NW_004955405 40,277,082 40,279,486 RGD:9068941
G Cnot7 CCR4-NOT transcription complex subunit 7 JBrowse link NW_004955463 285,228 306,077 RGD:9068941
G Cops4 COP9 signalosome subunit 4 JBrowse link NW_004955474 6,540,022 6,581,881 RGD:9068941
G Cpsf6 cleavage and polyadenylation specific factor 6 JBrowse link NW_004955458 15,684,040 15,708,011 RGD:9068941
G Cry2 cryptochrome circadian regulator 2 JBrowse link NW_004955422 2,084,020 2,114,980 RGD:9068941
G Csnk1a1 casein kinase 1 alpha 1 JBrowse link NW_004955415 4,921,356 4,966,705 RGD:9068941
G Cwc15 CWC15 spliceosome associated protein homolog JBrowse link NW_004955605 32,721 42,981 RGD:9068941
G Cwc22 CWC22 spliceosome associated protein homolog JBrowse link NW_004955403 17,070,588 17,125,918 RGD:9068941
G Cwc25 CWC25 spliceosome associated protein homolog JBrowse link NW_004955451 13,867,570 13,884,433 RGD:9068941
G Cxxc1 CXXC finger protein 1 JBrowse link NW_004955402 35,335,520 35,340,891 RGD:9068941
G Dazap2 DAZ associated protein 2 JBrowse link NW_004955547 1,736,945 1,741,623 RGD:9068941
G Ddx17 DEAD-box helicase 17 JBrowse link NW_004955413 24,646,317 24,664,614 RGD:9068941
G Ddx39a DExD-box helicase 39A JBrowse link NW_004955415 33,021,976 33,030,479 RGD:9068941
G Ddx39b DExD-box helicase 39B JBrowse link NW_004955437 72,835 84,045 RGD:9068941
G Ddx42 DEAD-box helicase 42 JBrowse link NW_004955478 8,009,155 8,052,990 RGD:9068941
G Ddx46 DEAD-box helicase 46 JBrowse link NW_004955408 29,981,509 30,031,473 RGD:9068941
G Dennd1b DENN domain containing 1B JBrowse link NW_004955406 34,021,508 34,241,735 RGD:9068941
G Dgkq diacylglycerol kinase theta JBrowse link NW_004955514 452,548 475,240 RGD:9068941
G Dgkz diacylglycerol kinase zeta JBrowse link NW_004955422 1,658,237 1,687,000 RGD:9068941
G Dhx15 DEAH-box helicase 15 JBrowse link NW_004955480 451,126 502,226 RGD:9068941
G Dhx36 DEAH-box helicase 36 JBrowse link NW_004955448 5,634,072 5,676,272 RGD:9068941
G Dnaaf1 dynein axonemal assembly factor 1 JBrowse link NW_004955564 132,497 149,399 RGD:9068941
G Dock1 dedicator of cytokinesis 1 JBrowse link NW_004955477 4,725,780 5,243,812 RGD:9068941
G Dusp10 dual specificity phosphatase 10 JBrowse link NW_004955520 2,338,548 2,371,591 RGD:9068941
G Dusp11 dual specificity phosphatase 11 JBrowse link NW_004955424 11,978,118 11,990,169 RGD:9068941
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A JBrowse link NW_004955407 36,456,628 36,588,940 RGD:9068941
G Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 JBrowse link NW_004955406 42,190,043 42,199,323 RGD:9068941
G E2f7 E2F transcription factor 7 JBrowse link NW_004955405 16,148,640 16,187,272 RGD:9068941
G Eftud2 elongation factor Tu GTP binding domain containing 2 JBrowse link NW_004955451 17,655,659 17,690,117 RGD:9068941
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link NW_004955437 396,736 411,144 RGD:9068941
G Ell elongation factor for RNA polymerase II JBrowse link NW_004955524 3,054,296 3,094,125 RGD:9068941
G Ep400 E1A binding protein p400 JBrowse link NW_004955482 639,316 746,331 RGD:9068941
G Epas1 endothelial PAS domain protein 1 JBrowse link NW_004955441 13,244,626 13,328,220 RGD:9068941
G Epor erythropoietin receptor JBrowse link NW_004955495 2,293,587 2,299,302 RGD:9068941
G Erbin erbb2 interacting protein JBrowse link NW_004955446 3,046,268 3,151,796 RGD:9068941
G Esx1 ESX homeobox 1 JBrowse link NW_004955548 1,087,441 1,095,070 RGD:9068941
G Fam107a family with sequence similarity 107 member A JBrowse link NW_004955430 1,606,696 1,625,098 RGD:9068941
G Fam193b family with sequence similarity 193 member B JBrowse link NW_004955408 29,756,057 29,788,349 RGD:9068941
G Fam76b family with sequence similarity 76 member B JBrowse link NW_004955412 617,089 664,452 RGD:9068941
G Fastk Fas activated serine/threonine kinase JBrowse link NW_004955491 5,513,482 5,516,681 RGD:9068941
G Fbxl4 F-box and leucine rich repeat protein 4 JBrowse link NW_004955411 24,757,445 24,814,642 RGD:9068941
G Fev FEV transcription factor, ETS family member JBrowse link NW_004955453 14,449,352 14,453,145 RGD:9068941
G Fibp FGF1 intracellular binding protein JBrowse link NW_004955422 19,435,528 19,440,095 RGD:9068941
G Fnbp4 formin binding protein 4 JBrowse link NW_004955422 613,817 641,691 RGD:9068941
G Fndc1 fibronectin type III domain containing 1 JBrowse link NW_004955439 3,251,851 3,356,679 RGD:9068941
G Foxo4 forkhead box O4 JBrowse link NW_004955475 10,666,024 10,673,717 RGD:9068941
G Fto FTO alpha-ketoglutarate dependent dioxygenase JBrowse link NW_004955433 11,424,069 11,834,955 RGD:9068941
G Fyttd1 forty-two-three domain containing 1 JBrowse link NW_004955420 12,095,055 12,123,900 RGD:9068941
G Gadd45a growth arrest and DNA damage inducible alpha JBrowse link NW_004955423 23,656,516 23,658,367 RGD:9068941
G Gcat glycine C-acetyltransferase JBrowse link NW_004955413 24,184,997 24,192,178 RGD:9068941
G Gli2 GLI family zinc finger 2 JBrowse link NW_004955459 8,892,917 9,124,672 RGD:9068941
G Gli3 GLI family zinc finger 3 JBrowse link NW_004955460 1,528,457 1,805,584 RGD:9068941
G Glis2 GLIS family zinc finger 2 JBrowse link NW_004955442 13,097,636 13,113,514 RGD:9068941
G Gpatch2 G-patch domain containing 2 JBrowse link NW_004955406 800,496 963,004 RGD:9068941
G Grk5 G protein-coupled receptor kinase 5 JBrowse link NW_004955551 43,918 255,118 RGD:9068941
G Gtf2e2 general transcription factor IIE subunit 2 JBrowse link NW_004955463 7,000,868 7,080,778 RGD:9068941
G Gtf2h4 general transcription factor IIH subunit 4 JBrowse link NW_004955583 842,750 847,575 RGD:9068941
G Habp4 hyaluronan binding protein 4 JBrowse link NW_004955422 23,449,175 23,475,919 RGD:9068941
G Haus6 HAUS augmin like complex subunit 6 JBrowse link NW_004955434 21,516,668 21,557,565 RGD:9068941
G Hbp1 HMG-box transcription factor 1 JBrowse link NW_004955410 11,626,743 11,652,343 RGD:9068941
G Hdac4 histone deacetylase 4 JBrowse link NW_004955542 1,629,691 1,886,160 RGD:9068941
G Hdac5 histone deacetylase 5 JBrowse link NW_004955451 17,223,217 17,246,451 RGD:9068941
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link NW_004955466 8,000,311 8,022,497 RGD:9068941
G Hif3a hypoxia inducible factor 3 subunit alpha JBrowse link NW_004955574 490,702 520,867 RGD:9068941
G Hikeshi heat shock protein nuclear import factor hikeshi JBrowse link NW_004955414 6,632,434 6,656,633 RGD:9068941
G Hipk1 homeodomain interacting protein kinase 1 JBrowse link NW_004955435 17,201,866 17,257,371 RGD:9068941
G Hnrnpu heterogeneous nuclear ribonucleoprotein U JBrowse link NW_004955406 8,000,269 8,021,554 RGD:9068941
G Hoxa6 homeobox A6 JBrowse link NW_004955410 28,839,924 28,844,328 RGD:9068941
G Hoxb2 homeobox B2 JBrowse link NW_004955451 12,693,764 12,697,825 RGD:9068941
G Hp1bp3 heterochromatin protein 1 binding protein 3 JBrowse link NW_004955452 1,271,133 1,308,167 RGD:9068941
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 JBrowse link NW_004955459 2,273,100 2,310,993 RGD:9068941
G Hsf4 heat shock transcription factor 4 JBrowse link NW_004955484 9,447,641 9,452,784 RGD:9068941
G Hspb3 heat shock protein family B (small) member 3 JBrowse link NW_004955446 13,113,854 13,114,599 RGD:9068941
G Ifi16 interferon gamma inducible protein 16 JBrowse link NW_004955468 10,828,726 10,845,853 RGD:9068941
G Ik IK cytokine JBrowse link NW_004955418 39,695 52,862 RGD:9068941
G Il15 interleukin 15 JBrowse link NW_004955471 1,496,352 1,583,919 RGD:9068941
G Il16 interleukin 16 JBrowse link NW_004955416 11,876,317 11,987,548 RGD:9068941
G Inppl1 inositol polyphosphate phosphatase like 1 JBrowse link NW_004955414 19,146,304 19,163,923 RGD:9068941
G Itpkc inositol-trisphosphate 3-kinase C JBrowse link NW_004955578 597,105 614,081 RGD:9068941
G Jade1 jade family PHD finger 1 JBrowse link NW_004955428 12,762,629 12,835,310 RGD:9068941
G Kat6a lysine acetyltransferase 6A JBrowse link NW_004955536 900,198 1,015,520 RGD:9068941
G Kazn kazrin, periplakin interacting protein JBrowse link NW_004955527 2,963,713 3,970,331 RGD:9068941
G Kif22 kinesin family member 22 JBrowse link NW_004955493 7,155,307 7,173,576 RGD:9068941
G Lhpp phospholysine phosphohistidine inorganic pyrophosphate phosphatase JBrowse link NW_004955477 2,480,660 2,606,887 RGD:9068941
G Limk1 LIM domain kinase 1 JBrowse link NW_004955456 13,751,135 13,773,722 RGD:9068941
G LOC102009926 chromosome unknown open reading frame, human C12orf57 JBrowse link NW_004955413 4,524,236 4,525,760 RGD:9068941
G LOC102025775 histone H2AX JBrowse link NW_004955412 20,203,173 20,204,714 RGD:9068941
G Lpxn leupaxin JBrowse link NW_004955511 3,459,521 3,500,181 RGD:9068941
G Luc7l3 LUC7 like 3 pre-mRNA splicing factor JBrowse link NW_004955451 11,027,949 11,062,521 RGD:9068941
G Maml3 mastermind like transcriptional coactivator 3 JBrowse link NW_004955428 3,602,255 4,009,994 RGD:9068941
G Mapk14 mitogen-activated protein kinase 14 JBrowse link NW_004955437 3,836,331 3,884,083 RGD:9068941
G Mapt microtubule associated protein tau JBrowse link NW_004955478 10,222,439 10,271,439 RGD:9068941
G Mbd1 methyl-CpG binding domain protein 1 JBrowse link NW_004955402 35,320,755 35,334,751 RGD:9068941
G Mbd4 methyl-CpG binding domain 4, DNA glycosylase JBrowse link NW_004955429 17,858,656 17,868,111 RGD:9068941
G Mecom MDS1 and EVI1 complex locus JBrowse link NW_004955448 18,259,847 18,542,085 RGD:9068941
G Mef2c myocyte enhancer factor 2C JBrowse link NW_004955418 22,537,388 22,701,434 RGD:9068941
G Mettl3 methyltransferase like 3 JBrowse link NW_004955550 2,211,270 2,227,715 RGD:9068941
G Mocs2 molybdenum cofactor synthesis 2 JBrowse link NW_004955446 14,295,737 14,305,735 RGD:9068941
G Morf4l1 mortality factor 4 like 1 JBrowse link NW_004955533 14,770 28,290 RGD:9068941
G Msl1 MSL complex subunit 1 JBrowse link NW_004955451 14,769,893 14,783,213 RGD:9068941
G Msx2 msh homeobox 2 JBrowse link NW_004955408 27,323,405 27,329,484 RGD:9068941
G Nampt nicotinamide phosphoribosyltransferase JBrowse link NW_004955410 10,717,664 10,742,109 RGD:9068941
G Ncapg2 non-SMC condensin II complex subunit G2 JBrowse link NW_004955579 896,507 955,515 RGD:9068941
G Ncbp3 nuclear cap binding subunit 3 JBrowse link NW_004955467 13,011,755 13,043,161 RGD:9068941
G Ndufb1 NADH:ubiquinone oxidoreductase subunit B1 JBrowse link NW_004955438 14,443,558 14,449,754 RGD:9068941
G Nfatc4 nuclear factor of activated T cells 4 JBrowse link NW_004955409 35,931,208 35,941,555 RGD:9068941
G Nfkbiz NFKB inhibitor zeta JBrowse link NW_004955427 3,350,174 3,358,609 RGD:9068941
G Noc3l NOC3 like DNA replication regulator JBrowse link NW_004955507 827,994 858,941 RGD:9068941
G Npm1 nucleophosmin 1 JBrowse link NW_004955408 24,151,070 24,218,783 RGD:9068941
G Nr0b1 nuclear receptor subfamily 0 group B member 1 JBrowse link NW_004955531 567,491 572,329 RGD:9068941
G Nr3c1 nuclear receptor subfamily 3 group C member 1 JBrowse link NW_004955415 10,494,704 10,585,778 RGD:9068941
G Nr4a2 nuclear receptor subfamily 4 group A member 2 JBrowse link NW_004955449 16,928,780 16,944,536 RGD:9068941
G Nrde2 NRDE-2, necessary for RNA interference, domain containing JBrowse link NW_004955438 12,726,206 12,780,364 RGD:9068941
G Nrip1 nuclear receptor interacting protein 1 JBrowse link NW_004955407 16,740,253 16,820,297 RGD:9068941
G Nsl1 NSL1 component of MIS12 kinetochore complex JBrowse link NW_004955406 4,764,439 4,798,499 RGD:9068941
G Nsrp1 nuclear speckle splicing regulatory protein 1 JBrowse link NW_004955481 3,142,009 3,192,060 RGD:9068941
G Nuak2 NUAK family kinase 2 JBrowse link NW_004955406 41,050,396 41,069,066 RGD:9068941
G Nxf1 nuclear RNA export factor 1 JBrowse link NW_004955599 439,773 450,834 RGD:9068941
G Ogg1 8-oxoguanine DNA glycosylase JBrowse link NW_004955561 1,277,362 1,282,949 RGD:9068941
G Oip5 Opa interacting protein 5 JBrowse link NW_004955416 8,168,143 8,178,459 RGD:9068941
G Osgep O-sialoglycoprotein endopeptidase JBrowse link NW_004955550 1,266,191 1,273,093 RGD:9068941
G Pacsin2 protein kinase C and casein kinase substrate in neurons 2 JBrowse link NW_004955413 28,119,769 28,209,258 RGD:9068941
G Parn poly(A)-specific ribonuclease JBrowse link NW_004955442 4,255,726 4,421,083 RGD:9068941
G Pasd1 PAS domain containing repressor 1 JBrowse link NW_004955498 7,127,978 7,194,359 RGD:9068941
G Pcbp1 poly(rC) binding protein 1 JBrowse link NW_004955424 15,045,642 15,047,184 RGD:9068941
G Pdx1 pancreatic and duodenal homeobox 1 JBrowse link NW_004955497 7,281,886 7,307,969 RGD:9068941
G Phf5a PHD finger protein 5A JBrowse link NW_004955413 27,018,730 27,026,937 RGD:9068941
G Phf7 PHD finger protein 7 JBrowse link NW_004955430 2,400,866 2,413,188 RGD:9068941
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase type 1 alpha JBrowse link NW_004955588 555,818 605,459 RGD:9068941
G Plag1 PLAG1 zinc finger JBrowse link NW_004955454 15,239,042 15,281,669 RGD:9068941
G Plcb1 phospholipase C beta 1 JBrowse link NW_004955415 18,210,608 18,915,099 RGD:9068941
G Plrg1 pleiotropic regulator 1 JBrowse link NW_004955471 8,764,465 8,777,396 RGD:9068941
G Pnisr PNN interacting serine and arginine rich protein JBrowse link NW_004955411 25,270,569 25,297,571 RGD:9068941
G Pnn pinin, desmosome associated protein JBrowse link NW_004955409 22,102,016 22,110,505 RGD:9068941
G Poldip3 DNA polymerase delta interacting protein 3 JBrowse link NW_004955413 27,944,109 27,968,156 RGD:9068941
G Poli DNA polymerase iota JBrowse link NW_004955402 38,866,528 38,891,235 RGD:9068941
G Polr2d RNA polymerase II subunit D JBrowse link NW_004955459 2,687,005 2,696,388 RGD:9068941
G Polr3d RNA polymerase III subunit D JBrowse link NW_004955403 45,721,266 45,727,214 RGD:9068941
G Pomp proteasome maturation protein JBrowse link NW_004955497 7,978,434 7,996,982 RGD:9068941
G Pou4f2 POU class 4 homeobox 2 JBrowse link NW_004955428 2,325,775 2,329,122 RGD:9068941
G Ppie peptidylprolyl isomerase E JBrowse link NW_004955452 17,242,255 17,256,776 RGD:9068941
G Ppig peptidylprolyl isomerase G JBrowse link NW_004955449 4,915,747 4,958,456 RGD:9068941
G Ppih peptidylprolyl isomerase H JBrowse link NW_004955537 2,211,566 2,229,444 RGD:9068941
G Ppp1r16b protein phosphatase 1 regulatory subunit 16B JBrowse link NW_004955445 17,864,103 17,961,295 RGD:9068941
G Ppp1r8 protein phosphatase 1 regulatory subunit 8 JBrowse link NW_004955452 7,022,114 7,042,770 RGD:9068941
G Ppp4r3a protein phosphatase 4 regulatory subunit 3A JBrowse link NW_004955438 13,731,900 13,769,189 RGD:9068941
G Ppp4r3b protein phosphatase 4 regulatory subunit 3B JBrowse link NW_004955424 27,461,919 27,520,649 RGD:9068941
G Pqbp1 polyglutamine binding protein 1 JBrowse link NW_004955543 430,324 434,205 RGD:9068941
G Prcc proline rich mitotic checkpoint control factor JBrowse link NW_004955545 2,846,116 2,878,247 RGD:9068941
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link NW_004955426 25,079,718 25,102,090 RGD:9068941
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 JBrowse link NW_004955464 2,996,608 3,062,197 RGD:9068941
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link NW_004955415 32,794,172 32,807,944 RGD:9068941
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link NW_004955439 18,664,230 19,953,358 RGD:9068941
G Prpf19 pre-mRNA processing factor 19 JBrowse link NW_004955511 5,546,212 5,552,368 RGD:9068941
G Prpf3 pre-mRNA processing factor 3 JBrowse link NW_004955413 429,259 455,449 RGD:9068941
G Prpf31 pre-mRNA processing factor 31 JBrowse link NW_004955604 125,489 136,209 RGD:9068941
G Prpf4 pre-mRNA processing factor 4 JBrowse link NW_004955419 14,190,146 14,206,086 RGD:9068941
G Prpf40a pre-mRNA processing factor 40 homolog A JBrowse link NW_004955440 18,083,838 18,128,701 RGD:9068941
G Prpf4b pre-mRNA processing factor 4B JBrowse link NW_004955465 9,359,634 9,392,913 RGD:9068941
G Rad54l2 RAD54 like 2 JBrowse link NW_004955532 3,177,655 3,271,683 RGD:9068941
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link NW_004955429 17,980,956 18,049,723 RGD:9068941
G Rbbp6 RB binding protein 6, ubiquitin ligase JBrowse link NW_004955493 3,003,522 3,034,638 RGD:9068941
G Rbm10 RNA binding motif protein 10 JBrowse link NW_004955516 904,852 934,313 RGD:9068941
G Rbm11 RNA binding motif protein 11 JBrowse link NW_004955407 16,071,186 16,082,332 RGD:9068941
G Rbm15 RNA binding motif protein 15 JBrowse link NW_004955435 13,846,297 13,854,639 RGD:9068941
G Rbm15b RNA binding motif protein 15B JBrowse link NW_004955532 3,080,207 3,082,312 RGD:9068941
G Rbm25 RNA binding motif protein 25 JBrowse link NW_004955523 2,213,766 2,270,417 RGD:9068941
G Rbm39 RNA binding motif protein 39 JBrowse link NW_004955422 25,719,771 25,755,757 RGD:9068941
G Rbm8a RNA binding motif protein 8A JBrowse link NW_004955568 164,050 166,162 RGD:9068941
G Rexo4 REX4 homolog, 3'-5' exonuclease JBrowse link NW_004955513 2,745,220 2,754,927 RGD:9068941
G Rfxap regulatory factor X associated protein JBrowse link NW_004955431 9,200,006 9,209,588 RGD:9068941
G Rmi2 RecQ mediated genome instability 2 JBrowse link NW_004955442 7,262,381 7,266,992 RGD:9068941
G Rreb1 ras responsive element binding protein 1 JBrowse link NW_004955465 6,572,593 6,757,423 RGD:9068941
G Rsrc1 arginine and serine rich coiled-coil 1 JBrowse link NW_004955448 8,947,553 9,249,465 RGD:9068941
G Rufy1 RUN and FYVE domain containing 1 JBrowse link NW_004955408 946,842 991,717 RGD:9068941
G S100pbp S100P binding protein JBrowse link NW_004955452 11,078,170 11,114,061 RGD:9068941
G Sap130 Sin3A associated protein 130 JBrowse link NW_004955459 2,529,373 2,602,864 RGD:9068941
G Sap18 Sin3A associated protein 18 JBrowse link NW_004955497 1,862,026 1,869,974 RGD:9068941
G Sarnp SAP domain containing ribonucleoprotein JBrowse link NW_004955458 3,396,443 3,451,193 RGD:9068941
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP JBrowse link NW_004955422 19,360,641 19,370,623 RGD:9068941
G Scnm1 sodium channel modifier 1 JBrowse link NW_004955588 526,986 529,774 RGD:9068941
G Sdcbp2 syndecan binding protein 2 JBrowse link NW_004955596 531,741 555,710 RGD:9068941
G Sde2 SDE2 telomere maintenance homolog JBrowse link NW_004955489 181,425 210,966 RGD:9068941
G Serpinb13 serpin family B member 13 JBrowse link NW_004955402 47,376,973 47,395,267 RGD:9068941
G Setd1a SET domain containing 1A, histone lysine methyltransferase JBrowse link NW_004955493 7,808,652 7,834,886 RGD:9068941
G Sf3a1 splicing factor 3a subunit 1 JBrowse link NW_004955455 4,579,153 4,601,942 RGD:9068941
G Sf3a2 splicing factor 3a subunit 2 JBrowse link NW_004955495 5,896,648 5,904,287 RGD:9068941
G Sf3a3 splicing factor 3a subunit 3 JBrowse link NW_004955452 15,691,729 15,715,782 RGD:9068941
G Sf3b1 splicing factor 3b subunit 1 JBrowse link NW_004955403 3,134,960 3,163,395 RGD:9068941
G Sf3b2 splicing factor 3b subunit 2 JBrowse link NW_004955422 19,242,041 19,266,479 RGD:9068941
G Sfmbt2 Scm like with four mbt domains 2 JBrowse link NW_004955421 23,691,648 23,913,781 RGD:9068941
G Sgk1 serum/glucocorticoid regulated kinase 1 JBrowse link NW_004955439 2,399,992 2,406,587 RGD:9068941
G Slc2a4rg SLC2A4 regulator JBrowse link NW_004955528 485,653 488,923 RGD:9068941
G Slc34a1 solute carrier family 34 member 1 JBrowse link NW_004955408 29,626,775 29,640,811 RGD:9068941
G Slu7 SLU7 homolog, splicing factor JBrowse link NW_004955408 14,268,958 14,288,114 RGD:9068941
G Smc4 structural maintenance of chromosomes 4 JBrowse link NW_004955448 10,926,653 10,960,624 RGD:9068941
G Smc5 structural maintenance of chromosomes 5 JBrowse link NW_004955434 2,742,276 2,848,384 RGD:9068941
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 JBrowse link NW_004955478 7,205,266 7,336,390 RGD:9068941
G Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 JBrowse link NW_004955452 9,759,452 9,793,105 RGD:9068941
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 JBrowse link NW_004955559 1,618,246 1,634,144 RGD:9068941
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' JBrowse link NW_004955416 28,166,885 28,178,404 RGD:9068941
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 JBrowse link NW_004955415 25,880,013 25,889,295 RGD:9068941
G Snurf SNRPN upstream reading frame JBrowse link NW_004955416 31,655,664 31,668,803 RGD:9068941
G Snw1 SNW domain containing 1 JBrowse link NW_004955438 1,561,562 1,601,492 RGD:9068941
G Son SON DNA and RNA binding protein JBrowse link NW_004955407 32,974,656 33,007,073 RGD:9068941
G Spop speckle type BTB/POZ protein JBrowse link NW_004955451 11,897,642 11,970,269 RGD:9068941
G Sprtn SprT-like N-terminal domain JBrowse link NW_004955492 7,463,228 7,476,683 RGD:9068941
G Srek1 splicing regulatory glutamic acid and lysine rich protein 1 JBrowse link NW_004955446 2,908,587 2,946,966 RGD:9068941
G Srpk1 SRSF protein kinase 1 JBrowse link NW_004955437 3,664,290 3,729,832 RGD:9068941
G Srpk2 SRSF protein kinase 2 JBrowse link NW_004955410 9,807,936 10,034,760 RGD:9068941
G Srrm1 serine and arginine repetitive matrix 1 JBrowse link NW_004955452 4,401,089 4,433,986 RGD:9068941
G Srrm2 serine/arginine repetitive matrix 2 JBrowse link NW_004955442 14,478,350 14,498,152 RGD:9068941
G Srsf1 serine and arginine rich splicing factor 1 JBrowse link NW_004955451 4,992,634 4,996,619 RGD:9068941
G Srsf10 serine and arginine rich splicing factor 10 JBrowse link NW_004955452 3,831,545 3,846,292 RGD:9068941
G Srsf11 serine and arginine rich splicing factor 11 JBrowse link NW_004955423 21,669,925 21,706,260 RGD:9068941
G Srsf2 serine and arginine rich splicing factor 2 JBrowse link NW_004955506 5,569,280 5,572,164 RGD:9068941
G Srsf3 serine and arginine rich splicing factor 3 JBrowse link NW_004955437 6,306,151 6,314,332 RGD:9068941
G Srsf4 serine and arginine rich splicing factor 4 JBrowse link NW_004955452 8,143,850 8,174,830 RGD:9068941
G Srsf5 serine and arginine rich splicing factor 5 JBrowse link NW_004955466 612,221 617,087 RGD:9068941
G Srsf6 serine and arginine rich splicing factor 6 JBrowse link NW_004955445 13,663,474 13,669,102 RGD:9068941
G Stk17a serine/threonine kinase 17a JBrowse link NW_004955460 288,335 307,033 RGD:9068941
G Stk19 serine/threonine kinase 19 JBrowse link NW_004955437 485,110 492,493 RGD:9068941
G Surf2 surfeit 2 JBrowse link NW_004955513 2,711,605 2,715,667 RGD:9068941
G Syf2 SYF2 pre-mRNA splicing factor JBrowse link NW_004955452 4,850,049 4,856,647 RGD:9068941
G Synpo2l synaptopodin 2 like JBrowse link NW_004955437 18,177,867 18,186,772 RGD:9068941
G Tab1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 JBrowse link NW_004955413 25,290,733 25,315,267 RGD:9068941
G Taf5l TATA-box binding protein associated factor 5 like JBrowse link NW_004955492 8,478,147 8,515,988 RGD:9068941
G Tap2 transporter 2, ATP binding cassette subfamily B member JBrowse link NW_004955437 1,480,217 1,499,032 RGD:9068941
G Tardbp TAR DNA binding protein JBrowse link NW_004955486 2,656,121 2,674,808 RGD:9068941
G Tbxa2r thromboxane A2 receptor JBrowse link NW_004955495 5,539,382 5,557,441 RGD:9068941
G Tcf12 transcription factor 12 JBrowse link NW_004955450 16,979,990 17,375,264 RGD:9068941
G Tcim transcriptional and immune response regulator JBrowse link NW_004955536 2,786,384 2,786,988 RGD:9068941
G Tepsin TEPSIN adaptor related protein complex 4 accessory protein JBrowse link NW_004955506 1,773,560 1,781,467 RGD:9068941
G Tert telomerase reverse transcriptase JBrowse link NW_004955504 649,248 669,796 RGD:9068941
G Tfip11 tuftelin interacting protein 11 JBrowse link NW_004955455 1,083,816 1,097,233 RGD:9068941
G Thap7 THAP domain containing 7 JBrowse link NW_004955442 19,311,307 19,313,779 RGD:9068941
G Thoc1 THO complex 1 JBrowse link NW_004955402 9,675,211 9,708,045 RGD:9068941
G Thoc6 THO complex 6 JBrowse link NW_004955442 14,314,100 14,317,726 RGD:9068941
G Thoc7 THO complex 7 JBrowse link NW_004955517 2,037,406 2,046,694 RGD:9068941
G Thrap3 thyroid hormone receptor associated protein 3 JBrowse link NW_004955452 14,233,155 14,282,521 RGD:9068941
G Timm50 translocase of inner mitochondrial membrane 50 JBrowse link NW_004955468 85,681 94,300 RGD:9068941
G Tkt transketolase JBrowse link NW_004955430 3,178,830 3,193,241 RGD:9068941
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase JBrowse link NW_004955472 3,073,090 3,076,607 RGD:9068941
G Trim69 tripartite motif containing 69 JBrowse link NW_004955409 8,376,449 8,394,651 RGD:9068941
G Trip11 thyroid hormone receptor interactor 11 JBrowse link NW_004955438 14,327,400 14,394,022 RGD:9068941
G Trip12 thyroid hormone receptor interactor 12 JBrowse link NW_004955453 5,132,776 5,272,250 RGD:9068941
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific JBrowse link NW_004955599 596,565 606,498 RGD:9068941
G U2af1 U2 small nuclear RNA auxiliary factor 1 JBrowse link NW_004955407 38,895,741 38,909,820 RGD:9068941
G U2af2 U2 small nuclear RNA auxiliary factor 2 JBrowse link NW_004955567 683,472 699,105 RGD:9068941
G Unc45a unc-45 myosin chaperone A JBrowse link NW_004955416 14,999,692 15,012,581 RGD:9068941
G Usp36 ubiquitin specific peptidase 36 JBrowse link NW_004955506 3,824,598 3,861,919 RGD:9068941
G Virma vir like m6A methyltransferase associated JBrowse link NW_004955417 10,690,128 10,759,808 RGD:9068941
G Vps72 vacuolar protein sorting 72 homolog JBrowse link NW_004955588 537,122 550,564 RGD:9068941
G Wbp11 WW domain binding protein 11 JBrowse link NW_004955413 11,533,303 11,549,067 RGD:9068941
G Wbp4 WW domain binding protein 4 JBrowse link NW_004955404 51,046,245 51,094,245 RGD:9068941
G Wrn WRN RecQ like helicase JBrowse link NW_004955463 7,495,243 7,633,532 RGD:9068941
G Wt1 WT1 transcription factor JBrowse link NW_004955476 10,464,688 10,504,473 RGD:9068941
G Wtap WT1 associated protein JBrowse link NW_004955439 21,149,970 21,174,479 RGD:9068941
G Ylpm1 YLP motif containing 1 JBrowse link NW_004955523 721,447 784,097 RGD:9068941
G Ythdc1 YTH domain containing 1 JBrowse link NW_004955447 4,474,920 4,505,359 RGD:9068941
G Zbtb16 zinc finger and BTB domain containing 16 JBrowse link NW_004955412 15,668,332 15,845,384 RGD:9068941
G Zbtb18 zinc finger and BTB domain containing 18 JBrowse link NW_004955406 7,364,080 7,372,038 RGD:9068941
G Zc3h13 zinc finger CCCH-type containing 13 JBrowse link NW_004955518 3,657,054 3,740,176 RGD:9068941
G Zc3h14 zinc finger CCCH-type containing 14 JBrowse link NW_004955438 11,173,849 11,223,700 RGD:9068941
G Zc3h18 zinc finger CCCH-type containing 18 JBrowse link NW_004955541 2,531,230 2,566,959 RGD:9068941
G Zcchc12 zinc finger CCHC-type containing 12 JBrowse link NW_004955534 1,131,585 1,133,382 RGD:9068941
G Znf217 zinc finger protein 217 JBrowse link NW_004955445 5,326,905 5,337,573 RGD:9068941
G Znf830 zinc finger protein 830 JBrowse link NW_004955481 9,661,791 9,663,326 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 11974
    cellular anatomical entity 11806
      nuclear body 676
        nuclear speck 314
          omega speckle 0
Path 2
Term Annotations click to browse term
  cellular_component 11974
    cellular anatomical entity 11806
      organelle 9272
        intracellular organelle 8817
          intracellular membrane-bounded organelle 7512
            nucleus 5157
              nuclear lumen 3465
                nucleoplasm 3012
                  nuclear body 676
                    nuclear speck 314
                      omega speckle 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.