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ONTOLOGY REPORT - ANNOTATIONS


Term:amino acid binding
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Accession:GO:0016597 term browser browse the term
Definition:Binding to an amino acid, organic acids containing one or more amino substituents.



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amino acid binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 enables IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:2040280 PMID:21873635 RGD:2302982 NCBI chr 5:76,288,780...76,343,262
Ensembl chr 5:76,288,782...76,343,207
JBrowse link
G AARS2 alanyl-tRNA synthetase 2, mitochondrial enables IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:12,706,043...12,718,821
Ensembl chr12:12,704,983...12,718,821
JBrowse link
G AGXT alanine--glyoxylate and serine--pyruvate aminotransferase enables ISO (PMID:18492492) RGD
UniProt
PMID:12383475 PMID:18492492 RGD:1599457 NCBI chr25:50,968,291...50,976,089 JBrowse link
G ASS1 argininosuccinate synthase 1 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904
JBrowse link
G CASR calcium sensing receptor enables IEA Ensembl GO_REF:0000107 NCBI chr33:25,340,822...25,432,814
Ensembl chr33:25,405,846...25,432,559
JBrowse link
G DDAH1 dimethylarginine dimethylaminohydrolase 1 enables IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:17322279 PMID:21873635 RGD:1625578 NCBI chr 6:62,548,852...62,683,687
Ensembl chr 6:62,549,152...62,683,729
JBrowse link
G DDAH2 dimethylarginine dimethylaminohydrolase 2 ISO RGD PMID:17322279 RGD:1625578 NCBI chr12:1,206,180...1,209,459
Ensembl chr12:1,206,309...1,208,389
JBrowse link
G DDC dopa decarboxylase ISO amino acid derivative, L-DOPA RGD PMID:10569946 RGD:4139897 NCBI chr18:1,802,239...1,876,714
Ensembl chr18:1,803,273...1,867,616
JBrowse link
G DPYS dihydropyrimidinase ISO RGD PMID:8307005 RGD:1624990 NCBI chr13:5,583,795...5,659,355
Ensembl chr13:5,583,801...5,659,463
JBrowse link
G FMO3 flavin containing dimethylaniline monoxygenase 3 ISO RGD PMID:17173378 RGD:1626480 NCBI chr 7:27,720,420...27,745,522
Ensembl chr 7:27,720,420...27,845,626
JBrowse link
G GCHFR GTP cyclohydrolase I feedback regulator ISO RGD PMID:11818540 RGD:2298660 NCBI chr30:7,900,691...7,904,330
Ensembl chr30:7,897,975...7,904,328
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO glutamine, fructose 6-phosphate RGD PMID:10898949 RGD:1625426 NCBI chr10:68,067,817...68,125,001
Ensembl chr10:68,073,062...68,125,007
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:14522984 RGD:1582383 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218
JBrowse link
G HDC histidine decarboxylase ISO RGD PMID:5898 PMID:4449071 PMID:7075603 PMID:9525922 PMID:12204113 More... RGD:2303726 RGD:2303727 RGD:2303728 RGD:2303733 RGD:2303734 RGD:2303735 NCBI chr30:16,201,222...16,223,452
Ensembl chr30:16,201,589...16,223,662
JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 ISO RGD PMID:10719243 PMID:11513477 RGD:2290190 RGD:2290543 NCBI chr16:25,391,759...25,407,161
Ensembl chr16:25,391,754...25,407,048
JBrowse link
G KARS1 lysyl-tRNA synthetase 1 ISO lysine RGD PMID:3988754 PMID:7082655 PMID:7372681 RGD:2303393 RGD:2303394 RGD:2303396 NCBI chr 5:75,172,976...75,188,197
Ensembl chr 5:75,173,032...75,188,197
JBrowse link
G LOC477562 proline dehydrogenase 1, mitochondrial ISO RGD PMID:8373828 RGD:1599203 NCBI chr26:29,039,007...29,059,722 JBrowse link
G MAT1A methionine adenosyltransferase 1A ISO methionine analog RGD PMID:10873471 PMID:12888348 RGD:1599916 RGD:7242772 NCBI chr 4:29,450,857...29,467,251
Ensembl chr 4:29,452,601...29,466,929
JBrowse link
G MAT2A methionine adenosyltransferase 2A ISO methionine RGD PMID:12029623 RGD:727376 NCBI chr17:39,525,635...39,532,512
Ensembl chr17:39,525,626...39,532,512
JBrowse link
G MTR 5-methyltetrahydrofolate-homocysteine methyltransferase ISO RGD PMID:11730351 RGD:1601423 NCBI chr 4:3,219,851...3,328,000
Ensembl chr 4:3,215,090...3,328,115
JBrowse link
G OTC ornithine transcarbamylase enables IEA
ISO
InterPro
RGD
PMID:2290837 GO_REF:0000002 RGD:1582378 NCBI chr  X:33,130,921...33,200,441
Ensembl chr  X:33,131,040...33,199,595
JBrowse link
G PAH phenylalanine hydroxylase ISO RGD PMID:16953590 RGD:1601531 NCBI chr15:41,590,253...41,670,156
Ensembl chr15:41,592,876...41,670,837
JBrowse link
G SCLY selenocysteine lyase enables ISO PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chr25:48,574,648...48,608,367
Ensembl chr25:48,574,130...48,632,035
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 ISO binds but cannot cleave; threonine is an inhibitor RGD PMID:3110140 RGD:2300383 NCBI chr 5:41,221,531...41,248,653
Ensembl chr 5:41,221,562...41,253,166
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 ISO binds but cannot cleave; threonine is an inhibitor RGD PMID:3110140 RGD:2300383 NCBI chr10:1,357,347...1,362,511
Ensembl chr10:1,356,706...1,362,305
JBrowse link
G SLC1A3 solute carrier family 1 member 3 enables ISO (MGI:65019|PMID:7903437) MGI PMID:7903437 MGI:65019 NCBI chr 4:71,936,128...72,014,119
Ensembl chr 4:71,936,126...72,014,173
JBrowse link
G TAT tyrosine aminotransferase ISO RGD PMID:12717026 RGD:1582407 NCBI chr 5:77,365,589...77,378,474
Ensembl chr 5:77,366,138...77,378,419
JBrowse link
G TDO2 tryptophan 2,3-dioxygenase ISO RGD PMID:3899109 PMID:7236232 PMID:10719243 RGD:2290190 RGD:2291804 RGD:2303721 NCBI chr15:53,406,110...53,424,260
Ensembl chr15:53,405,957...53,423,958
JBrowse link
G TH tyrosine hydroxylase ISO L-tyrosine RGD PMID:15639226 PMID:19489646 PMID:20025246 RGD:1580027 RGD:4139886 RGD:4139888 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602
JBrowse link
arginine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASTOR1 cytosolic arginine sensor for mTORC1 subunit 1 enables IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:23,439,472...23,443,950
Ensembl chr26:23,439,475...23,443,955
JBrowse link
G CASTOR2 cytosolic arginine sensor for mTORC1 subunit 2 NOT|enables ISO (PMID:26972053) UniProt PMID:26972053 NCBI chr 6:5,565,723...5,602,799
Ensembl chr 6:5,548,758...5,598,582
JBrowse link
G NAGS N-acetylglutamate synthase enables IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:19,344,073...19,349,395
Ensembl chr 9:19,344,902...19,349,207
JBrowse link
G NOS2 nitric oxide synthase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 9:42,171,821...42,210,217
Ensembl chr 9:42,171,821...42,208,588
JBrowse link
G NOS3 nitric oxide synthase 3 enables IEA Ensembl GO_REF:0000107 NCBI chr16:15,054,196...15,072,454
Ensembl chr16:15,011,344...15,072,277
JBrowse link
G PADI4 peptidyl arginine deiminase 4 enables ISO (PMID:15247907) CAFA PMID:15247907 NCBI chr 2:80,912,814...80,942,767
Ensembl chr 2:80,905,391...80,993,973
JBrowse link
G RARS1 arginyl-tRNA synthetase 1 ISO RGD PMID:7082655 RGD:2303394 NCBI chr 4:43,237,499...43,260,738
Ensembl chr 4:43,237,499...43,260,677
JBrowse link
G TM4SF5 transmembrane 4 L six family member 5 enables ISO (PMID:30956113) UniProt PMID:30956113 NCBI chr 5:31,788,528...31,796,013
Ensembl chr 5:31,788,528...31,795,956
JBrowse link
glutamate binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP104 centrosomal protein 104 ISO RGD PMID:7488117 RGD:1299480 NCBI chr 5:58,301,767...58,339,920
Ensembl chr 5:58,305,589...58,335,438
JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 ISO RGD PMID:8663466 RGD:4144107 NCBI chr37:18,308,164...18,428,487
Ensembl chr37:18,143,986...18,427,697
JBrowse link
G GAD1 glutamate decarboxylase 1 ISO RGD PMID:10812196 RGD:6480261 NCBI chr36:15,351,289...15,391,701
Ensembl chr36:15,349,683...15,391,824
JBrowse link
G GAD2 glutamate decarboxylase 2 ISO RGD PMID:10812196 RGD:6480261 NCBI chr 2:7,365,708...7,450,893
Ensembl chr 2:7,365,283...7,450,893
JBrowse link
G GCLC glutamate-cysteine ligase catalytic subunit enables IEA Ensembl GO_REF:0000107 NCBI chr12:20,999,815...21,047,779
Ensembl chr12:21,000,792...21,047,779
JBrowse link
G GLUL glutamate-ammonia ligase ISO RGD PMID:28323 PMID:4403443 RGD:2301547 RGD:2301548 NCBI chr 7:15,730,898...15,740,241
Ensembl chr 7:15,730,898...15,740,241
JBrowse link
G GRIK1 glutamate ionotropic receptor kainate type subunit 1 ISO RGD PMID:12533604 PMID:16540562 RGD:1642470 RGD:1642497 NCBI chr31:24,477,319...24,839,502
Ensembl chr31:24,478,696...24,839,434
JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 enables ISO PMID:8011339
(PMID:7685113)
UniProt PMID:7685113 PMID:8011339 RGD:8553919 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050
JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A enables ISO PMID:9425000 RGD
UniProt
PMID:9425000 PMID:22098737 RGD:7241434 RGD:8554578 NCBI chr 6:32,132,070...32,678,319
Ensembl chr 6:32,303,121...32,668,960
JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B enables ISS UniProt GO_REF:0000024 NCBI chr27:32,470,889...32,883,606
Ensembl chr27:32,471,153...32,877,680
JBrowse link
G GRIN2D glutamate ionotropic receptor NMDA type subunit 2D ISO RGD PMID:15107472 RGD:1642397 NCBI chr 1:107,821,853...107,853,411
Ensembl chr 1:107,822,716...107,849,945
JBrowse link
G GRM7 glutamate metabotropic receptor 7 enables ISO (PMID:9144652)
L-2-amino-4-phosphonobutyrate (L-AP4), glutamate analogue
RGD
UniProt
PMID:9144652 PMID:11825890 PMID:12692128 PMID:17620729 RGD:2289010 RGD:2289012 RGD:728749 NCBI chr20:10,230,568...11,058,693
Ensembl chr20:10,230,557...11,058,703
JBrowse link
G SLC1A1 solute carrier family 1 member 1 ISO RGD PMID:16128593 RGD:1599319 NCBI chr 1:92,898,274...92,978,260
Ensembl chr 1:92,898,274...92,978,260
JBrowse link
G SLC1A3 solute carrier family 1 member 3 enables IEA Ensembl GO_REF:0000107 NCBI chr 4:71,936,128...72,014,119
Ensembl chr 4:71,936,126...72,014,173
JBrowse link
glycine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CEP104 centrosomal protein 104 ISO RGD PMID:7488117 RGD:1299480 NCBI chr 5:58,301,767...58,339,920
Ensembl chr 5:58,305,589...58,335,438
JBrowse link
G GLDC glycine decarboxylase enables IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:6778858 PMID:21873635 RGD:1642728 NCBI chr11:27,491,639...27,584,450
Ensembl chr11:27,414,834...27,584,450
JBrowse link
G GLRA1 glycine receptor alpha 1 enables ISO (PMID:15748848), (PMID:2155780), (PMID:7920629), (PMID:8717357)
(MGI:69496|PMID:7874121)
(MGI:1096078|PMID:9145798)
(MGI:68467|PMID:8062927)
RGD
UniProt
MGI
PMID:2155780 PMID:7874121 PMID:7920629 PMID:8062927 PMID:8717357 More... MGI:1096078 MGI:68467 MGI:69496 RGD:1598572 NCBI chr 4:57,443,094...57,541,494
Ensembl chr 4:57,443,999...57,528,376
JBrowse link
G GLRA2 glycine receptor alpha 2 enables ISO (PMID:2155780) UniProt PMID:2155780 NCBI chr  X:10,859,699...11,033,386
Ensembl chr  X:10,860,476...11,033,287
JBrowse link
G GLRB glycine receptor beta contributes_to
enables
ISO (PMID:15748848)
(MGI:55288|PMID:6285205), (MGI:56245|PMID:2983837)
RGD
UniProtKB
MGI
PMID:2983837 PMID:6285205 PMID:15574743 PMID:15748848 MGI:55288 MGI:56245 RGD:1598572 NCBI chr15:54,429,131...54,519,844
Ensembl chr15:54,429,765...54,518,456
JBrowse link
G GNMT glycine N-methyltransferase enables ISO (PMID:15340920)
PMID:10756111
(MGI:3852308|PMID:15340920)
UniProt
CAFA
PMID:10756111 PMID:15340920 MGI:3852308 RGD:12793006 RGD:8553948 NCBI chr12:11,500,363...11,503,075
Ensembl chr12:11,500,392...11,503,481
JBrowse link
G GRIN1 glutamate ionotropic receptor NMDA type subunit 1 enables ISS
ISO
UniProt
RGD
PMID:22098737 GO_REF:0000024 RGD:7241434 NCBI chr 9:48,492,967...48,513,981
Ensembl chr 9:48,493,287...48,509,050
JBrowse link
G GRIN2B glutamate ionotropic receptor NMDA type subunit 2B enables IEA Ensembl GO_REF:0000107 NCBI chr27:32,470,889...32,883,606
Ensembl chr27:32,471,153...32,877,680
JBrowse link
G GRIN3A glutamate ionotropic receptor NMDA type subunit 3A enables ISO PMID:17182766
(PMID:17320117)
UniProt PMID:17182766 PMID:17320117 RGD:8553928 NCBI chr11:58,271,808...58,421,887
Ensembl chr11:58,273,377...58,421,761
JBrowse link
G GRIN3B glutamate ionotropic receptor NMDA type subunit 3B ISO RGD PMID:11823786 RGD:632842 NCBI chr20:57,703,569...57,710,119 JBrowse link
G GSS glutathione synthetase ISO RGD PMID:10964706 RGD:1599340 NCBI chr24:23,973,807...24,000,281
Ensembl chr24:23,901,045...23,997,286
JBrowse link
L-DOPA binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPR143 G protein-coupled receptor 143 enables ISO (PMID:18828673) UniProt PMID:18828673 NCBI chr  X:6,438,068...6,479,731
Ensembl chr  X:6,437,660...6,474,447
JBrowse link
leucine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLUD1 glutamate dehydrogenase 1 enables ISO (PMID:12742085) BHF-UCL PMID:12742085 NCBI chr 4:34,629,046...34,662,711 JBrowse link
G SESN1 sestrin 1 enables IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:65,958,995...66,057,369
Ensembl chr12:65,960,066...66,057,035
JBrowse link
G SESN2 sestrin 2 enables IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:72,151,464...72,168,861
Ensembl chr 2:72,151,868...72,168,492
JBrowse link
G SESN3 sestrin 3 enables IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:5,827,957...5,899,540
Ensembl chr21:5,777,780...5,892,805
JBrowse link
G UBR1 ubiquitin protein ligase E3 component n-recognin 1 enables IEA Ensembl GO_REF:0000107 NCBI chr30:9,869,769...10,006,994
Ensembl chr30:9,870,021...10,006,947
JBrowse link
G UBR2 ubiquitin protein ligase E3 component n-recognin 2 enables IEA Ensembl GO_REF:0000107 NCBI chr12:11,167,286...11,296,817
Ensembl chr12:11,167,346...11,294,911
JBrowse link
serine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRM7 glutamate metabotropic receptor 7 enables ISO (PMID:9144652) UniProt PMID:9144652 NCBI chr20:10,230,568...11,058,693
Ensembl chr20:10,230,557...11,058,703
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 enables IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:41,221,531...41,248,653
Ensembl chr 5:41,221,562...41,253,166
JBrowse link
G THNSL2 threonine synthase like 2 enables ISO (MGI:3690523|PMID:17034760) BHF-UCL PMID:17034760 MGI:3690523 NCBI chr17:38,196,605...38,212,624
Ensembl chr17:38,191,494...38,212,809
JBrowse link
tyrosine binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPR143 G protein-coupled receptor 143 enables ISO (PMID:18828673) UniProt PMID:18828673 NCBI chr  X:6,438,068...6,479,731
Ensembl chr  X:6,437,660...6,474,447
JBrowse link
G YARS2 tyrosyl-tRNA synthetase 2 enables IEA Ensembl GO_REF:0000107 NCBI chr27:16,139,462...16,162,701
Ensembl chr27:16,139,499...16,161,147
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 15400
    binding 14467
      small molecule binding 1513
        organic acid binding 137
          amino acid binding 67
            3-sulfino-L-alanine binding 0
            L-DOPA binding 1
            L-cysteine binding 0
            arginine binding 8
            aspartate binding 0
            glutamate binding 14
            glycine binding 11
            leucine binding 6
            proline binding 0
            serine binding 3
            tryptophan binding + 0
            tyrosine binding + 2
paths to the root