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ONTOLOGY REPORT - ANNOTATIONS


Term:Cdc73/Paf1 complex
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Accession:GO:0016593 term browser browse the term
Definition:A multiprotein complex that associates with RNA polymerase II and general RNA polymerase II transcription factor complexes and may be involved in both transcriptional initiation and elongation. In Saccharomyces the complex contains Paf1p, Cdc73p, Ctr9p, Rtf1p, and Leo1p.
Synonyms:exact_synonym: Paf1 complex;   Paf1p complex



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Cdc73/Paf1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc73 cell division cycle 73 part_of ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000107
PMID:21873635
(PMID:16307923), (PMID:18987311), (PMID:20178742)
UniProt
Ensembl
RGD
PMID:16307923 PMID:18987311 PMID:20178742 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr13:55,357,226...55,449,690
Ensembl chr13:55,357,226...55,449,656
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component part_of ISO
IBA
(PMID:16307923), (PMID:20178742)
PMID:21873635
UniProtKB:Q8JZM7 (MGI:6203683|PMID:27749823)
RGD PMID:16307923 PMID:20178742 PMID:27749823 PMID:21873635 MGI:6203683, RGD:13792537 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component part_of ISS
ISO
GO_REF:0000024
(PMID:16307923), (PMID:18987311), (PMID:20178742)
UniProt
RGD
PMID:16307923 PMID:18987311 PMID:20178742 GO_REF:0000024 NCBI chr 8:76,199,547...76,223,983
Ensembl chr 8:76,199,099...76,223,983
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component part_of ISS
ISO
IBA
GO_REF:0000024
UniProtKB:Q8JZM7 (MGI:6203683|PMID:27749823)
(PMID:16307923), (PMID:20178742)
PMID:21873635
UniProt
RGD
PMID:16307923 PMID:20178742 PMID:27749823 PMID:21873635 GO_REF:0000024 MGI:6203683, RGD:13792537 NCBI chr 1:83,683,654...83,689,233
Ensembl chr 1:83,668,813...83,689,237
JBrowse link
G Pex2 peroxisomal biogenesis factor 2 part_of ISO (PMID:18987311) RGD PMID:18987311 NCBI chr 2:96,050,380...96,072,928
Ensembl chr 2:96,045,958...96,073,404
JBrowse link
G Rtf1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) part_of IBA
ISO
PMID:21873635
UniProtKB:Q8JZM7 (MGI:6203683|PMID:27749823)
(PMID:20178742)
RGD PMID:20178742 PMID:27749823 PMID:21873635 MGI:6203683, RGD:13792537 NCBI chr 3:106,659,363...106,718,970
Ensembl chr 3:106,659,308...106,718,970
JBrowse link
G Setd5 SET domain containing 5 part_of ISO (MGI:5812827|PMID:27864380) RGD PMID:27864380 MGI:5812827 NCBI chr 4:146,217,172...146,294,896
Ensembl chr 4:146,217,180...146,294,894
JBrowse link
G Wdr61 WD repeat domain 61 part_of ISO
IEA
IBA
ISS
(PMID:20178742)
GO_REF:0000107
PMID:21873635
UniProtKB:Q8JZM7 (MGI:6203683|PMID:27749823)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20178742 PMID:27749823 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:6203683, RGD:13792537 NCBI chr 8:55,103,542...55,120,837
Ensembl chr 8:55,103,545...55,120,813
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20009
    cellular anatomical entity 19717
      nucleoplasm 3482
        RNA polymerase II, holoenzyme 79
          Cdc73/Paf1 complex 8
Path 2
Term Annotations click to browse term
  cellular_component 20009
    cellular anatomical entity 19717
      organelle 13110
        membrane-bounded organelle 11717
          intracellular membrane-bounded organelle 11240
            nucleus 7066
              nuclear lumen 3949
                nucleoplasm 3482
                  transcription elongation factor complex 67
                    Cdc73/Paf1 complex 8
paths to the root