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ONTOLOGY REPORT - ANNOTATIONS


Term:obsolete nucleosome positioning
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Accession:GO:0016584 term browser browse the term
Status:
This term is obsolete. We suggest searching for the text of the ontology term or for a keyword rather than searching for the ontology ID. For more information, please contact us.
Definition:OBSOLETE. Ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.
Comment:This term was obsoleted because it represents a molecular function.
Synonyms:exact_synonym: nucleosome spacing
 consider: GO:0140658;   GO:0140750;   GO:0140751



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obsolete nucleosome positioning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baz1a bromodomain adjacent to zinc finger domain, 1A involved_in ISO (PMID:17099699) RGD PMID:17099699 NCBI chr 6:72,389,701...72,512,516
Ensembl chr 6:72,389,703...72,512,459
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain, 1B involved_in ISO (MGI:2179578|PMID:11980720) RGD PMID:11980720 MGI:2179578 NCBI chr12:21,431,985...21,489,956
Ensembl chr12:21,431,985...21,490,426
JBrowse link
G Ctcf CCCTC-binding factor involved_in ISO (PMID:18654629) RGD PMID:18654629 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G H1f2 H1.2 linker histone, cluster member acts_upstream_of_or_within ISO MGI:2665852 (MGI:2664444|PMID:12808097) RGD PMID:12808097 MGI:2664444 NCBI chr17:41,391,106...41,392,611
Ensembl chr17:41,388,477...41,392,635
JBrowse link
G H1f4 H1.4 linker histone, cluster member acts_upstream_of_or_within ISO MGI:2665857 (MGI:2664444|PMID:12808097) RGD PMID:12808097 MGI:2664444 NCBI chr17:41,486,634...41,487,293
Ensembl chr17:41,486,560...41,487,403
JBrowse link
G H1f8 H1.8 linker histone involved_in ISO (MGI:5559660|PMID:22868987) RGD PMID:22868987 MGI:5559660 NCBI chr 4:148,993,133...148,998,254
Ensembl chr 4:148,993,133...148,998,254
JBrowse link
G H4f3 H1.3 linker histone, cluster member acts_upstream_of_or_within ISO MGI:2666743 (MGI:2664444|PMID:12808097) RGD PMID:12808097 MGI:2664444 NCBI chr17:41,528,576...41,554,586
Ensembl chr17:41,529,667...41,552,334
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:22046413) RGD PMID:22046413 NCBI chr 1:83,683,654...83,689,233
Ensembl chr 1:83,668,813...83,689,237
JBrowse link
G Prdm9 PR/SET domain 9 involved_in ISO (PMID:29072575) RGD PMID:29072575 NCBI chr 1:56,505,579...56,525,726
Ensembl chr 1:56,505,579...56,525,652
JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO (PMID:12972596), (PMID:9836642) RGD PMID:9836642 PMID:12972596 NCBI chr 1:151,892,055...152,015,089
Ensembl chr 1:151,892,434...152,009,051
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:12972596), (PMID:17099699), (PMID:9836642)
(MGI:2179578|PMID:11980720)
RGD PMID:9836642 PMID:11980720 PMID:12972596 PMID:17099699 MGI:2179578 NCBI chr19:27,271,918...27,304,594
Ensembl chr19:27,271,148...27,304,594
JBrowse link

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