ONTOLOGY REPORT - ANNOTATIONS
Term: sarcoplasmic reticulum
Accession: GO:0016529
browse the term
Definition: A fine reticular network of membrane-limited elements that pervades the sarcoplasm of a muscle cell; continuous over large portions of the cell and with the nuclear envelope; that part of the endoplasmic reticulum specialized for calcium release, uptake and storage.
Comment: See also the cellular component terms 'sarcoplasm ; GO:0016528', 'nuclear envelope ; GO:0005635' and 'endoplasmic reticulum ; GO:0005783'.
Synonyms: alt_id: GO:0008221
xref: Wikipedia:Endoplasmic_reticulum#Sarcoplasmic_reticulum
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Agl
amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
ISO
RGD
PMID:15180797
RGD:1642741
NCBI chrNW_004955435:4,622,142...4,684,439
Ensembl chrNW_004955435:4,621,991...4,688,139
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Akap6
A-kinase anchoring protein 6
located_in
ISO
PMID:7721854 (PMID:10830164), (PMID:7721854)
RGD MGI BHF-UCL
PMID:7721854 PMID:10830164
RGD:6902944
NCBI chrNW_004955409:28,067,814...28,516,881
Ensembl chrNW_004955409:28,077,621...28,516,944
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Akap7
A-kinase anchoring protein 7
ISO
RGD
PMID:17901878
RGD:2312630
NCBI chrNW_004955436:11,883,840...12,002,668
Ensembl chrNW_004955436:11,884,433...12,004,013
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Akt2
AKT serine/threonine kinase 2
ISO
MMO:0000662
RGD
PMID:29676955
RGD:13703029
NCBI chrNW_004955578:950,258...1,004,438
Ensembl chrNW_004955578:967,593...1,004,438
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Ank1
ankyrin 1
ISO
RGD
PMID:9024692 PMID:12631729
RGD:11251703 RGD:633514
NCBI chrNW_004955536:1,049,325...1,237,943
Ensembl chrNW_004955536:1,049,407...1,237,943
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Ank3
ankyrin 3
ISO
RGD
PMID:9664041
RGD:631996
NCBI chrNW_004955425:13,522,233...13,851,286
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Atp2a1
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1
located_in
ISO
(MGI:2153332|PMID:11784029)
RGD MGI
PMID:8447366 PMID:11784029 PMID:12409282 PMID:19029185
MGI:2153332 RGD:2313265 RGD:7241223 RGD:724593
NCBI chrNW_004955493:6,559,995...6,578,461
Ensembl chrNW_004955493:6,559,995...6,578,461
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Atp2a2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2
located_in
ISO
(MGI:5314827|PMID:22355118), (MGI:85770|PMID:9038922) (PMID:12804600), (PMID:16402920)
RGD MGI UniProt
PMID:8447366 PMID:9038922 PMID:12409282 PMID:12804600 PMID:16402920 PMID:17901878 PMID:22355118 More...
MGI:5314827 MGI:85770 RGD:2312630 RGD:7241223 RGD:724593
NCBI chrNW_004955482:7,233,336...7,295,754
Ensembl chrNW_004955482:7,233,336...7,295,754
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Atp2a3
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3
located_in
ISO
(PMID:8809064)
UniProt
PMID:8809064
NCBI chrNW_004955467:12,911,679...12,941,322
Ensembl chrNW_004955467:12,911,679...12,941,924
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Ca4
carbonic anhydrase 4
ISO
RGD
PMID:8911968
RGD:1600749
NCBI chrNW_004955451:1,485,939...1,493,249
Ensembl chrNW_004955451:1,486,010...1,494,084
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Cacna1s
calcium voltage-gated channel subunit alpha1 S
located_in
ISO
(MGI:3028707|PMID:12954602), (MGI:3529615|PMID:15536090), (MGI:3612722|PMID:16403451), (MGI:84458|PMID:8943043)
MGI
PMID:8943043 PMID:12954602 PMID:15536090 PMID:16403451
MGI:3028707 MGI:3529615 MGI:3612722 MGI:84458
NCBI chrNW_004955406:37,201,180...37,263,328
Ensembl chrNW_004955406:37,201,180...37,263,371
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Cacna2d1
calcium voltage-gated channel auxiliary subunit alpha2delta 1
located_in
ISO
(MGI:3529615|PMID:15536090)
MGI
PMID:15536090
MGI:3529615
NCBI chrNW_004955410:3,544,398...3,963,582
Ensembl chrNW_004955410:3,619,740...3,964,239
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Cacnb1
calcium voltage-gated channel auxiliary subunit beta 1
located_in
ISO
(MGI:84458|PMID:8943043)
MGI
PMID:8943043
MGI:84458
NCBI chrNW_004955451:14,041,848...14,059,740
Ensembl chrNW_004955451:14,038,668...14,059,848
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Calr
calreticulin
ISO
RGD
PMID:8600158
RGD:2313254
NCBI chrNW_004955415:31,985,147...31,989,372
Ensembl chrNW_004955415:31,985,147...31,989,372
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Camk2d
calcium/calmodulin dependent protein kinase II delta
located_in
ISO
(MGI:5466245|PMID:21998325)
MGI
PMID:21998325
MGI:5466245
NCBI chrNW_004955428:25,583,501...25,880,395
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Casq1
calsequestrin 1
located_in
ISO
(MGI:2449410|PMID:12419813), (MGI:3037390|PMID:14728599), (MGI:5582187|PMID:7945294)
RGD MGI
PMID:7945294 PMID:12419813 PMID:14728599 PMID:19029185
MGI:2449410 MGI:3037390 MGI:5582187 RGD:2313265
NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836
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Casq2
calsequestrin 2
located_in
ISO
(PMID:9287354)
RGD BHF-UCL
PMID:9287354 PMID:17569730
RGD:2314601
NCBI chrNW_004955435:18,941,975...18,996,027
Ensembl chrNW_004955435:18,941,936...18,996,200
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Ccdc78
coiled-coil domain containing 78
located_in
ISO
(PMID:22818856)
UniProt
PMID:22818856
NCBI chrNW_004955442:16,478,219...16,482,452
Ensembl chrNW_004955442:16,478,795...16,482,263
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Fabp3
fatty acid binding protein 3
NOT
ISO
RGD
PMID:2032944
RGD:1582411
NCBI chrNW_004955452:9,851,182...9,858,735
Ensembl chrNW_004955452:9,846,689...9,861,971
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Fkbp1b
FKBP prolyl isomerase 1B
located_in
ISO
(MGI:5007884|PMID:19578067), (MGI:5288113|PMID:21788490)
MGI
PMID:19578067 PMID:21788490
MGI:5007884 MGI:5288113
NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767
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H6pd
hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase
is_active_in
ISO
(MGI:3793398|PMID:18222920)
MGI
PMID:18222920
MGI:3793398
NCBI chrNW_004955486:4,088,354...4,115,077
Ensembl chrNW_004955486:4,022,306...4,115,077
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Hax1
HCLS1 associated protein X-1
part_of
ISO
PMID:19920172 (MGI:4414726|PMID:19920172)
CACAO
PMID:19920172
MGI:4414726 RGD:10047287
NCBI chrNW_004955545:816,789...819,667
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Hk2
hexokinase 2
ISO
MMO:0000662
RGD
PMID:29676955
RGD:13703029
NCBI chrNW_004955424:10,897,528...10,966,025
Ensembl chrNW_004955424:10,897,485...10,966,025
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Itpr2
inositol 1,4,5-trisphosphate receptor type 2
located_in
ISO
(MGI:3583849|PMID:16014380)
RGD MGI
PMID:16014380
MGI:3583849 RGD:7175269
NCBI chrNW_004955413:21,289,673...21,719,610
Ensembl chrNW_004955413:21,291,110...21,719,303
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Jph1
junctophilin 1
located_in
ISO
(MGI:1861885|PMID:10949023)
UniProt
PMID:10949023
MGI:1861885
NCBI chrNW_004955444:6,108,312...6,176,430
Ensembl chrNW_004955444:6,108,312...6,176,814
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Jph2
junctophilin 2
located_in
ISO
(MGI:1861885|PMID:10949023)
MGI
PMID:10949023
MGI:1861885
NCBI chrNW_004955445:13,117,312...13,190,061
Ensembl chrNW_004955445:13,118,717...13,187,235
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Jsrp1
junctional sarcoplasmic reticulum protein 1
located_in
ISO
(MGI:2677582|PMID:12871958)
MGI
PMID:12871958
MGI:2677582
NCBI chrNW_004955495:5,886,008...5,893,227
Ensembl chrNW_004955495:5,890,226...5,893,135
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Nol3
nucleolar protein 3
located_in
ISO
PMID:23382383
UniProt
PMID:23382383
RGD:10047354
NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095
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Nos1
nitric oxide synthase 1
located_in
ISO
(PMID:9892689)
BHF-UCL
PMID:9892689
NCBI chrNW_004955455:13,797,557...13,978,402
Ensembl chrNW_004955455:13,797,545...13,972,566
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Pln
phospholamban
located_in
ISO
(MGI:85770|PMID:9038922)
RGD MGI
PMID:9038922 PMID:12403631 PMID:17901878
MGI:85770 RGD:2312630 RGD:633528
NCBI chrNW_004955436:1,439,098...1,447,070
Ensembl chrNW_004955436:1,439,098...1,447,070
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Pomt1
protein O-mannosyltransferase 1
located_in
ISO
(MGI:3709220|PMID:17456771)
MGI
PMID:17456771
MGI:3709220
NCBI chrNW_004955513:1,189,169...1,203,933
Ensembl chrNW_004955513:1,189,169...1,203,933
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Pygm
glycogen phosphorylase, muscle associated
ISO
RGD
PMID:11692172 PMID:12967914
RGD:1599897 RGD:1599989
NCBI chrNW_004955422:20,411,480...20,424,676
Ensembl chrNW_004955422:20,411,480...20,424,931
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Rasd1
ras related dexamethasone induced 1
located_in
ISO
(MGI:5613473|PMID:19800018)
BHF-UCL
PMID:19800018
MGI:5613473
NCBI chrNW_004955577:452,993...454,659
Ensembl chrNW_004955577:452,993...454,713
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Ryr1
ryanodine receptor 1
located_in
ISO
(MGI:2153332|PMID:11784029), (MGI:3028707|PMID:12954602), (MGI:3529615|PMID:15536090), (MGI:70290|PMID:7832748), (MGI:84458|PMID:8943043)
RGD MGI
PMID:7832748 PMID:8943043 PMID:11784029 PMID:12954602 PMID:15536090 PMID:19230144 More...
MGI:2153332 MGI:3028707 MGI:3529615 MGI:70290 MGI:84458 RGD:7175256
NCBI chrNW_004955468:879,807...1,000,118
Ensembl chrNW_004955468:879,951...1,000,036
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Ryr2
ryanodine receptor 2
located_in
ISO
(MGI:5288113|PMID:21788490), (MGI:5431202|PMID:22406107), (MGI:5486563|PMID:12919952) PMID:11590243 (PMID:10830164), (PMID:12919952)
RGD BHF-UCL
PMID:10830164 PMID:11590243 PMID:12919952 PMID:21788490 PMID:21807619 PMID:22406107 More...
MGI:5288113 MGI:5431202 MGI:5486563 RGD:1599255 RGD:7175254
NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
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S100a1
S100 calcium binding protein A1
located_in
ISO
(PMID:12804600) (MGI:2664619|PMID:12804600)
UniProt MGI
PMID:12804600
MGI:2664619
NCBI chrNW_004955545:276,868...281,015
Ensembl chrNW_004955545:276,868...281,015
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Sar1a
secretion associated Ras related GTPase 1A
located_in
ISO
(MGI:3037390|PMID:14728599)
MGI
PMID:14728599
MGI:3037390
NCBI chrNW_004955437:21,075,632...21,093,608
Ensembl chrNW_004955437:21,074,930...21,093,608
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Sgcd
sarcoglycan delta
located_in
ISO
(MGI:3612722|PMID:16403451), (MGI:4835364|PMID:19931597)
MGI
PMID:16403451 PMID:19931597
MGI:3612722 MGI:4835364
NCBI chrNW_004955408:10,273,344...10,820,108
Ensembl chrNW_004955408:10,273,223...10,819,072
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Slc2a4
solute carrier family 2 member 4
ISO
MMO:0000662
RGD
PMID:29676955
RGD:13703029
NCBI chrNW_004955467:9,630,304...9,636,005
Ensembl chrNW_004955467:9,630,304...9,636,005
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Sln
sarcolipin
located_in
ISO
(PMID:9575189)
UniProt
PMID:9575189
NCBI chrNW_004955412:10,057,481...10,062,178
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Syne2
spectrin repeat containing nuclear envelope protein 2
located_in
ISO
(PMID:15671068)
UniProt
PMID:15671068
NCBI chrNW_004955466:5,646,516...5,926,382
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Thbs1
thrombospondin 1
located_in
ISO
(MGI:5431143|PMID:22682248)
UniProt
PMID:22682248
MGI:5431143
NCBI chrNW_004955416:6,490,034...6,506,419
Ensembl chrNW_004955416:6,489,451...6,506,419
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Thbs4
thrombospondin 4
located_in
ISO
(MGI:5431143|PMID:22682248)
UniProt
PMID:22682248
MGI:5431143
NCBI chrNW_004955425:21,072,873...21,117,061
Ensembl chrNW_004955425:21,069,855...21,117,061
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Tmem38a
transmembrane protein 38A
located_in
ISO
(MGI:3715564|PMID:17611541)
MGI
PMID:17611541
MGI:3715564
NCBI chrNW_004955524:1,132,111...1,144,335
Ensembl chrNW_004955524:1,132,111...1,144,380
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Trdn
triadin
located_in
ISO
(PMID:9287354)
RGD BHF-UCL
PMID:9287354 PMID:21811790
RGD:7327228
NCBI chrNW_004955436:4,963,945...5,266,727
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Akap6
A-kinase anchoring protein 6
located_in
ISO
PMID:12709444
BHF-UCL
PMID:12709444
RGD:8554839
NCBI chrNW_004955409:28,067,814...28,516,881
Ensembl chrNW_004955409:28,077,621...28,516,944
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Asph
aspartate beta-hydroxylase
located_in
ISO
(PMID:8530521)
UniProt
PMID:8530521
NCBI chrNW_004955444:17,116,060...17,320,966
Ensembl chrNW_004955444:17,121,559...17,318,295
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Jph1
junctophilin 1
located_in
ISO
(MGI:1861885|PMID:10949023)
UniProt
PMID:10949023
MGI:1861885
NCBI chrNW_004955444:6,108,312...6,176,430
Ensembl chrNW_004955444:6,108,312...6,176,814
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Reep5
receptor accessory protein 5
located_in
ISO
(MGI:6401630|PMID:32075961)
UniProt
PMID:32075961
MGI:6401630
NCBI chrNW_004955418:2,504,028...2,539,574
Ensembl chrNW_004955418:2,502,674...2,536,817
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Trdn
triadin
located_in
ISO
PMID:22505613
RGD BHF-UCL
PMID:7565919 PMID:22505613
RGD:2314606 RGD:7327226
NCBI chrNW_004955436:4,963,945...5,266,727
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Atp2a2
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2
located_in
ISO
(PMID:16402920)
BHF-UCL
PMID:16402920
NCBI chrNW_004955482:7,233,336...7,295,754
Ensembl chrNW_004955482:7,233,336...7,295,754
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Dhrs7c
dehydrogenase/reductase 7C
located_in
ISO
(MGI:5306721|PMID:21995425)
MGI
PMID:21995425
MGI:5306721
NCBI chrNW_004955467:7,330,267...7,341,897
Ensembl chrNW_004955467:7,330,188...7,342,053
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Casq1
calsequestrin 1
located_in
ISO
(MGI:3625212|PMID:16600288), (MGI:5306707|PMID:22049211)
UniProt
PMID:16600288 PMID:22049211
MGI:3625212 MGI:5306707
NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836
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Casq2
calsequestrin 2
located_in
ISO
(MGI:4453101|PMID:19920148)
UniProt
PMID:19920148
MGI:4453101
NCBI chrNW_004955435:18,941,975...18,996,027
Ensembl chrNW_004955435:18,941,936...18,996,200
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Atp2a1
ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1
located_in
ISO
(MGI:5614883|PMID:25640239), (MGI:5751610|PMID:26816378)
UniProt
PMID:25640239 PMID:26816378
MGI:5614883 MGI:5751610
NCBI chrNW_004955493:6,559,995...6,578,461
Ensembl chrNW_004955493:6,559,995...6,578,461
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Cherp
calcium homeostasis endoplasmic reticulum protein
located_in
ISO
PMID:21454501
UniProt
PMID:21454501
RGD:8554079
NCBI chrNW_004955524:1,224,698...1,235,192
Ensembl chrNW_004955524:1,224,897...1,234,758
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Dhrs7c
dehydrogenase/reductase 7C
located_in
ISO
(MGI:5306721|PMID:21995425), (MGI:6810289|PMID:27806939), (MGI:6814709|PMID:22143674)
UniProt
PMID:21995425 PMID:22143674 PMID:27806939
MGI:5306721 MGI:6810289 MGI:6814709
NCBI chrNW_004955467:7,330,267...7,341,897
Ensembl chrNW_004955467:7,330,188...7,342,053
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Dmpk
DM1 protein kinase
located_in
ISO
(MGI:3575053|PMID:15598648)
UniProt
PMID:15598648
MGI:3575053
NCBI chrNW_004955574:225,615...237,526
Ensembl chrNW_004955574:226,292...237,526
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Fkbp1a
FKBP prolyl isomerase 1A
located_in
ISO
(MGI:3028710|PMID:14592808)
MGI
PMID:14592808
MGI:3028710
NCBI chrNW_004955596:580,106...606,210
Ensembl chrNW_004955596:580,106...603,255
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Fkbp1b
FKBP prolyl isomerase 1B
located_in
ISO
(MGI:3028710|PMID:14592808), (MGI:3620455|PMID:16481613)
MGI
PMID:14592808 PMID:16481613
MGI:3028710 MGI:3620455
NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767
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Hrc
histidine rich calcium binding protein
located_in
ISO
(MGI:3625212|PMID:16600288)
MGI
PMID:16600288
MGI:3625212
NCBI chrNW_004955559:1,583,661...1,587,457
Ensembl chrNW_004955559:1,583,876...1,587,355
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Itpr2
inositol 1,4,5-trisphosphate receptor type 2
located_in
ISO
(PMID:10828023)
BHF-UCL
PMID:10828023
NCBI chrNW_004955413:21,289,673...21,719,610
Ensembl chrNW_004955413:21,291,110...21,719,303
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Klhl41
kelch like family member 41
located_in
ISO
(PMID:24268659) (MGI:5586786|PMID:24268659)
UniProt
PMID:24268659
MGI:5586786
NCBI chrNW_004955449:5,023,362...5,041,006
Ensembl chrNW_004955449:5,023,362...5,061,705
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Mrln
myoregulin
located_in
ISO
(MGI:5614883|PMID:25640239)
MGI
PMID:25640239
MGI:5614883
NCBI chrNW_004955425:13,320,062...13,333,423
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Nos1
nitric oxide synthase 1
located_in
ISO
(MGI:5613473|PMID:19800018)
BHF-UCL
PMID:19800018
MGI:5613473
NCBI chrNW_004955455:13,797,557...13,978,402
Ensembl chrNW_004955455:13,797,545...13,972,566
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Pln
phospholamban
located_in
ISO
(MGI:5751610|PMID:26816378)
UniProt
PMID:26816378
MGI:5751610
NCBI chrNW_004955436:1,439,098...1,447,070
Ensembl chrNW_004955436:1,439,098...1,447,070
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Reep5
receptor accessory protein 5
located_in
ISO
(MGI:6401630|PMID:32075961)
UniProt
PMID:32075961
MGI:6401630
NCBI chrNW_004955418:2,504,028...2,539,574
Ensembl chrNW_004955418:2,502,674...2,536,817
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Ryr1
ryanodine receptor 1
located_in
ISO
(PMID:7556644) PMID:11316255 (MGI:3028710|PMID:14592808), (MGI:3764002|PMID:18003898) PMID:21454501
UniProt
PMID:7556644 PMID:11316255 PMID:14592808 PMID:18003898 PMID:21454501
MGI:3028710 MGI:3764002 RGD:12903237 RGD:8554079
NCBI chrNW_004955468:879,807...1,000,118
Ensembl chrNW_004955468:879,951...1,000,036
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Ryr2
ryanodine receptor 2
located_in
ISO
PMID:11053140 (MGI:3028710|PMID:14592808), (MGI:3620455|PMID:16481613)
BHF-UCL MGI
PMID:11053140 PMID:14592808 PMID:16481613
MGI:3028710 MGI:3620455 RGD:8554533
NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
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Ryr3
ryanodine receptor 3
located_in
ISO
(MGI:3028710|PMID:14592808)
MGI
PMID:14592808
MGI:3028710
NCBI chrNW_004955416:712,506...1,260,111
Ensembl chrNW_004955416:713,373...1,259,885
G
Sln
sarcolipin
located_in
ISO
(MGI:5751610|PMID:26816378)
UniProt
PMID:26816378
MGI:5751610
NCBI chrNW_004955412:10,057,481...10,062,178
G
Stim1
stromal interaction molecule 1
located_in
ISO
(PMID:25326555)
UniProt
PMID:25326555
NCBI chrNW_004955414:19,652,990...19,849,353
Ensembl chrNW_004955414:19,652,990...19,847,964
G
Casq1
calsequestrin 1
ISO
RGD
PMID:11010809
RGD:2313244
NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836
G
Rtn2
reticulon 2
located_in
ISO
(MGI:4438323|PMID:19720795)
MGI
PMID:19720795
MGI:4438323
NCBI chrNW_004955574:1,543...11,476
Ensembl chrNW_004955574:1,071...21,117
G
Ryr1
ryanodine receptor 1
located_in
ISO
PMID:11316255
UniProt
PMID:11316255
RGD:12903237
NCBI chrNW_004955468:879,807...1,000,118
Ensembl chrNW_004955468:879,951...1,000,036
G
Casq1
calsequestrin 1
ISO
RGD
PMID:6355123
RGD:2313258
NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all