Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:tRNA (cytidine) methyltransferase activity
go back to main search page
Accession:GO:0016427 term browser browse the term
Definition:Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing methylcytosine.
Synonyms:exact_synonym: tRNA (cytosine) methyltransferase activity


show annotations for term's descendants           Sort by:
tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ftsj1 FtsJ RNA 2'-O-methyltransferase 1 enables ISO (PMID:25404562), (PMID:26310293), (PMID:36720500) RGD PMID:25404562 PMID:26310293 PMID:36720500 NCBI chr  X:14,243,684...14,256,555
Ensembl chr  X:14,244,050...14,252,030 		JBrowse link
tRNA (cytidine-3-)-methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl2 methyltransferase like 2 enables ISO
IBA		 (PMID:28655767), (PMID:34268557)
MGI:5903740 (PMID:28655767)
GO_REF:0000033		 RGD
GO_Central		 PMID:28655767 PMID:34268557 GO_REF:0000033 NCBI chr10:90,095,527...90,109,354
Ensembl chr10:90,095,527...90,119,528 		JBrowse link
G Mettl6 methyltransferase 6, tRNA N3-cytidine enables ISO (PMID:32923617), (PMID:34268557), (PMID:34862464), (PMID:34922197)
MGI:5903741 (PMID:28655767)		 RGD PMID:28655767 PMID:32923617 PMID:34268557 PMID:34862464 PMID:34922197 NCBI chr16:6,683,820...6,699,013
Ensembl chr16:6,583,465...6,698,975 		JBrowse link
G Mettl8 methyltransferase 8, tRNA N3-cytidine enables ISO
IBA		 (PMID:34774131), (PMID:35017528)
GO_REF:0000033		 RGD
GO_Central		 PMID:34774131 PMID:35017528 GO_REF:0000033 NCBI chr 3:55,731,453...55,863,652
Ensembl chr 3:55,770,167...55,863,676 		JBrowse link
tRNA (cytidine-5-)-methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nsun2 NOP2/Sun RNA methyltransferase 2 enables ISO
IBA		 (PMID:17071714), (PMID:31287866), (PMID:34556860)
(PMID:22885326), (PMID:23871666), (PMID:31276587), (PMID:31287866)
GO_REF:0000033		 RGD
GO_Central		 PMID:17071714 PMID:22885326 PMID:23871666 PMID:31276587 PMID:31287866 More... GO_REF:0000033 NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862 		JBrowse link
G Nsun3 NOP2/Sun RNA methyltransferase 3 enables ISO (PMID:27214402), (PMID:27356879), (PMID:27497299) RGD PMID:27214402 PMID:27356879 PMID:27497299 NCBI chr11:37,490,832...37,575,607
Ensembl chr11:37,490,838...37,568,543 		JBrowse link
G Nsun6 NOP2/Sun RNA methyltransferase 6 enables ISO (PMID:26160102), (PMID:27703015), (PMID:28531330), (PMID:37226891) RGD PMID:26160102 PMID:27703015 PMID:28531330 PMID:37226891 NCBI chr17:77,912,374...77,955,694
Ensembl chr17:77,912,377...77,950,006 		JBrowse link
G Trdmt1 tRNA aspartic acid methyltransferase 1 enables ISS
ISO		 GO_REF:0000024
(PMID:16424344), (PMID:18567810)
(PMID:22885326), (PMID:26271101)		 UniProt
RGD		 PMID:16424344 PMID:18567810 PMID:22885326 PMID:26271101 GO_REF:0000024 NCBI chr17:76,601,966...76,646,104
Ensembl chr17:76,610,543...76,645,439 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21087
    catalytic activity 6127
      catalytic activity, acting on a nucleic acid 636
        catalytic activity, acting on RNA 395
          RNA methyltransferase activity 63
            tRNA methyltransferase activity 31
              tRNA (cytidine) methyltransferase activity 8
                tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase activity 1
                tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase activity 0
                tRNA (cytidine(34)-2'-O)-methyltransferase activity 0
                tRNA (cytidine(56)-2'-O)-methyltransferase activity 0
                tRNA (cytidine-3-)-methyltransferase activity 3
                tRNA (cytidine-5-)-methyltransferase activity 4
Path 2
Term Annotations click to browse term
  molecular_function 21087
    catalytic activity 6127
      transferase activity 2447
        transferase activity, transferring one-carbon groups 214
          methyltransferase activity 203
            RNA methyltransferase activity 63
              tRNA methyltransferase activity 31
                tRNA (cytidine) methyltransferase activity 8
                  tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase activity 1
                  tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase activity 0
                  tRNA (cytidine(34)-2'-O)-methyltransferase activity 0
                  tRNA (cytidine(56)-2'-O)-methyltransferase activity 0
                  tRNA (cytidine-3-)-methyltransferase activity 3
                  tRNA (cytidine-5-)-methyltransferase activity 4
paths to the root