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ONTOLOGY REPORT - ANNOTATIONS


Term:neuron remodeling
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Accession:GO:0016322 term browser browse the term
Definition:The developmentally regulated remodeling of neuronal projections such as pruning to eliminate the extra dendrites and axons projections set up in early stages of nervous system development.
Synonyms:exact_synonym: neuronal remodeling
 narrow_synonym: axon pruning


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neuron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:2153719 (MGI:4361750|PMID:19805386) RGD PMID:19805386 MGI:4361750 NCBI chr13:68,673,702...68,839,742
Ensembl chr13:68,673,722...68,839,742
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1344400 (MGI:5629603|PMID:25611509)
RGD PMID:25611509 PMID:21873635 MGI:5629603, RGD:13792537 NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855
JBrowse link
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A involved_in ISO (MGI:3768579|PMID:17875921) RGD PMID:17875921 MGI:3768579 NCBI chr20:5,963,658...6,117,139
Ensembl chr20:5,963,678...6,117,148
JBrowse link
G App amyloid beta precursor protein involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2136847 (MGI:1334893|PMID:10219973)
UniProt
RGD
PMID:10219973 GO_REF:0000024 MGI:1334893 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G C1qa complement C1q A chain involved_in ISO (MGI:3801262|PMID:18083105) RGD PMID:18083105 MGI:3801262 NCBI chr 5:149,133,635...149,136,482
Ensembl chr 5:149,133,636...149,136,534
JBrowse link
G C1ql1 complement C1q like 1 acts_upstream_of_or_within ISO MGI:5708580 (MGI:5629603|PMID:25611509) RGD PMID:25611509 MGI:5629603 NCBI chr10:87,902,137...87,909,310
Ensembl chr10:87,902,137...87,909,310
JBrowse link
G C3 complement C3 involved_in IEA
ISO
GO_REF:0000107
(MGI:3801262|PMID:18083105)
Ensembl
RGD
PMID:18083105 GO_REF:0000107 MGI:3801262 NCBI chr 9:2,087,437...2,114,366
Ensembl chr 9:2,087,437...2,114,429
JBrowse link
G Cspg4 chondroitin sulfate proteoglycan 4 IDA RGD PMID:12526031 RGD:632591 NCBI chr 8:57,264,962...57,300,010
Ensembl chr 8:57,264,962...57,300,010
JBrowse link
G Ednra endothelin receptor type A involved_in ISO MGI:3773699 (MGI:5688194|PMID:19017795) RGD PMID:19017795 MGI:5688194 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Epha8 Eph receptor A8 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3768579|PMID:17875921)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17875921 GO_REF:0000024 GO_REF:0000107 MGI:3768579 NCBI chr 5:149,166,107...149,193,498
Ensembl chr 5:149,166,697...149,193,399
JBrowse link
G Farp2 FERM, ARH/RhoGEF and pleckstrin domain protein 2 acts_upstream_of_or_within ISO (PMID:12351724) RGD PMID:12351724 NCBI chr 9:94,053,650...94,162,212
Ensembl chr 9:94,053,726...94,162,212
JBrowse link
G Gnaq G protein subunit alpha q involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2151661 (MGI:1100605|PMID:9391157)
Ensembl
RGD
PMID:9391157 GO_REF:0000107 MGI:1100605 NCBI chr 1:213,425,631...213,671,947
Ensembl chr 1:213,424,465...213,667,672
JBrowse link
G Ntn4 netrin 4 acts_upstream_of_or_within ISO (MGI:1913156|PMID:11038171) RGD PMID:11038171 MGI:1913156 NCBI chr 7:28,186,611...28,300,390
Ensembl chr 7:28,186,611...28,300,390
JBrowse link
G Pdgfb platelet derived growth factor subunit B acts_upstream_of_or_within ISO MGI:2670574 (MGI:5607451|PMID:25224828) RGD PMID:25224828 MGI:5607451 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Rnd1 Rho family GTPase 1 involved_in ISO (PMID:11095956) RGD PMID:11095956 NCBI chr 7:129,821,311...129,828,385
Ensembl chr 7:129,821,311...129,828,399
JBrowse link
G Scarf1 scavenger receptor class F, member 1 involved_in ISO (MGI:3772611|PMID:18160648) RGD PMID:18160648 MGI:3772611 NCBI chr10:60,359,213...60,371,516
Ensembl chr10:60,359,197...60,371,516
JBrowse link
negative regulation of neuron remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11a BAF chromatin remodeling complex subunit BCL11A IMP RGD PMID:19616629 RGD:11100018 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    developmental process 6769
      cellular developmental process 4477
        cell maturation 229
          neuron maturation 66
            neuron remodeling 17
              negative regulation of neuron remodeling 1
              positive regulation of neuron remodeling 0
              regulation of neuron remodeling + 1
Path 2
Term Annotations click to browse term
  biological_process 19492
    developmental process 6769
      anatomical structure development 6195
        multicellular organism development 5632
          system development 5300
            nervous system development 2732
              neurogenesis 1952
                generation of neurons 1795
                  neuron differentiation 1624
                    neuron development 1335
                      neuron maturation 66
                        neuron remodeling 17
                          negative regulation of neuron remodeling 1
                          positive regulation of neuron remodeling 0
                          regulation of neuron remodeling + 1
paths to the root