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ONTOLOGY REPORT - ANNOTATIONS

Term:selenocysteine metabolic process
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Accession:GO:0016259 term browser browse the term
Definition:The chemical reactions and pathways involving selenocysteine, an essential component of glutathione peroxidase and some other proteins.
Synonyms:exact_synonym: selenocysteine metabolism

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selenocysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Txnrd1 thioredoxin reductase 1 ISO RGD PMID:10512699 RGD:634379 NCBI chrNW_004955405:38,863,762...38,928,615
Ensembl chrNW_004955405:38,903,918...38,927,410 		JBrowse link
selenocysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sephs2 selenophosphate synthetase 2 acts_upstream_of_or_within ISO (PMID:17346238) MGI PMID:17346238 NCBI chrNW_004955493:7,370,869...7,373,121
Ensembl chrNW_004955493:7,371,617...7,372,945 		JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scly selenocysteine lyase involved_in ISO PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chrNW_004955542:2,453,826...2,472,951
Ensembl chrNW_004955542:2,454,708...2,472,851 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12321
    metabolic process 7441
      organic substance metabolic process 7123
        organonitrogen compound metabolic process 3595
          proteinogenic amino acid metabolic process 111
            serine family amino acid metabolic process 29
              selenocysteine metabolic process 3
                negative regulation of selenocysteine metabolic process 0
                positive regulation of selenocysteine metabolic process 0
                regulation of selenocysteine metabolic process + 0
                selenocysteine biosynthetic process 1
                selenocysteine catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 12321
    metabolic process 7441
      cellular metabolic process 6650
        organic acid metabolic process 663
          oxoacid metabolic process 659
            carboxylic acid metabolic process 651
              alpha-amino acid metabolic process 147
                L-amino acid metabolic process 119
                  serine family amino acid metabolic process 29
                    selenocysteine metabolic process 3
                      negative regulation of selenocysteine metabolic process 0
                      positive regulation of selenocysteine metabolic process 0
                      regulation of selenocysteine metabolic process + 0
                      selenocysteine biosynthetic process 1
                      selenocysteine catabolic process 1
paths to the root