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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of macroautophagy
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Accession:GO:0016239 term browser browse the term
Definition:Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation.
Synonyms:exact_synonym: positive regulation of starvation-induced autophagy;   up regulation of macroautophagy;   upregulation of macroautophagy
 narrow_synonym: activation of macroautophagy;   stimulation of macroautophagy


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positive regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19273585) MGI
Ensembl
PMID:19273585 GO_REF:0000107 NCBI chrNW_004936486:18,449,371...18,460,435
Ensembl chrNW_004936486:18,448,494...18,455,927
JBrowse link
G Bnip3l BCL2 interacting protein 3 like acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19273585) MGI
Ensembl
PMID:19273585 GO_REF:0000107 NCBI chrNW_004936757:499,485...523,494
Ensembl chrNW_004936757:499,147...523,541
JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936611:2,074,655...2,101,846
Ensembl chrNW_004936611:2,078,716...2,101,881
JBrowse link
G Dcn decorin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23798385) MGI
Ensembl
PMID:23798385 GO_REF:0000107 NCBI chrNW_004936507:7,887,259...7,923,055
Ensembl chrNW_004936507:7,884,654...7,922,961
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20453062) MGI
Ensembl
PMID:20453062 GO_REF:0000107 NCBI chrNW_004936625:761,013...819,826
Ensembl chrNW_004936625:738,124...821,566
JBrowse link
G Gnai3 G protein subunit alpha i3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:1,031,476...1,075,662
Ensembl chrNW_004936704:1,032,708...1,074,384
JBrowse link
G Gpsm1 G protein signaling modulator 1 involved_in ISO (PMID:12642577) UniProt PMID:12642577 NCBI chrNW_004936669:1,442,550...1,469,563
Ensembl chrNW_004936669:1,440,902...1,463,944
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19273585) Ensembl
MGI
PMID:19273585 GO_REF:0000107 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157
JBrowse link
G Hmox1 heme oxygenase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20705711) Ensembl
MGI
PMID:20705711 GO_REF:0000107 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311
JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO (PMID:23778976) ParkinsonsUK-UCL PMID:23778976 NCBI chrNW_004936809:1,280,254...1,306,964
Ensembl chrNW_004936809:1,257,654...1,301,813
JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23798385) MGI
Ensembl
PMID:23798385 GO_REF:0000107 NCBI chrNW_004936482:17,537,697...17,581,320
Ensembl chrNW_004936482:17,538,864...17,581,002
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:8,039,887...8,125,006
Ensembl chrNW_004936515:8,043,436...8,063,964
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (PMID:23778976) ParkinsonsUK-UCL PMID:23778976 NCBI chrNW_004936510:1,772,971...1,836,075
Ensembl chrNW_004936510:1,772,971...1,837,765
JBrowse link
G Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:2,390,904...2,417,596
Ensembl chrNW_004936542:2,390,513...2,414,882
JBrowse link
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:17476689) Ensembl
MGI
PMID:17476689 GO_REF:0000107 NCBI chrNW_004936721:839,876...844,488
Ensembl chrNW_004936721:839,874...844,488
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,574,471...6,589,478
Ensembl chrNW_004936474:6,573,623...6,589,478
JBrowse link
G Rab12 RAB12, member RAS oncogene family involved_in ISO (PMID:23357852) UniProt PMID:23357852 NCBI chrNW_004936670:2,315,930...2,338,489
Ensembl chrNW_004936670:2,315,442...2,338,509
JBrowse link
G Rufy4 RUN and FYVE domain containing 4 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936569:654,904...676,012
Ensembl chrNW_004936569:657,071...675,292
JBrowse link
G Scoc short coiled-coil protein involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004936535:7,403,767...7,412,903 JBrowse link
G Sesn1 sestrin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936564:5,187,152...5,291,201
Ensembl chrNW_004936564:5,187,005...5,291,498
JBrowse link
G Sesn2 sestrin 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:12,416,652...12,436,799
Ensembl chrNW_004936474:12,416,652...12,436,814
JBrowse link
G Sesn3 sestrin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936700:2,429,535...2,491,752
Ensembl chrNW_004936700:2,429,446...2,488,127
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936531:8,555,966...8,562,829
Ensembl chrNW_004936531:8,555,637...8,562,885
JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,280,390...2,308,085
Ensembl chrNW_004936661:2,280,285...2,308,780
JBrowse link
G Tbk1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:2,763,755...2,809,229
Ensembl chrNW_004936545:2,763,596...2,809,709
JBrowse link
G Trim13 tripartite motif containing 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936565:2,976,681...2,989,036
Ensembl chrNW_004936565:2,976,729...2,989,088
JBrowse link
G Tsc1 TSC complex subunit 1 ISO RGD PMID:23435171 RGD:10448950 NCBI chrNW_004936487:19,331,183...19,386,841
Ensembl chrNW_004936487:19,331,194...19,386,892
JBrowse link
G Tsc2 TSC complex subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20453062) Ensembl
MGI
PMID:20453062 GO_REF:0000107 NCBI chrNW_004936694:1,958,152...1,993,373
Ensembl chrNW_004936694:1,958,154...1,993,363
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936613:2,793,706...2,862,984
Ensembl chrNW_004936613:2,794,732...2,865,913
JBrowse link
G Wdr24 WD repeat domain 24 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936501:321,877...326,984
Ensembl chrNW_004936501:321,924...327,253
JBrowse link
positive regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag3 BAG cochaperone 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:8,985,871...9,007,461
Ensembl chrNW_004936486:8,985,761...9,007,502
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:22017874) UniProt PMID:22017874 NCBI chrNW_004936485:17,966,993...18,021,191 JBrowse link
G Hspb8 heat shock protein family B (small) member 8 involved_in ISO (PMID:18006506) ARUK-UCL PMID:18006506 NCBI chrNW_004936668:1,496,600...1,505,650 JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128
JBrowse link
G LOC101966195 huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071
JBrowse link
G LOC101977244 zinc finger DHHC-type palmitoyltransferase 19 involved_in ISO (PMID:37802024) UniProt PMID:37802024 NCBI chrNW_004936784:748,381...833,841 JBrowse link
positive regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg2a autophagy related 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,417,810...4,437,639
Ensembl chrNW_004936599:4,417,900...4,437,178
JBrowse link
G Atg7 autophagy related 7 ISO RGD PMID:33372336 RGD:407571673 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256
JBrowse link
G Becn1 beclin 1 ISO RGD PMID:25561470 RGD:11561937 NCBI chrNW_004936490:17,518,100...17,531,126
Ensembl chrNW_004936490:17,517,751...17,531,151
JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:653,434...736,660
Ensembl chrNW_004936704:653,403...739,151
JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,181,009...15,217,952
Ensembl chrNW_004936487:15,180,811...15,217,406
JBrowse link
G Moap1 modulator of apoptosis 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:1,111,256...1,113,651
Ensembl chrNW_004936733:1,111,958...1,113,010
JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:5,383,737...5,540,176
Ensembl chrNW_004936520:5,383,737...5,540,203
JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,168,951...14,201,712
Ensembl chrNW_004936490:14,168,981...14,202,108
JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,737,088...1,748,056
Ensembl chrNW_004936646:1,737,034...1,748,057
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:40,642,240...40,727,831
Ensembl chrNW_004936469:40,641,928...40,727,837
JBrowse link
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936650:1,944,291...2,054,847
Ensembl chrNW_004936650:1,944,346...2,056,665
JBrowse link
G Ralb RAS like proto-oncogene B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:50,237,804...50,279,483
Ensembl chrNW_004936469:50,236,409...50,279,583
JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936732:2,066,848...2,097,947
Ensembl chrNW_004936732:2,067,204...2,097,631
JBrowse link
G Snx18 sorting nexin 18 involved_in ISO (PMID:29437695) UniProt PMID:29437695 NCBI chrNW_004936480:13,108,510...13,137,550 JBrowse link
G Snx30 sorting nexin family member 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:684,536...792,829
Ensembl chrNW_004936559:690,397...792,835
JBrowse link
G Snx4 sorting nexin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937215:127,074...137,281 JBrowse link
G Snx7 sorting nexin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:940,282...1,022,903
Ensembl chrNW_004936537:940,724...1,022,887
JBrowse link
G Trim32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:5,606,690...5,619,856
Ensembl chrNW_004936487:5,606,693...5,619,856
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO RGD PMID:23448468 RGD:13208863 NCBI chrNW_004936660:2,160,394...2,188,848
Ensembl chrNW_004936660:2,163,844...2,187,080
JBrowse link
G Wdr45 WD repeat domain 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:975,113...981,149
Ensembl chrNW_004936721:975,104...981,731
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:7,782,836...7,812,142
Ensembl chrNW_004936541:7,783,322...7,812,054
JBrowse link
positive regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210
JBrowse link
G Calcoco2 calcium binding and coiled-coil domain 2 involved_in ISO (PMID:25771791) GO_Central PMID:25771791 NCBI chrNW_004936490:12,576,752...12,609,273 JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chrNW_004936530:9,089,478...9,264,563
Ensembl chrNW_004936530:9,089,476...9,264,592
JBrowse link
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936596:3,938...81,226
Ensembl chrNW_004936596:3,720...81,257
JBrowse link
G LOC101960300 calcium-binding and coiled-coil domain-containing protein 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936570:22,898...25,121 JBrowse link
G LOC101972667 immunity related GTPase M involved_in ISO (PMID:16888103) UniProt PMID:16888103 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936741:1,838,974...1,848,742
Ensembl chrNW_004936741:1,838,834...1,844,459
JBrowse link
G Tom1 target of myb1 membrane trafficking protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:5,073,274...5,103,733
Ensembl chrNW_004936492:5,073,191...5,103,739
JBrowse link
positive regulation of lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:5,985,407...5,987,453
Ensembl chrNW_004936504:5,985,960...5,987,210
JBrowse link
G LOC101966195 huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071
JBrowse link
G LOC101967158 serine palmitoyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25332431) MGI
Ensembl
PMID:25332431 GO_REF:0000107 NCBI chrNW_004936488:6,313,189...6,404,425
Ensembl chrNW_004936488:6,289,833...6,296,849
Ensembl chrNW_004936488:6,289,833...6,296,849
JBrowse link
G Sesn2 sestrin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22958918) Ensembl
MGI
PMID:22958918 GO_REF:0000107 NCBI chrNW_004936474:12,416,652...12,436,799
Ensembl chrNW_004936474:12,416,652...12,436,814
JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25332431) MGI
Ensembl
PMID:25332431 GO_REF:0000107 NCBI chrNW_004936796:886,946...948,254
Ensembl chrNW_004936796:886,922...948,254
JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,493,823...2,676,868
Ensembl chrNW_004936562:2,493,774...2,676,912
JBrowse link
G Atg7 autophagy related 7 ISO RGD PMID:37042059 RGD:407532700 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256
JBrowse link
G Cers1 ceramide synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,442,978...2,467,184
Ensembl chrNW_004936596:2,442,991...2,467,184
JBrowse link
G Dele1 DAP3 binding cell death enhancer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:12,247,584...12,259,962
Ensembl chrNW_004936504:12,245,776...12,259,851
JBrowse link
G Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936750:389,913...430,783
Ensembl chrNW_004936750:389,845...432,460
JBrowse link
G Fbxo7 F-box protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:7,261,442...7,276,779
Ensembl chrNW_004936492:7,261,009...7,276,943
JBrowse link
G LOC101966195 huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:20,443,101...20,577,167
Ensembl chrNW_004936477:20,443,113...20,577,071
Ensembl chrNW_004936477:20,443,113...20,577,071
JBrowse link
G LOC101972667 immunity related GTPase M involved_in ISO (PMID:21102437), (PMID:32939830)
(PMID:33510463)
UniProt PMID:21102437 PMID:32939830 PMID:33510463 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
IEA
RGD
Ensembl
PMID:28608965 GO_REF:0000107 RGD:13432560 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872
JBrowse link
G Slc25a4 solute carrier family 25 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:4,130,461...4,135,046
Ensembl chrNW_004936554:4,130,459...4,135,044
JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in ISO (PMID:31618756) UniProt PMID:31618756 NCBI chrNW_004936479:10,432,172...10,435,154 JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO PMID:29934347 UniProt PMID:29934347 RGD:405650300 NCBI chrNW_004936501:328,767...330,963
Ensembl chrNW_004936501:326,451...330,983
JBrowse link
G Ube2a ubiquitin conjugating enzyme E2 A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:10,330,666...10,340,268
Ensembl chrNW_004936479:10,330,632...10,340,367
JBrowse link
G Vps13d vacuolar protein sorting 13 homolog D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:955,081...1,194,200
Ensembl chrNW_004936474:955,040...1,195,859
JBrowse link
positive regulation of reticulophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,345,443...13,355,841
Ensembl chrNW_004936490:13,345,443...13,355,841
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:15,516,348...15,526,380
Ensembl chrNW_004936485:15,516,302...15,526,376
JBrowse link
G Ufl1 UFM1 specific ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936699:1,131,385...1,163,310
Ensembl chrNW_004936699:1,129,344...1,163,530
JBrowse link
positive regulation of type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,396,416...12,399,760
Ensembl chrNW_004936474:12,396,023...12,401,023
JBrowse link
G Cdc37 cell division cycle 37, HSP90 cochaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:711,165...721,207
Ensembl chrNW_004936659:711,117...721,260
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23707074) ARUK-UCL
Ensembl
PMID:23707074 GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798
JBrowse link
G Hdac6 histone deacetylase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:757,500...778,416
Ensembl chrNW_004936721:758,181...778,053
JBrowse link
G Hk2 hexokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936556:1,054,143...1,113,425
Ensembl chrNW_004936556:1,054,021...1,113,450
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936751:478,978...622,818
Ensembl chrNW_004936751:478,300...622,820
JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,479,640...6,486,080
Ensembl chrNW_004936474:6,477,504...6,486,660
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,574,471...6,589,478
Ensembl chrNW_004936474:6,573,623...6,589,478
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872
JBrowse link
G Tomm7 translocase of outer mitochondrial membrane 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:30,787...36,952
Ensembl chrNW_004936478:30,666...37,062
JBrowse link
G Vdac1 voltage dependent anion channel 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:1,220,075...1,249,579
Ensembl chrNW_004936647:1,230,450...1,249,814
JBrowse link
positive regulation of xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101972667 immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chrNW_004936504:4,055,091...4,056,089 JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,181,009...15,217,952
Ensembl chrNW_004936487:15,180,811...15,217,406
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22033934) Ensembl
MGI
PMID:22033934 GO_REF:0000107 NCBI chrNW_004936501:12,342,670...12,390,650
Ensembl chrNW_004936501:12,384,804...12,392,180
JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22033934) Ensembl
MGI
PMID:22033934 GO_REF:0000107 NCBI chrNW_004936478:6,717,354...6,768,293
Ensembl chrNW_004936478:6,715,245...6,768,372
JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22033934) Ensembl
MGI
PMID:22033934 GO_REF:0000107 NCBI chrNW_004936475:3,708,069...3,742,845
Ensembl chrNW_004936475:3,713,362...3,745,982
JBrowse link
G Optn optineurin involved_in ISO (PMID:21617041) ParkinsonsUK-UCL PMID:21617041 NCBI chrNW_004937104:73,340...113,179 JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22033934) Ensembl
MGI
PMID:22033934 GO_REF:0000107 NCBI chrNW_004936544:3,606,925...3,653,248
Ensembl chrNW_004936544:3,606,879...3,655,532
JBrowse link
G Rnf31 ring finger protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:385,972...397,718
Ensembl chrNW_004936722:385,971...398,030
JBrowse link
G Tbk1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:2,763,755...2,809,229
Ensembl chrNW_004936545:2,763,596...2,809,709
JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004936576:522,234...531,660
Ensembl chrNW_004936576:527,434...529,788
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17435
    cellular process 17035
      process utilizing autophagic mechanism 515
        autophagy 515
          macroautophagy 319
            positive regulation of macroautophagy 98
              positive regulation of aggrephagy 6
              positive regulation of autophagosome assembly 21
              positive regulation of autophagosome maturation 8
              positive regulation of lipophagy 5
              positive regulation of mitophagy + 25
              positive regulation of reticulophagy 3
              positive regulation of xenophagy 10
Path 2
Term Annotations click to browse term
  biological_process 17435
    biological regulation 11417
      regulation of biological process 11049
        positive regulation of biological process 6178
          positive regulation of cellular process 5883
            positive regulation of metabolic process 3547
              positive regulation of catabolic process 537
                positive regulation of autophagy 164
                  positive regulation of macroautophagy 98
                    positive regulation of aggrephagy 6
                    positive regulation of autophagosome assembly 21
                    positive regulation of autophagosome maturation 8
                    positive regulation of lipophagy 5
                    positive regulation of mitophagy + 25
                    positive regulation of reticulophagy 3
                    positive regulation of xenophagy 10
paths to the root