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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of macroautophagy
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Accession:GO:0016239 term browser browse the term
Definition:Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation.
Synonyms:exact_synonym: positive regulation of starvation-induced autophagy;   up regulation of macroautophagy;   upregulation of macroautophagy
 narrow_synonym: activation of macroautophagy;   stimulation of macroautophagy


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positive regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BNIP3 BCL2 interacting protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19273585) MGI
Ensembl
PMID:19273585 GO_REF:0000107 NCBI chr 9:124,570,958...124,586,002
Ensembl chr 9:124,568,695...124,585,980
JBrowse link
G BNIP3L BCL2 interacting protein 3 like acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:19273585) MGI
Ensembl
PMID:19273585 GO_REF:0000107 NCBI chr 8:24,497,311...24,521,424
Ensembl chr 8:24,497,351...24,523,553
JBrowse link
G DCN decorin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23798385) MGI
Ensembl
PMID:23798385 GO_REF:0000107 NCBI chr11:86,552,392...86,590,229
Ensembl chr11:86,551,072...86,586,891
JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20453062) MGI
Ensembl
PMID:20453062 GO_REF:0000107 NCBI chr13:26,152,974...26,266,676
Ensembl chr13:26,153,319...26,264,568
JBrowse link
G GNAI1 G protein subunit alpha i1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:68,687,809...68,770,415
Ensembl chr21:68,687,307...68,770,360
JBrowse link
G GNAI3 G protein subunit alpha i3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:23,950,819...24,000,069
Ensembl chr20:23,954,384...23,999,072
JBrowse link
G GPSM1 G protein signaling modulator 1 involved_in ISO (PMID:12642577) UniProt PMID:12642577 NCBI chr12:1,845,882...1,877,400
Ensembl chr12:1,847,233...1,877,265
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19273585) Ensembl
MGI
PMID:19273585 GO_REF:0000107 NCBI chr24:38,873,830...38,927,657
Ensembl chr24:38,873,861...38,928,288
JBrowse link
G HMOX1 heme oxygenase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20705711) MGI
Ensembl
PMID:20705711 GO_REF:0000107 NCBI chr19:18,144,466...18,157,944
Ensembl chr19:18,144,545...18,157,971
JBrowse link
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO (PMID:23778976) ParkinsonsUK-UCL PMID:23778976 NCBI chr  X:128,781,975...128,816,039
Ensembl chr  X:128,787,785...128,806,083
JBrowse link
G IL4 interleukin 4 involved_in ISO (PMID:26416964) UniProt PMID:26416964 NCBI chr23:35,492,158...35,501,349
Ensembl chr23:35,492,939...35,501,258
JBrowse link
G KDR kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23798385) MGI
Ensembl
PMID:23798385 GO_REF:0000107 NCBI chr 7:13,435,059...13,482,236
Ensembl chr 7:13,435,096...13,482,771
JBrowse link
G LACRT lacritin involved_in ISO (PMID:23640897) FlyBase PMID:23640897 NCBI chr11:50,746,437...50,752,631 JBrowse link
G LACRT lacritin involved_in IEA Ensembl GO_REF:0000107 Ensembl chr11:50,746,518...50,750,513 JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:57,126,878...57,265,243
Ensembl chr23:57,238,336...57,261,710
JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (PMID:23778976) ParkinsonsUK-UCL PMID:23778976 NCBI chr13:15,284,927...15,360,539
Ensembl chr13:15,284,923...15,360,832
JBrowse link
G PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,514,443...108,542,495
Ensembl chr 1:108,514,172...108,544,049
JBrowse link
G PIM2 Pim-2 proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:17476689) MGI PMID:17476689 NCBI chr  X:46,032,640...46,040,220 JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:111,902,135...111,919,082
Ensembl chr20:111,902,765...111,919,069
JBrowse link
G RAB12 RAB12, member RAS oncogene family involved_in ISO (PMID:23357852) UniProt PMID:23357852 NCBI chr18:67,572,529...67,600,646
Ensembl chr18:67,572,519...67,601,428
JBrowse link
G RUFY4 RUN and FYVE domain containing 4 involved_in IEA InterPro
TreeGrafter
Ensembl
GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chr10:103,958,208...103,979,948
Ensembl chr10:103,958,495...103,979,410
JBrowse link
G SCOC short coiled-coil protein involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chr 7:87,326,672...87,336,034 JBrowse link
G SESN1 sestrin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:64,756,393...64,864,795
Ensembl chr13:64,841,773...64,863,698
JBrowse link
G SESN2 sestrin 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr20:104,521,131...104,544,161
Ensembl chr20:104,521,132...104,544,001
JBrowse link
G SESN3 sestrin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 1:86,426,258...86,486,465
Ensembl chr 1:86,427,988...86,486,477
JBrowse link
G SIRT1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:63,463,059...63,497,893
Ensembl chr 9:63,462,389...63,497,867
JBrowse link
G STING1 stimulator of interferon response cGAMP interactor 1 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr23:42,153,576...42,160,903
Ensembl chr23:42,153,026...42,160,907
JBrowse link
G SUPT5H SPT5 homolog, DSIF elongation factor subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,052,587...34,086,022
Ensembl chr 6:34,052,577...34,085,782
JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,136,162...60,182,354
Ensembl chr11:60,136,232...60,182,344
JBrowse link
G TRIM13 tripartite motif containing 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:27,851,552...27,925,379
Ensembl chr 3:27,924,150...27,925,373
JBrowse link
G TSC1 TSC complex subunit 1 ISO RGD PMID:23435171 RGD:10448950 NCBI chr12:5,195,604...5,249,042
Ensembl chr12:5,195,675...5,244,157
JBrowse link
G TSC2 TSC complex subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:20453062) Ensembl
MGI
PMID:20453062 GO_REF:0000107 NCBI chr 5:1,946,534...1,985,168
Ensembl chr 5:1,946,927...1,987,682
JBrowse link
G WAC WW domain containing adaptor with coiled-coil involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:28,131,774...28,222,501
Ensembl chr 9:28,131,769...28,219,134
JBrowse link
G WDR24 WD repeat domain 24 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:604,412...610,665
Ensembl chr 5:604,545...610,359
JBrowse link
positive regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG3 BAG cochaperone 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:112,439,954...112,465,875
Ensembl chr 9:112,439,782...112,466,086
JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 involved_in ISO (PMID:22017874) UniProt PMID:22017874 NCBI chr 2:55,982,259...56,047,023 JBrowse link
G HSPB8 heat shock protein family B (small) member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:114,522,236...114,540,186
Ensembl chr11:114,522,248...114,540,477
JBrowse link
G HTT huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:45,493,467...45,657,690
Ensembl chr27:45,497,352...45,657,621
JBrowse link
G KAT5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:8,528,097...8,544,512
Ensembl chr 1:8,526,788...8,544,972
JBrowse link
G ZDHHC19 zinc finger DHHC-type palmitoyltransferase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:90,974,291...90,989,857
Ensembl chr15:90,974,703...90,989,006
JBrowse link
positive regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG2A autophagy related 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:9,316,567...9,339,244
Ensembl chr 1:9,316,675...9,339,265
JBrowse link
G ATG7 autophagy related 7 ISO RGD PMID:33372336 RGD:407571673 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G BECN1 beclin 1 ISO RGD PMID:25561470 RGD:11561937 NCBI chr16:63,469,187...63,482,627
Ensembl chr16:63,469,192...63,485,322
JBrowse link
G ELAPOR1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in ISO (PMID:21072319) BHF-UCL PMID:21072319 NCBI chr20:24,357,584...24,365,702 JBrowse link
G LOC103225886 endosome/lysosome-associated apoptosis and autophagy regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:24,339,508...24,429,525
Ensembl chr20:24,339,729...24,380,162
JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,623,118...10,677,002
Ensembl chr12:10,622,893...10,676,553
JBrowse link
G MOAP1 modulator of apoptosis 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr24:70,920,083...70,921,138 JBrowse link
G PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:22,306,307...22,482,074
Ensembl chr 9:22,306,312...22,481,954
JBrowse link
G PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:67,391,786...67,429,560
Ensembl chr16:67,406,981...67,427,691
JBrowse link
G PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:53,499,360...53,511,610
Ensembl chr11:53,499,432...53,509,799
JBrowse link
G RAB3GAP1 RAB3 GTPase activating protein catalytic subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:19,295,294...19,401,595
Ensembl chr10:19,295,351...19,402,212
JBrowse link
G RAB3GAP2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:9,293,791...9,411,950
Ensembl chr25:9,293,838...9,415,319
JBrowse link
G RALB RAS like proto-oncogene B involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:9,999,828...10,041,158
Ensembl chr10:9,999,904...10,016,473
JBrowse link
G SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:46,707,556...46,746,785
Ensembl chr20:46,707,910...46,746,735
JBrowse link
G SNX18 sorting nexin 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:50,782,842...50,810,220
Ensembl chr 4:50,782,929...50,811,253
JBrowse link
G SNX30 sorting nexin family member 30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:26,650,088...26,774,395
Ensembl chr12:26,656,221...26,774,009
JBrowse link
G SNX4 sorting nexin 4 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr22:55,311,896...55,389,174
Ensembl chr22:55,311,933...55,389,349
JBrowse link
G SNX7 sorting nexin 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,531,399...34,639,958
Ensembl chr20:34,531,151...34,639,107
JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,893,689...22,906,913
Ensembl chr12:22,894,886...22,896,847
JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 ISO RGD PMID:23448468 RGD:13208863 NCBI chr11:127,276,172...127,304,270
Ensembl chr11:127,276,210...127,304,497
JBrowse link
G WDR45 WD repeat domain 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,183,278...46,188,564
Ensembl chr  X:46,183,443...46,188,536
JBrowse link
G WIPI1 WD repeat domain, phosphoinositide interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:53,096,027...53,133,828
Ensembl chr16:53,096,023...53,135,010
JBrowse link
positive regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:51,445,920...51,447,942
Ensembl chr23:51,446,154...51,447,401
JBrowse link
G CALCOCO2 calcium binding and coiled-coil domain 2 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr16:69,242,720...69,274,364
Ensembl chr16:69,251,963...69,273,384
JBrowse link
G CLEC16A C-type lectin domain containing 16A acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chr 5:10,420,866...10,658,370
Ensembl chr 5:10,420,931...10,658,507
JBrowse link
G FYCO1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in IEA TreeGrafter
Ensembl
GO_REF:0000107 GO_REF:0000118 NCBI chr22:7,388,796...7,466,463
Ensembl chr22:7,388,704...7,466,430
JBrowse link
G IRGM immunity related GTPase M involved_in ISO (PMID:16888103) UniProt PMID:16888103 NCBI chr23:53,449,576...53,451,373 JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:17,358,952...17,367,323
Ensembl chr16:17,359,577...17,366,851
JBrowse link
G TOM1 target of myb1 membrane trafficking protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,062,890...18,110,306
Ensembl chr19:18,062,948...18,111,585
JBrowse link
positive regulation of lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB2 adrenoceptor beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:51,445,920...51,447,942
Ensembl chr23:51,446,154...51,447,401
JBrowse link
G HTT huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:45,493,467...45,657,690
Ensembl chr27:45,497,352...45,657,621
JBrowse link
G SESN2 sestrin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22958918) Ensembl
MGI
PMID:22958918 GO_REF:0000107 NCBI chr20:104,521,131...104,544,161
Ensembl chr20:104,521,132...104,544,001
JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25332431) MGI
Ensembl
PMID:25332431 GO_REF:0000107 NCBI chr12:102,475,437...102,551,401
Ensembl chr12:102,475,415...102,551,322
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chr24:54,769,072...54,876,963 JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr24:54,769,340...54,823,210 JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMBRA1 autophagy and beclin 1 regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:18,777,807...18,932,784
Ensembl chr 1:18,734,926...18,932,785
JBrowse link
G ATG7 autophagy related 7 ISO RGD PMID:37042059 RGD:407532700 NCBI chr22:47,187,305...47,571,309
Ensembl chr22:47,325,614...47,571,070
JBrowse link
G CERS1 ceramide synthase 1 involved_in ISO (PMID:22922758) UniProt PMID:22922758 NCBI chr 6:17,331,021...17,351,542 JBrowse link
G CERS1 ceramide synthase 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:17,331,107...17,351,496 JBrowse link
G DELE1 DAP3 binding cell death enhancer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:44,554,027...44,571,738
Ensembl chr23:44,554,705...44,570,352
JBrowse link
G EIF2AK1 eukaryotic translation initiation factor 2 alpha kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,225,768...15,269,692
Ensembl chr28:15,233,909...15,269,594
JBrowse link
G FBXO7 F-box protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:15,300,135...15,324,256
Ensembl chr19:15,300,158...15,323,956
JBrowse link
G HTT huntingtin involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:45,493,467...45,657,690
Ensembl chr27:45,497,352...45,657,621
JBrowse link
G IRGM immunity related GTPase M involved_in ISO (PMID:21102437), (PMID:32939830)
(PMID:33510463)
UniProt PMID:21102437 PMID:32939830 PMID:33510463 NCBI chr23:53,449,576...53,451,373 JBrowse link
G LOC103247334 ADP/ATP translocase 2 involved_in ISO (PMID:31618756) UniProt PMID:31618756
G NOD2 nucleotide binding oligomerization domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:36,492,158...36,531,766
Ensembl chr 5:36,496,414...36,530,499
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:26310625) RGD
ParkinsonsUK-UCL
PMID:26310625 PMID:28608965 RGD:13432560 NCBI chr13:88,856,056...90,329,379 JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr13:89,318,323...90,034,758 JBrowse link
G SLC25A4 solute carrier family 25 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:131,102,077...131,106,076 JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 involved_in ISO PMID:29934347 UniProt PMID:29934347 RGD:405650300 NCBI chr 5:599,907...602,549
Ensembl chr 5:599,819...605,567
JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A involved_in IEA Ensembl GO_REF:0000107
G VPS13D vacuolar protein sorting 13 homolog D involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:119,289,515...119,573,504
Ensembl chr20:119,288,989...119,569,221
JBrowse link
positive regulation of reticulophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDK5RAP3 CDK5 regulatory subunit associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:68,367,591...68,382,000
Ensembl chr16:68,370,483...68,382,022
JBrowse link
G DDRGK1 DDRGK domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:33,846,591...33,879,770
Ensembl chr 2:33,860,439...33,880,101
JBrowse link
G UFL1 UFM1 specific ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:77,357,239...77,387,385
Ensembl chr13:77,357,141...77,387,367
JBrowse link
positive regulation of type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5IF1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) ParkinsonsUK-UCL PMID:24005319 NCBI chr20:104,567,306...104,569,346 JBrowse link
G CDC37 cell division cycle 37, HSP90 cochaperone involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:9,427,220...9,439,469
Ensembl chr 6:9,427,191...9,439,913
JBrowse link
G GBA1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:23707074) ARUK-UCL PMID:23707074 NCBI chr20:8,598,110...8,631,517
Ensembl chr20:8,598,628...8,630,990
JBrowse link
G HDAC6 histone deacetylase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,927,625...45,951,636
Ensembl chr  X:45,928,092...45,952,929
JBrowse link
G HK2 hexokinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:32,385,237...32,443,864
Ensembl chr14:32,385,249...32,442,403
JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:49,661,506...49,814,551
Ensembl chr  X:49,660,790...49,808,572
JBrowse link
G LOC119623630 lysosomal acid glucosylceramidase involved_in IEA Ensembl GO_REF:0000107
G MUL1 mitochondrial E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:112,042,777...112,051,866
Ensembl chr20:112,042,481...112,052,168
JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:111,902,135...111,919,082
Ensembl chr20:111,902,765...111,919,069
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:20871098), (PMID:23212910)
(PMID:20457763)
ParkinsonsUK-UCL PMID:20457763 PMID:20871098 PMID:23212910 NCBI chr13:88,856,056...90,329,379 JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 Ensembl chr13:89,318,323...90,034,758 JBrowse link
G TOMM7 translocase of outer mitochondrial membrane 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:35,485,860...35,496,281
Ensembl chr21:35,485,685...35,497,325
JBrowse link
G VDAC1 voltage dependent anion channel 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:36,783,670...36,817,071 JBrowse link
positive regulation of xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IRGM immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chr23:53,449,576...53,451,373 JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:10,623,118...10,677,002
Ensembl chr12:10,622,893...10,676,553
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22033934) Ensembl
MGI
PMID:22033934 GO_REF:0000107 NCBI chr 5:26,536,471...26,545,666
Ensembl chr 5:26,536,532...26,546,461
JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22033934) Ensembl
MGI
PMID:22033934 GO_REF:0000107 NCBI chr21:27,907,628...27,957,621
Ensembl chr21:27,926,710...27,957,619
JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:22033934) MGI
Ensembl
PMID:22033934 GO_REF:0000107 NCBI chr 5:36,492,158...36,531,766
Ensembl chr 5:36,496,414...36,530,499
JBrowse link
G OPTN optineurin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:13,142,036...13,176,996
Ensembl chr 9:13,150,426...13,177,021
JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22033934) Ensembl
MGI
PMID:22033934 GO_REF:0000107 NCBI chr 8:84,843,391...84,881,087
Ensembl chr 8:84,843,471...84,881,303
JBrowse link
G RNF31 ring finger protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:1,133,589...1,146,020
Ensembl chr24:1,133,723...1,142,943
JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:60,136,162...60,182,354
Ensembl chr11:60,136,232...60,182,344
JBrowse link
G TLR2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chr 7:100,239,533...100,565,955
Ensembl chr 7:100,258,441...100,260,795
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19829
    cellular process 19347
      process utilizing autophagic mechanism 549
        autophagy 549
          macroautophagy 333
            positive regulation of macroautophagy 105
              positive regulation of aggrephagy 6
              positive regulation of autophagosome assembly 22
              positive regulation of autophagosome maturation 7
              positive regulation of lipophagy 6
              positive regulation of mitophagy + 28
              positive regulation of reticulophagy 3
              positive regulation of xenophagy 10
Path 2
Term Annotations click to browse term
  biological_process 19829
    biological regulation 12162
      regulation of biological process 11764
        positive regulation of biological process 6659
          positive regulation of cellular process 6332
            positive regulation of metabolic process 3766
              positive regulation of catabolic process 560
                positive regulation of autophagy 170
                  positive regulation of macroautophagy 105
                    positive regulation of aggrephagy 6
                    positive regulation of autophagosome assembly 22
                    positive regulation of autophagosome maturation 7
                    positive regulation of lipophagy 6
                    positive regulation of mitophagy + 28
                    positive regulation of reticulophagy 3
                    positive regulation of xenophagy 10
paths to the root