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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of macroautophagy
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Accession:GO:0016239 term browser browse the term
Definition:Any process, such as recognition of nutrient depletion, that activates or increases the rate of macroautophagy to bring cytosolic macromolecules to the vacuole/lysosome for degradation.
Synonyms:exact_synonym: positive regulation of starvation-induced autophagy;   up regulation of macroautophagy;   upregulation of macroautophagy
 narrow_synonym: activation of macroautophagy;   stimulation of macroautophagy


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positive regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 acts_upstream_of_or_within ISO (PMID:19273585) MGI PMID:19273585 NCBI chrNW_004955477:9,621,812...9,630,406
Ensembl chrNW_004955477:9,621,812...9,638,099
JBrowse link
G Bnip3l BCL2 interacting protein 3 like acts_upstream_of_or_within ISO (PMID:19273585) MGI PMID:19273585 NCBI chrNW_004955403:49,122,408...49,144,162
Ensembl chrNW_004955403:49,122,408...49,144,998
JBrowse link
G C9orf72 C9orf72-SMCR8 complex subunit involved_in ISO (PMID:27103069), (PMID:27334615) HGNC PMID:27103069 PMID:27334615 NCBI chrNW_004955472:7,299,092...7,337,591
Ensembl chrNW_004955472:7,310,788...7,337,735
JBrowse link
G Dcn decorin acts_upstream_of_or_within ISO (PMID:23798385) MGI PMID:23798385 NCBI chrNW_004955405:28,335,493...28,371,912
Ensembl chrNW_004955405:28,332,545...28,372,323
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO (PMID:20453062) MGI PMID:20453062 NCBI chrNW_004955436:14,925,452...14,982,357
Ensembl chrNW_004955436:14,926,123...14,983,180
JBrowse link
G Gnai3 G protein subunit alpha i3 involved_in ISO (PMID:12642577) UniProt PMID:12642577 NCBI chrNW_004955435:12,965,006...13,005,614
Ensembl chrNW_004955435:12,965,006...13,005,614
JBrowse link
G Gpsm1 G protein signaling modulator 1 involved_in ISO (PMID:12642577) UniProt PMID:12642577 NCBI chrNW_004955513:4,363,534...4,387,356
Ensembl chrNW_004955513:4,361,139...4,387,356
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha acts_upstream_of_or_within ISO (PMID:19273585) MGI PMID:19273585 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO (PMID:20705711) MGI PMID:20705711 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979
JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO (PMID:23778976) ParkinsonsUK-UCL PMID:23778976 NCBI chrNW_004955580:1,053,823...1,069,802
Ensembl chrNW_004955580:1,053,823...1,069,802
JBrowse link
G Il4 interleukin 4 involved_in ISO (PMID:26416964) UniProt PMID:26416964 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within ISO (PMID:23798385) MGI PMID:23798385 NCBI chrNW_004955447:15,810,816...15,851,702
Ensembl chrNW_004955447:15,810,815...15,853,583
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955408:9,002,443...9,080,938
Ensembl chrNW_004955408:9,002,458...9,080,938
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (PMID:23778976) ParkinsonsUK-UCL PMID:23778976 NCBI chrNW_004955411:17,177,335...17,229,957
Ensembl chrNW_004955411:17,177,335...17,229,957
JBrowse link
G Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955412:18,471,621...18,494,082
Ensembl chrNW_004955412:18,474,199...18,494,082
JBrowse link
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (PMID:17476689) MGI PMID:17476689 NCBI chrNW_004955543:444,314...449,201
Ensembl chrNW_004955543:444,314...449,201
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:20871098) ParkinsonsUK-UCL PMID:20871098 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125
JBrowse link
G Rab12 RAB12, member RAS oncogene family involved_in ISO (PMID:23357852) UniProt PMID:23357852 NCBI chrNW_004955402:3,102,709...3,109,701
Ensembl chrNW_004955402:3,103,708...3,110,701
JBrowse link
G Rufy4 RUN and FYVE domain containing 4 involved_in ISO (PMID:26416964) UniProt PMID:26416964 NCBI chrNW_004955453:15,243,125...15,259,086
Ensembl chrNW_004955453:15,242,954...15,257,976
JBrowse link
G Scoc short coiled-coil protein involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955428:3,404,372...3,435,653
Ensembl chrNW_004955428:3,404,326...3,435,759
JBrowse link
G Sesn2 sestrin 2 involved_in ISO (PMID:23274085) UniProt PMID:23274085 NCBI chrNW_004955452:7,392,644...7,417,204
Ensembl chrNW_004955452:7,393,007...7,417,304
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18296641)
(PMID:18296641), (PMID:21189328)
UniProt PMID:18296641 PMID:21189328 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:30568238), (PMID:30842662), (PMID:37535724) UniProt PMID:30568238 PMID:30842662 PMID:37535724 NCBI chrNW_004955418:1,091,022...1,097,064
Ensembl chrNW_004955418:1,083,613...1,100,448
JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955468:95,997...123,005
Ensembl chrNW_004955468:95,181...123,147
JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:27103069) HGNC PMID:27103069 NCBI chrNW_004955458:11,210,120...11,263,632
Ensembl chrNW_004955458:11,211,398...11,263,867
JBrowse link
G Trim13 tripartite motif containing 13 involved_in ISO (PMID:22178386) UniProt PMID:22178386 NCBI chrNW_004955431:3,324,331...3,395,724
Ensembl chrNW_004955431:3,324,331...3,395,724
JBrowse link
G Tsc1 TSC complex subunit 1 ISO RGD PMID:23435171 RGD:10448950 NCBI chrNW_004955513:2,197,037...2,244,992
Ensembl chrNW_004955513:2,197,037...2,244,992
JBrowse link
G Tsc2 TSC complex subunit 2 involved_in
acts_upstream_of_or_within
ISO (PMID:23778976)
(PMID:20453062)
ParkinsonsUK-UCL
MGI
PMID:20453062 PMID:23778976 NCBI chrNW_004955442:15,178,356...15,216,978
Ensembl chrNW_004955442:15,178,487...15,216,362
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955462:2,358,842...2,435,644
Ensembl chrNW_004955462:2,358,842...2,435,628
JBrowse link
positive regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag3 BAG cochaperone 3 involved_in ISO (PMID:18006506) ARUK-UCL PMID:18006506 NCBI chrNW_004955551:446,322...468,329
Ensembl chrNW_004955551:446,605...469,207
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:22017874) UniProt PMID:22017874 NCBI chrNW_004955597:326,601...397,112 JBrowse link
G Hspb8 heat shock protein family B (small) member 8 involved_in ISO (PMID:18006506) ARUK-UCL PMID:18006506 NCBI chrNW_004955455:12,290,884...12,304,588
Ensembl chrNW_004955455:12,290,587...12,304,656
JBrowse link
G Htt huntingtin involved_in ISO (PMID:25686248) ParkinsonsUK-UCL PMID:25686248 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:31857589) UniProt PMID:31857589 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036
JBrowse link
G Zdhhc19 zinc finger DHHC-type palmitoyltransferase 19 involved_in ISO (PMID:37802024) UniProt PMID:37802024 NCBI chrNW_004955420:12,432,342...12,442,411
Ensembl chrNW_004955420:12,432,279...12,442,249
JBrowse link
positive regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg2a autophagy related 2A involved_in ISO (PMID:30952800), (PMID:31271352) UniProt PMID:30952800 PMID:31271352 NCBI chrNW_004955422:20,261,749...20,290,879
Ensembl chrNW_004955422:20,271,330...20,291,875
JBrowse link
G Atg7 autophagy related 7 ISO RGD PMID:33372336 RGD:407571673 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
G Becn1 beclin 1 ISO RGD PMID:25561470 RGD:11561937 NCBI chrNW_004955451:16,616,595...16,625,731
Ensembl chrNW_004955451:16,616,595...16,625,730
JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in ISO (PMID:21072319) BHF-UCL PMID:21072319 NCBI chrNW_004955435:12,531,651...12,626,969
Ensembl chrNW_004955435:12,531,642...12,627,874
JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:25484098) GO_Central PMID:25484098 NCBI chrNW_004955419:1,121,127...1,154,356
Ensembl chrNW_004955419:1,121,127...1,154,356
JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISO (PMID:25578879) ParkinsonsUK-UCL PMID:25578879 NCBI chrNW_004955429:6,231,135...6,399,672
Ensembl chrNW_004955429:6,336,355...6,399,672
JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO (PMID:25578879) ParkinsonsUK-UCL PMID:25578879 NCBI chrNW_004955451:13,842,814...13,856,301
Ensembl chrNW_004955451:13,842,814...13,856,302
JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO (PMID:25578879) ParkinsonsUK-UCL PMID:25578879 NCBI chrNW_004955458:5,315,083...5,327,617
Ensembl chrNW_004955458:5,315,376...5,327,617
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (PMID:25495476) GO_Central PMID:25495476 NCBI chrNW_004955440:2,551,015...2,645,938
Ensembl chrNW_004955440:2,550,982...2,646,331
JBrowse link
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in ISO (PMID:25495476) GO_Central PMID:25495476 NCBI chrNW_004955520:3,411,504...3,483,703
Ensembl chrNW_004955520:3,411,770...3,483,413
JBrowse link
G Ralb RAS like proto-oncogene B involved_in ISO (PMID:24056301) UniProt PMID:24056301 NCBI chrNW_004955459:9,533,081...9,574,464
Ensembl chrNW_004955459:9,531,538...9,574,766
JBrowse link
G Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 involved_in ISO (PMID:21068542) UniProt PMID:21068542 NCBI chrNW_004955423:7,393,186...7,414,199
Ensembl chrNW_004955423:7,393,186...7,423,903
JBrowse link
G Snx18 sorting nexin 18 involved_in ISO (PMID:29437695) UniProt PMID:29437695 NCBI chrNW_004955446:13,043,821...13,067,933
Ensembl chrNW_004955446:13,043,821...13,067,933
JBrowse link
G Snx30 sorting nexin family member 30 involved_in ISO (PMID:32513819) UniProt PMID:32513819 NCBI chrNW_004955419:14,567,317...14,645,442
Ensembl chrNW_004955419:14,567,317...14,619,637
JBrowse link
G Snx4 sorting nexin 4 involved_in ISO (PMID:32513819), (PMID:33468622) UniProt PMID:32513819 PMID:33468622 NCBI chrNW_004955427:24,520,125...24,579,589
Ensembl chrNW_004955427:24,520,125...24,579,589
JBrowse link
G Snx7 sorting nexin 7 involved_in ISO (PMID:32513819) UniProt PMID:32513819 NCBI chrNW_004955435:3,481,304...3,543,801
Ensembl chrNW_004955435:3,477,496...3,543,886
JBrowse link
G Trim32 tripartite motif containing 32 involved_in ISO (PMID:37943659) UniProt PMID:37943659 NCBI chrNW_004955419:11,151,751...11,168,046
Ensembl chrNW_004955419:11,151,751...11,168,041
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 ISO RGD PMID:23448468 RGD:13208863 NCBI chrNW_004955482:760,200...777,133
Ensembl chrNW_004955482:761,811...777,133
JBrowse link
G Wdr45 WD repeat domain 45 involved_in ISO (PMID:31271352) UniProt PMID:31271352 NCBI chrNW_004955543:597,796...604,163
Ensembl chrNW_004955543:597,814...603,963
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:31271352) UniProt PMID:31271352 NCBI chrNW_004955478:4,309,975...4,341,107
Ensembl chrNW_004955478:4,309,880...4,343,934
JBrowse link
positive regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 involved_in ISO (PMID:23708524) GO_Central PMID:23708524 NCBI chrNW_004955415:5,515,157...5,517,198
Ensembl chrNW_004955415:5,515,697...5,516,980
JBrowse link
G Calcoco2 calcium binding and coiled-coil domain 2 involved_in ISO (PMID:25771791) GO_Central PMID:25771791 NCBI chrNW_004955451:12,443,262...12,469,608
Ensembl chrNW_004955451:12,443,796...12,469,857
JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chrNW_004955442:7,369,616...7,584,052
Ensembl chrNW_004955442:7,368,952...7,584,703
JBrowse link
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in ISO (PMID:26468287) ParkinsonsUK-UCL PMID:26468287 NCBI chrNW_004955420:26,019,621...26,076,846
Ensembl chrNW_004955420:26,019,514...26,074,492
JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:16888103) UniProt PMID:16888103 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) HGNC PMID:28195531 NCBI chrNW_004955478:11,002,174...11,015,123
Ensembl chrNW_004955478:11,002,174...11,015,123
JBrowse link
G Tom1 target of myb1 membrane trafficking protein involved_in ISO (PMID:23023224) UniProt PMID:23023224 NCBI chrNW_004955405:43,091,632...43,115,016
Ensembl chrNW_004955405:43,091,633...43,115,016
JBrowse link
positive regulation of lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 involved_in ISO (PMID:23708524) GO_Central PMID:23708524 NCBI chrNW_004955415:5,515,157...5,517,198
Ensembl chrNW_004955415:5,515,697...5,516,980
JBrowse link
G Htt huntingtin involved_in ISO (PMID:25686248) ParkinsonsUK-UCL PMID:25686248 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889
JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO (PMID:22958918) MGI PMID:22958918 NCBI chrNW_004955452:7,392,644...7,417,204
Ensembl chrNW_004955452:7,393,007...7,417,304
JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chrNW_004955515:57,711...161,012
Ensembl chrNW_004955515:57,711...161,611
JBrowse link
G Sptlc2 serine palmitoyltransferase long chain base subunit 2 acts_upstream_of_or_within ISO (PMID:25332431) MGI PMID:25332431 NCBI chrNW_004955438:1,385,431...1,491,534
Ensembl chrNW_004955438:1,385,431...1,491,578
JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:30217973) UniProt PMID:30217973 NCBI chrNW_004955422:1,455,392...1,644,368
Ensembl chrNW_004955422:1,455,380...1,644,452
JBrowse link
G Atg7 autophagy related 7 ISO RGD PMID:37042059 RGD:407532700 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
G Cers1 ceramide synthase 1 involved_in ISO (PMID:22922758) UniProt PMID:22922758 NCBI chrNW_004955524:2,788,672...2,798,068
Ensembl chrNW_004955524:2,788,653...2,796,370
JBrowse link
G Dele1 DAP3 binding cell death enhancer 1 involved_in ISO (PMID:38340717) UniProt PMID:38340717 NCBI chrNW_004955415:11,851,023...11,869,905
Ensembl chrNW_004955415:11,854,526...11,869,777
JBrowse link
G Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 involved_in ISO (PMID:38340717) UniProt PMID:38340717 NCBI chrNW_004955460:13,723,674...13,754,545
Ensembl chrNW_004955460:13,723,777...13,754,150
JBrowse link
G Fbxo7 F-box protein 7 involved_in ISO PMID:26310625
(PMID:26310625)
ParkinsonsUK-UCL PMID:26310625 RGD:11536096 NCBI chrNW_004955405:41,429,421...41,449,670
Ensembl chrNW_004955405:41,433,082...41,453,909
JBrowse link
G Htt huntingtin involved_in ISO (PMID:25686248) ParkinsonsUK-UCL PMID:25686248 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889
JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:21102437), (PMID:32939830)
(PMID:33510463)
UniProt PMID:21102437 PMID:32939830 PMID:33510463 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:31919280) UniProt PMID:31919280 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:26310625) RGD
ParkinsonsUK-UCL
PMID:26310625 PMID:28608965 RGD:13432560 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Slc25a4 solute carrier family 25 member 4 involved_in ISO (PMID:31618756) UniProt PMID:31618756 NCBI chrNW_004955403:23,878,329...23,882,322
Ensembl chrNW_004955403:23,878,329...23,882,322
JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in ISO (PMID:31618756) UniProt PMID:31618756 NCBI chrNW_004955534:497,518...500,309
Ensembl chrNW_004955534:496,933...510,934
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO PMID:29934347 UniProt PMID:29934347 RGD:405650300 NCBI chrNW_004955442:16,521,130...16,523,733
Ensembl chrNW_004955442:16,521,130...16,523,468
JBrowse link
G Ube2a ubiquitin conjugating enzyme E2 A involved_in ISO (PMID:23685073) UniProt PMID:23685073 NCBI chrNW_004955534:411,602...485,964
Ensembl chrNW_004955534:409,947...421,888
JBrowse link
G Vps13d vacuolar protein sorting 13 homolog D involved_in ISO (PMID:29307555) UniProt PMID:29307555 NCBI chrNW_004955486:1,515,630...1,772,107
Ensembl chrNW_004955486:1,513,712...1,767,956
JBrowse link
positive regulation of reticulophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISO (PMID:36543799)
(PMID:32851973)
UniProt PMID:32851973 PMID:36543799 NCBI chrNW_004955451:13,160,811...13,170,012
Ensembl chrNW_004955451:13,120,761...13,170,073
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:36543799) UniProt PMID:36543799 NCBI chrNW_004955415:14,085,404...14,098,220
Ensembl chrNW_004955415:14,085,404...14,098,856
JBrowse link
G Ufl1 UFM1 specific ligase 1 involved_in ISO (PMID:36543799) UniProt PMID:36543799 NCBI chrNW_004955411:22,548,139...22,577,287
Ensembl chrNW_004955411:22,548,219...22,580,903
JBrowse link
positive regulation of type 2 mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) ParkinsonsUK-UCL PMID:24005319 NCBI chrNW_004955452:7,372,917...7,375,072
Ensembl chrNW_004955452:7,373,001...7,375,856
JBrowse link
G Cdc37 cell division cycle 37, HSP90 cochaperone involved_in ISO (PMID:21855797) ParkinsonsUK-UCL PMID:21855797 NCBI chrNW_004955495:1,642,467...1,651,288
Ensembl chrNW_004955495:1,641,236...1,651,288
JBrowse link
G Gba1 glucosylceramidase beta 1 acts_upstream_of_or_within ISO (PMID:23707074) ARUK-UCL PMID:23707074 NCBI chrNW_004955545:1,682,097...1,689,373
Ensembl chrNW_004955545:1,682,097...1,689,376
JBrowse link
G Hdac6 histone deacetylase 6 involved_in ISO (PMID:20457763) ParkinsonsUK-UCL PMID:20457763 NCBI chrNW_004955543:348,314...378,391
Ensembl chrNW_004955543:348,019...378,071
JBrowse link
G Hk2 hexokinase 2 involved_in ISO (PMID:23962723) ParkinsonsUK-UCL PMID:23962723 NCBI chrNW_004955424:10,897,528...10,966,025
Ensembl chrNW_004955424:10,897,485...10,966,025
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in ISO (PMID:30217973) CACAO PMID:30217973 NCBI chrNW_004955475:550,643...671,771
Ensembl chrNW_004955475:551,159...671,747
JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in ISO (PMID:24709290) ParkinsonsUK-UCL PMID:24709290 NCBI chrNW_004955452:1,059,168...1,066,096
Ensembl chrNW_004955452:1,058,930...1,066,096
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:20871098) ParkinsonsUK-UCL PMID:20871098 NCBI chrNW_004955452:1,171,115...1,186,338
Ensembl chrNW_004955452:1,171,205...1,185,125
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:20457763)
(PMID:20871098), (PMID:23212910)
ParkinsonsUK-UCL PMID:20457763 PMID:20871098 PMID:23212910 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Tomm7 translocase of outer mitochondrial membrane 7 involved_in ISO (PMID:24270810) ParkinsonsUK-UCL PMID:24270810 NCBI chrNW_004955410:25,157,860...25,166,898
Ensembl chrNW_004955410:25,157,860...25,166,898
JBrowse link
G Vdac1 voltage dependent anion channel 1 involved_in ISO (PMID:32047033) UniProt PMID:32047033 NCBI chrNW_004955408:5,260,444...5,275,972
Ensembl chrNW_004955408:5,260,353...5,275,990
JBrowse link
positive regulation of xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irgm immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chrNW_004955408:2,338,510...2,344,566 JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:23245322) GO_Central PMID:23245322 NCBI chrNW_004955419:1,121,127...1,154,356
Ensembl chrNW_004955419:1,121,127...1,154,356
JBrowse link
G Mapk3 mitogen-activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004955493:6,870,699...6,876,836
Ensembl chrNW_004955493:6,869,668...6,879,152
JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004955410:31,681,191...31,725,173
Ensembl chrNW_004955410:31,681,077...31,725,173
JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004955433:8,746,213...8,780,119
Ensembl chrNW_004955433:8,746,004...8,782,710
JBrowse link
G Optn optineurin involved_in ISO (PMID:21617041) ParkinsonsUK-UCL PMID:21617041 NCBI chrNW_004955462:1,098,118...1,150,291
Ensembl chrNW_004955462:1,107,510...1,151,269
JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004955417:6,669,675...6,698,142
Ensembl chrNW_004955417:6,669,675...6,702,228
JBrowse link
G Rnf31 ring finger protein 31 involved_in ISO (PMID:28481331) UniProt PMID:28481331 NCBI chrNW_004955409:36,240,008...36,252,166
Ensembl chrNW_004955409:36,240,008...36,252,166
JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:21617041) ParkinsonsUK-UCL PMID:21617041 NCBI chrNW_004955458:11,210,120...11,263,632
Ensembl chrNW_004955458:11,211,398...11,263,867
JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:22033934) MGI PMID:22033934 NCBI chrNW_004955471:8,011,710...8,019,063
Ensembl chrNW_004955471:8,014,910...8,017,258
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12561
    cellular process 12000
      process utilizing autophagic mechanism 460
        autophagy 460
          macroautophagy 289
            positive regulation of macroautophagy 94
              positive regulation of aggrephagy 6
              positive regulation of autophagosome assembly 20
              positive regulation of autophagosome maturation 7
              positive regulation of lipophagy 5
              positive regulation of mitophagy + 25
              positive regulation of reticulophagy 3
              positive regulation of xenophagy 10
Path 2
Term Annotations click to browse term
  biological_process 12561
    biological regulation 9079
      regulation of biological process 8773
        positive regulation of biological process 5700
          positive regulation of cellular process 5441
            positive regulation of metabolic process 3253
              positive regulation of catabolic process 495
                positive regulation of autophagy 156
                  positive regulation of macroautophagy 94
                    positive regulation of aggrephagy 6
                    positive regulation of autophagosome assembly 20
                    positive regulation of autophagosome maturation 7
                    positive regulation of lipophagy 5
                    positive regulation of mitophagy + 25
                    positive regulation of reticulophagy 3
                    positive regulation of xenophagy 10
paths to the root