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ONTOLOGY REPORT - ANNOTATIONS


Term:aggresome
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Accession:GO:0016235 term browser browse the term
Definition:An inclusion body formed by dynein-dependent retrograde transport of an aggregated protein on microtubules.
Synonyms:xref: Wikipedia:Aggresome



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aggresome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cabin1 calcineurin binding protein 1 located_in ISO RGD GO_REF:0000052 NCBI chr20:12,893,314...13,015,357
Ensembl chr20:12,893,358...13,015,357
JBrowse link
G Card14 caspase recruitment domain family, member 14 located_in ISO RGD GO_REF:0000052 NCBI chr10:104,572,059...104,601,606
Ensembl chr10:104,566,424...104,601,905
JBrowse link
G Clu clusterin IDA RGD PMID:12799419 RGD:1582417 NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
JBrowse link
G Cpne1 copine 1 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr 3:144,587,548...144,629,603
Ensembl chr 3:144,588,995...144,598,636
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr10:54,723,356...54,732,823
Ensembl chr10:54,723,411...54,732,820
JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr 4:141,797,631...141,829,717
Ensembl chr 4:141,797,701...141,829,717
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 located_in ISO RGD GO_REF:0000052 NCBI chr 7:8,533,248...8,538,518
Ensembl chr 7:8,533,116...8,559,183
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 located_in ISO (PMID:16159959) RGD PMID:16159959 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 5:145,189,814...145,219,571
Ensembl chr 5:145,189,841...145,217,326
JBrowse link
G Hdac6 histone deacetylase 6 located_in ISO
IEA
(PMID:14675537)
GO_REF:0000107
RGD
Ensembl
PMID:14675537 GO_REF:0000107 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441
JBrowse link
G Hoxc9 homeobox C9 located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 7:134,118,817...134,121,497
Ensembl chr 7:134,118,817...134,121,492
JBrowse link
G Hoxd3 homeo box D3 located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 3:59,638,708...59,650,282
Ensembl chr 3:59,638,708...59,650,282
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A located_in ISO (PMID:15885686) RGD PMID:15885686
G Hspa1b heat shock protein family A (Hsp70) member 1B located_in ISO (PMID:15885686) RGD PMID:15885686 NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240
JBrowse link
G Hspb7 heat shock protein family B (small) member 7 located_in ISO RGD GO_REF:0000052 NCBI chr 5:153,727,782...153,731,268
Ensembl chr 5:153,727,588...153,731,266
JBrowse link
G Klf8 Kruppel-like factor 8 located_in ISO RGD GO_REF:0000052 NCBI chr  X:17,950,045...18,132,980
Ensembl chr  X:17,958,843...18,133,182
JBrowse link
G Klhl14 kelch-like family member 14 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr18:12,804,253...12,917,828
Ensembl chr18:12,804,253...12,917,828
JBrowse link
G Pold1 DNA polymerase delta 1, catalytic subunit located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 1:95,025,462...95,041,559
Ensembl chr 1:95,025,499...95,036,465
JBrowse link
G Prdm16 PR/SET domain 16 located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 5:164,879,864...165,203,986
Ensembl chr 5:164,880,587...165,203,601
JBrowse link
G Prkcq protein kinase C, theta located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr17:67,246,394...67,379,049
Ensembl chr17:67,246,394...67,378,704
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase located_in ISO
ISS
(PMID:14645198)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:14645198 GO_REF:0000024 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
JBrowse link
G Psap prosaposin located_in ISO (MGI:4819645|PMID:20498017) RGD PMID:20498017 MGI:4819645 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Psen1 presenilin 1 located_in ISS
ISO
GO_REF:0000024
(PMID:21143716)
UniProt
RGD
PMID:21143716 GO_REF:0000024 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Rangap1 RAN GTPase activating protein 1 located_in ISO RGD GO_REF:0000052 NCBI chr 7:113,224,695...113,250,441
Ensembl chr 7:113,224,703...113,250,438
JBrowse link
G Rbm12 RNA binding motif protein 12 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:144,587,548...144,629,950
Ensembl chr 3:144,611,623...144,629,915
JBrowse link
G Rnf32 ring finger protein 32 located_in ISO (PMID:11890671) RGD PMID:11890671 NCBI chr 4:6,144,749...6,209,320
Ensembl chr 4:6,149,841...6,209,257
JBrowse link
G Sfmbt2 Scm-like with four mbt domains 2 located_in ISO RGD GO_REF:0000052 NCBI chr17:67,934,296...68,128,905
Ensembl chr17:67,935,904...68,128,781
JBrowse link
G Sqstm1 sequestosome 1 located_in
is_active_in
ISO
IBA
(MGI:5446594|PMID:22792322)
PMID:21873635
RGD PMID:22792322 PMID:21873635 MGI:5446594, RGD:13792537 NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
JBrowse link
G Stradb STE20 related adaptor beta located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 9:60,414,182...60,433,084
Ensembl chr 9:60,414,182...60,433,084
JBrowse link
G Tdp2 tyrosyl-DNA phosphodiesterase 2 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr17:40,228,943...40,240,337
Ensembl chr17:40,228,947...40,240,313
JBrowse link
G Trim37 tripartite motif-containing 37 located_in
is_active_in
ISO
IBA
(PMID:15885686)
PMID:21873635
RGD PMID:15885686 PMID:21873635 RGD:13792537 NCBI chr10:71,943,384...72,075,567
Ensembl chr10:71,943,375...72,075,558
JBrowse link
G Trim50 tripartite motif-containing 50 located_in ISO (MGI:5446594|PMID:22792322) RGD PMID:22792322 MGI:5446594 NCBI chr12:21,300,784...21,317,668
Ensembl chr12:21,300,785...21,317,668
JBrowse link
G Trim66 tripartite motif-containing 66 located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 1:163,468,944...163,539,633
Ensembl chr 1:163,470,350...163,537,185
JBrowse link
G Ubd ubiquitin D located_in ISS
ISO
GO_REF:0000024
(PMID:19033385)
UniProt
RGD
PMID:19033385 GO_REF:0000024 NCBI chr20:1,385,487...1,387,438
Ensembl chr20:1,385,864...1,408,639
Ensembl chr20:1,385,864...1,408,639
JBrowse link
G Ubqln1 ubiquilin 1 located_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:16159959), (PMID:21143716)
Ensembl
UniProt
RGD
PMID:16159959 PMID:21143716 GO_REF:0000024 GO_REF:0000107 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Ucma upper zone of growth plate and cartilage matrix associated located_in ISO (MGI:4421086|PMID:19819238) RGD PMID:19819238 MGI:4421086 NCBI chr17:73,293,977...73,303,728
Ensembl chr17:73,293,978...73,303,611
JBrowse link
G Urb2 URB2 ribosome biogenesis homolog located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr19:52,011,019...52,036,607
Ensembl chr19:52,011,112...52,036,597
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 3:134,436,916...134,509,308
Ensembl chr 3:134,437,109...134,509,306
JBrowse link
G Zdhhc17 zinc finger DHHC-type palmitoyltransferase 17 located_in IEA
ISO
GO_REF:0000107 Ensembl
RGD
GO_REF:0000052 GO_REF:0000107 NCBI chr 7:46,369,963...46,433,691
Ensembl chr 7:46,369,988...46,433,764
JBrowse link
G Zfp161 zinc finger protein 161 located_in ISO
IEA
GO_REF:0000107 RGD
Ensembl
GO_REF:0000052 GO_REF:0000107 NCBI chr 9:109,333,440...109,338,646
Ensembl chr 9:109,331,028...109,338,632
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19187
    cellular anatomical entity 18928
      intracellular anatomical structure 14074
        inclusion body 84
          aggresome 40
paths to the root