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ONTOLOGY REPORT - ANNOTATIONS


Term:endosomal transport
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Accession:GO:0016197 term browser browse the term
Definition:The directed movement of substances mediated by an endosome, a membrane-bounded organelle that carries materials enclosed in the lumen or located in the endosomal membrane.
Synonyms:exact_synonym: endosome localisation
 related_synonym: endosome localization;   endosome transport
 alt_id: GO:0032439


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endosomal transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCA1 ATP binding cassette subfamily A member 1 JBrowse link 9 75,948,831 76,096,136 RGD:9068941
G AGAP2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 JBrowse link 12 31,187,821 31,201,594 RGD:9068941
G ALMS1 ALMS1 centrosome and basal body associated protein JBrowse link 2A 73,438,657 73,671,313 RGD:9068941
G ALS2 alsin Rho guanine nucleotide exchange factor ALS2 JBrowse link 2B 88,954,167 89,034,764 RGD:9068941
G ANKFY1 ankyrin repeat and FYVE domain containing 1 JBrowse link 17 4,217,880 4,316,017 RGD:9068941
G AP5B1 adaptor related protein complex 5 subunit beta 1 JBrowse link 11 61,132,012 61,139,078 RGD:9068941
G AP5M1 adaptor related protein complex 5 subunit mu 1 JBrowse link 14 37,839,766 37,869,926 RGD:9068941
G AP5Z1 adaptor related protein complex 5 subunit zeta 1 JBrowse link 7 5,027,987 5,044,215 RGD:9068941
G ARHGAP1 Rho GTPase activating protein 1 JBrowse link 11 46,626,174 46,651,308 RGD:9068941
G ARL8B ADP ribosylation factor like GTPase 8B JBrowse link 3 5,069,592 5,127,301 RGD:9068941
G CORO1C coronin 1C JBrowse link 12 106,220,755 106,306,098 RGD:9068941
G DPY30 dpy-30 histone methyltransferase complex regulatory subunit JBrowse link 2A 32,044,604 32,060,204 RGD:9068941
G EHD1 EH domain containing 1 JBrowse link 11 60,208,840 60,236,513 RGD:9068941
G HTT huntingtin JBrowse link 4 3,215,081 3,388,587 RGD:9068941
G KIAA1109 KIAA1109 ortholog JBrowse link 4 114,346,807 114,558,993 RGD:9068941
G LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 JBrowse link 11 67,177,580 67,183,631 RGD:9068941
G LOC100994374 uncharacterized LOC100994374 JBrowse link 12 117,670,697 117,672,876 RGD:9068941
G LRP2 LDL receptor related protein 2 JBrowse link 2B 56,407,871 56,640,471 RGD:9068941
G MX1 MX dynamin like GTPase 1 JBrowse link 21 27,756,768 27,795,307 RGD:9068941
G MYO5B myosin VB JBrowse link 18 43,207,387 43,575,951 RGD:9068941
G NSG1 neuronal vesicle trafficking associated 1 RGD:9068941
G PICALM phosphatidylinositol binding clathrin assembly protein JBrowse link 11 81,011,324 81,122,352 RGD:9068941
G RAB10 RAB10, member RAS oncogene family JBrowse link 2A 26,034,046 26,132,658 RGD:9068941
G RAB13 RAB13, member RAS oncogene family JBrowse link 1 129,338,524 129,343,234 RGD:9068941
G SNAP25 synaptosome associated protein 25 JBrowse link 20 10,164,236 10,252,856 RGD:9068941
G SNX1 sorting nexin 1 JBrowse link 15 43,048,974 43,096,544 RGD:9068941
G SNX18 sorting nexin 18 JBrowse link 5 59,270,053 59,508,359 RGD:9068941
G SNX27 sorting nexin 27 JBrowse link 1 126,968,370 127,052,942 RGD:9068941
G SNX33 sorting nexin 33 JBrowse link 15 54,556,304 54,570,683 RGD:9068941
G SNX9 sorting nexin 9 JBrowse link 6 155,724,026 155,844,553 RGD:9068941
G TMCC1 transmembrane and coiled-coil domain family 1 JBrowse link 3 126,705,270 126,955,798 RGD:9068941
G VPS4A vacuolar protein sorting 4 homolog A JBrowse link 16 49,685,827 49,699,542 RGD:9068941
G VPS4B vacuolar protein sorting 4 homolog B JBrowse link 18 56,749,439 56,782,660 RGD:9068941
G WAS WASP actin nucleation promoting factor JBrowse link X 40,982,132 40,989,767 RGD:9068941
G WASHC4 WASH complex subunit 4 JBrowse link 12 102,689,904 102,751,220 RGD:9068941
G ZFYVE16 zinc finger FYVE-type containing 16 JBrowse link 5 34,837,410 34,910,416 RGD:9068941
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BTBD8 BTB domain containing 8 JBrowse link 1 94,739,780 94,843,172 RGD:9068941
early endosome to Golgi transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EHD3 EH domain containing 3 JBrowse link 2A 31,245,908 31,280,485 RGD:9068941
G LMAN1 lectin, mannose binding 1 JBrowse link 18 52,722,735 52,754,013 RGD:9068941
G RAB6A RAB6A, member RAS oncogene family JBrowse link 11 68,751,163 68,837,324 RGD:9068941
G RBSN rabenosyn, RAB effector JBrowse link 3 14,994,647 15,023,733 RGD:9068941
G SNX1 sorting nexin 1 JBrowse link 15 43,048,974 43,096,544 RGD:9068941
G SNX8 sorting nexin 8 JBrowse link 7 2,521,267 2,579,535 RGD:9068941
G STX10 syntaxin 10 JBrowse link 19 12,707,389 12,713,681 RGD:9068941
G STX5 syntaxin 5 JBrowse link 11 58,162,269 58,187,427 RGD:9068941
G SURF4 surfeit 4 JBrowse link 9 104,484,792 104,499,508 RGD:9068941
G TMED9 transmembrane p24 trafficking protein 9 JBrowse link 5 172,897,814 172,901,789 RGD:9068941
endocytic recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 JBrowse link 3 192,577,813 192,750,435 RGD:9068941
G ARF6 ADP ribosylation factor 6 JBrowse link 14 30,482,191 30,486,741 RGD:9068941
G ARL4C ADP ribosylation factor like GTPase 4C JBrowse link 2B 121,736,581 121,740,627 RGD:9068941
G CCDC22 coiled-coil domain containing 22 JBrowse link X 41,535,439 41,550,547 RGD:9068941
G CCDC93 coiled-coil domain containing 93 JBrowse link 2B 4,873,566 4,972,556 RGD:9068941
G CMTM6 CKLF like MARVEL transmembrane domain containing 6 JBrowse link 3 32,399,143 32,420,753 RGD:9068941
G DENND1A DENN domain containing 1A JBrowse link 9 94,511,281 95,053,490 RGD:9068941
G DENND1B DENN domain containing 1B JBrowse link 1 173,102,371 173,365,024 RGD:9068941
G EHD1 EH domain containing 1 JBrowse link 11 60,208,840 60,236,513 RGD:9068941
G EHD2 EH domain containing 2 JBrowse link 19 44,707,747 44,737,370 RGD:9068941
G EHD3 EH domain containing 3 JBrowse link 2A 31,245,908 31,280,485 RGD:9068941
G EHD4 EH domain containing 4 JBrowse link 15 20,840,517 20,926,900 RGD:9068941
G EIPR1 EARP complex and GARP complex interacting protein 1 JBrowse link 2A 3,210,030 3,386,505 RGD:9068941
G EPG5 ectopic P-granules autophagy protein 5 homolog JBrowse link 18 39,129,678 39,250,418 RGD:9068941
G EPS15 epidermal growth factor receptor pathway substrate 15 JBrowse link 1 50,598,692 50,763,585 RGD:9068941
G FCGR2B Fc fragment of IgG receptor IIb JBrowse link 1 137,074,342 137,090,962 RGD:9068941
G GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 JBrowse link 17 69,185,045 69,208,766 RGD:9068941
G KIAA1109 KIAA1109 ortholog JBrowse link 4 114,346,807 114,558,993 RGD:9068941
G LMTK2 lemur tyrosine kinase 2 JBrowse link 7 6,312,634 6,415,332 RGD:9068941
G LOC100968477 VPS53 subunit of GARP complex JBrowse link 17 400,048 576,119 RGD:9068941
G MICALL2 MICAL like 2 JBrowse link 7 1,676,677 1,708,475 RGD:9068941
G PTPN23 protein tyrosine phosphatase non-receptor type 23 JBrowse link 3 47,280,706 47,314,268 RGD:9068941
G RAB11FIP3 RAB11 family interacting protein 3 RGD:9068941
G RAB13 RAB13, member RAS oncogene family JBrowse link 1 129,338,524 129,343,234 RGD:9068941
G RAB14 RAB14, member RAS oncogene family JBrowse link 9 92,305,656 92,329,419 RGD:9068941
G RAB17 RAB17, member RAS oncogene family JBrowse link 2B 124,802,789 124,820,775 RGD:9068941
G RAB8A RAB8A, member RAS oncogene family JBrowse link 19 15,598,029 15,619,988 RGD:9068941
G SLC18A2 solute carrier family 18 member A2 JBrowse link 10 113,823,005 113,862,451 RGD:9068941
G SNF8 SNF8 subunit of ESCRT-II JBrowse link 17 8,595,647 8,609,730 RGD:9068941
G SNX17 sorting nexin 17 JBrowse link 2A 27,374,340 27,380,999 RGD:9068941
G SNX4 sorting nexin 4 JBrowse link 3 122,578,527 122,652,007 RGD:9068941
G STX6 syntaxin 6 JBrowse link 1 156,450,202 156,500,143 RGD:9068941
G VPS26C VPS26 endosomal protein sorting factor C JBrowse link 21 23,587,160 23,632,510 RGD:9068941
G VPS29 VPS29 retromer complex component JBrowse link 12 108,061,372 108,071,994 RGD:9068941
G VPS35L VPS35 endosomal protein sorting factor like JBrowse link 16 18,611,371 18,756,113 RGD:9068941
G VPS50 VPS50 subunit of EARP/GARPII complex JBrowse link 7 85,188,960 85,315,452 RGD:9068941
G VPS51 VPS51 subunit of GARP complex JBrowse link 11 60,452,483 60,474,049 RGD:9068941
G VPS52 VPS52 subunit of GARP complex JBrowse link 6 32,822,394 32,844,120 RGD:9068941
endosome to lysosome transport via multivesicular body sorting pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LYST lysosomal trafficking regulator JBrowse link 1 211,229,800 211,451,947 RGD:9068941
G UBXN6 UBX domain protein 6 JBrowse link 19 3,463,259 3,475,428 RGD:9068941
G VCP valosin containing protein JBrowse link 9 34,907,147 34,923,227 RGD:9068941
G VPS4B vacuolar protein sorting 4 homolog B JBrowse link 18 56,749,439 56,782,660 RGD:9068941
endosome to plasma membrane protein transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SNX27 sorting nexin 27 JBrowse link 1 126,968,370 127,052,942 RGD:9068941
G TRARG1 trafficking regulator of GLUT4 (SLC2A4) 1 JBrowse link 17 1,262,220 1,286,565 RGD:9068941
endosome transport via multivesicular body sorting pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DENND10 DENN domain containing 10 JBrowse link 10 115,677,737 115,708,548 RGD:9068941
G LAPTM4B lysosomal protein transmembrane 4 beta JBrowse link 8 94,414,275 94,491,483 RGD:9068941
G RILP Rab interacting lysosomal protein JBrowse link 17 1,631,518 1,635,464 RGD:9068941
G SORT1 sortilin 1 JBrowse link 1 111,687,119 111,775,339 RGD:9068941
late endosome to Golgi transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GCC2 GRIP and coiled-coil domain containing 2 JBrowse link 2A 94,659,117 94,721,491 RGD:9068941
G RAB7B RAB7B, member RAS oncogene family JBrowse link 1 181,584,814 181,611,831 RGD:9068941
G SGSM2 small G protein signaling modulator 2 JBrowse link 17 2,328,517 2,372,408 RGD:9068941
multivesicular body-lysosome fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC100970314 charged multivesicular body protein 3 JBrowse link 2A 86,559,695 86,619,615 RGD:9068941
negative regulation of endocytic recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARHGAP1 Rho GTPase activating protein 1 JBrowse link 11 46,626,174 46,651,308 RGD:9068941
negative regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARFIP1 ADP ribosylation factor interacting protein 1 JBrowse link 4 145,119,881 145,252,601 RGD:9068941
neurotransmitter receptor transport, endosome to plasma membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MYO5B myosin VB JBrowse link 18 43,207,387 43,575,951 RGD:9068941
G VPS35 VPS35 retromer complex component JBrowse link 16 26,924,901 26,954,443 RGD:9068941
neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARHGAP44 Rho GTPase activating protein 44 JBrowse link 17 38,657,824 38,859,591 RGD:9068941
G GRIP1 glutamate receptor interacting protein 1 JBrowse link 12 21,841,611 22,562,418 RGD:9068941
G GRIP2 glutamate receptor interacting protein 2 JBrowse link 3 14,411,825 14,525,388 RGD:9068941
G GRIPAP1 GRIP1 associated protein 1 JBrowse link X 41,271,762 41,300,327 RGD:9068941
G NSG1 neuronal vesicle trafficking associated 1 RGD:9068941
G RAB11A RAB11A, member RAS oncogene family JBrowse link 15 44,810,880 44,833,438 RGD:9068941
G RAB8A RAB8A, member RAS oncogene family JBrowse link 19 15,598,029 15,619,988 RGD:9068941
G SCRIB scribble planar cell polarity protein JBrowse link 8 140,544,797 140,571,078 RGD:9068941
G VPS35 VPS35 retromer complex component JBrowse link 16 26,924,901 26,954,443 RGD:9068941
positive regulation of endocytic recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACTN2 actinin alpha 2 JBrowse link 1 212,245,742 212,323,387 RGD:9068941
G EHD1 EH domain containing 1 JBrowse link 11 60,208,840 60,236,513 RGD:9068941
G EHD2 EH domain containing 2 JBrowse link 19 44,707,747 44,737,370 RGD:9068941
G EIPR1 EARP complex and GARP complex interacting protein 1 JBrowse link 2A 3,210,030 3,386,505 RGD:9068941
G PLA2G4E phospholipase A2 group IVE JBrowse link 15 20,937,573 20,975,388 RGD:9068941
G SORL1 sortilin related receptor 1 JBrowse link 11 116,297,014 116,477,399 RGD:9068941
positive regulation of endosome to plasma membrane protein transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AKAP5 A-kinase anchoring protein 5 JBrowse link 14 45,045,476 45,050,946 RGD:9068941
G COMMD1 copper metabolism domain containing 1 JBrowse link 2A 61,970,830 62,216,677 RGD:9068941
G ZDHHC2 zinc finger DHHC-type palmitoyltransferase 2 JBrowse link 8 16,368,954 16,437,623 RGD:9068941
positive regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G EIPR1 EARP complex and GARP complex interacting protein 1 JBrowse link 2A 3,210,030 3,386,505 RGD:9068941
recycling endosome to Golgi transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GCC2 GRIP and coiled-coil domain containing 2 JBrowse link 2A 94,659,117 94,721,491 RGD:9068941
G TBC1D14 TBC1 domain family member 14 RGD:9068941
regulation of endocytic recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BVES blood vessel epicardial substance JBrowse link 6 102,915,148 102,951,141 RGD:9068941
G INPP5F inositol polyphosphate-5-phosphatase F JBrowse link 10 116,295,802 116,396,764 RGD:9068941
G NDRG4 NDRG family member 4 JBrowse link 16 38,729,616 38,780,173 RGD:9068941
G PLA2G3 phospholipase A2 group III JBrowse link 22 12,158,589 12,164,441 RGD:9068941
G RAB11B RAB11B, member RAS oncogene family JBrowse link 19 7,676,095 7,690,177 RGD:9068941
regulation of multivesicular body size involved in endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G SNF8 SNF8 subunit of ESCRT-II JBrowse link 17 8,595,647 8,609,730 RGD:9068941
regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARHGAP44 Rho GTPase activating protein 44 JBrowse link 17 38,657,824 38,859,591 RGD:9068941
G GRIPAP1 GRIP1 associated protein 1 JBrowse link X 41,271,762 41,300,327 RGD:9068941
G TAMALIN trafficking regulator and scaffold protein tamalin JBrowse link 12 36,747,159 36,755,812 RGD:9068941
regulation of recycling endosome localization within postsynapse term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G GRIPAP1 GRIP1 associated protein 1 JBrowse link X 41,271,762 41,300,327 RGD:9068941
regulation of retrograde transport, endosome to Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LRRK2 leucine rich repeat kinase 2 JBrowse link 12 48,343,621 48,488,337 RGD:9068941
G RAB29 RAB29, member RAS oncogene family JBrowse link 1 181,377,018 181,384,496 RGD:9068941
retrograde transport, endosome to Golgi term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANKFY1 ankyrin repeat and FYVE domain containing 1 JBrowse link 17 4,217,880 4,316,017 RGD:9068941
G AP1S1 adaptor related protein complex 1 subunit sigma 1 JBrowse link 7 93,294,826 93,301,202 RGD:9068941
G ARFRP1 ADP ribosylation factor related protein 1 RGD:9068941
G ARL1 ADP ribosylation factor like GTPase 1 JBrowse link 12 98,981,212 98,994,344 RGD:9068941
G BAIAP3 BAI1 associated protein 3 RGD:9068941
G BET1L Bet1 golgi vesicular membrane trafficking protein like JBrowse link 11 197,901 203,307 RGD:9068941
G CLN5 CLN5 intracellular trafficking protein JBrowse link 13 58,207,542 58,220,697 RGD:9068941
G CLTC clathrin heavy chain JBrowse link 17 53,685,865 53,761,008 RGD:9068941
G CLTCL1 clathrin heavy chain like 1 JBrowse link 22 1,934,948 2,050,159 RGD:9068941
G DCTN1 dynactin subunit 1 JBrowse link 2A 74,428,060 74,458,574 RGD:9068941
G DENND2A DENN domain containing 2A JBrowse link 7 132,452,770 132,573,674 RGD:9068941
G DENND5A DENN domain containing 5A JBrowse link 11 9,267,037 9,395,677 RGD:9068941
G ERC1 ELKS/RAB6-interacting/CAST family member 1 JBrowse link 12 1,066,034 1,597,562 RGD:9068941
G EVI5 ecotropic viral integration site 5 JBrowse link 1 95,172,856 95,457,699 RGD:9068941
G GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 JBrowse link 10 98,849,000 98,986,443 RGD:9068941
G GCC2 GRIP and coiled-coil domain containing 2 JBrowse link 2A 94,659,117 94,721,491 RGD:9068941
G GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 JBrowse link 22 18,526,456 18,551,640 RGD:9068941
G GOSR1 golgi SNAP receptor complex member 1 JBrowse link 17 26,248,771 26,293,872 RGD:9068941
G LOC100968477 VPS53 subunit of GARP complex JBrowse link 17 400,048 576,119 RGD:9068941
G MAGEL2 MAGE family member L2 JBrowse link 15 6,017,523 6,021,849 RGD:9068941
G PHETA1 PH domain containing endocytic trafficking adaptor 1 JBrowse link 12 108,928,091 108,936,858 RGD:9068941
G PHETA2 PH domain containing endocytic trafficking adaptor 2 JBrowse link 22 22,964,383 22,972,840 RGD:9068941
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing JBrowse link 2B 95,505,376 95,597,792 RGD:9068941
G PREPL prolyl endopeptidase like JBrowse link 2A 44,417,735 44,463,542 RGD:9068941
G RAB29 RAB29, member RAS oncogene family JBrowse link 1 181,377,018 181,384,496 RGD:9068941
G RAB7A RAB7A, member RAS oncogene family JBrowse link 3 125,784,604 125,873,051 RGD:9068941
G RGP1 RGP1 homolog, RAB6A GEF complex partner 1 JBrowse link 9 35,600,213 35,641,371 RGD:9068941
G RHOBTB3 Rho related BTB domain containing 3 JBrowse link 5 19,552,740 19,618,055 RGD:9068941
G RIC1 RIC1 homolog, RAB6A GEF complex partner 1 JBrowse link 9 5,449,982 5,598,891 RGD:9068941
G SNX1 sorting nexin 1 JBrowse link 15 43,048,974 43,096,544 RGD:9068941
G SNX2 sorting nexin 2 JBrowse link 5 118,165,097 118,221,620 RGD:9068941
G SNX5 sorting nexin 5 JBrowse link 20 17,901,450 17,928,664 RGD:9068941
G SNX6 sorting nexin 6 JBrowse link 14 15,319,526 15,388,326 RGD:9068941
G SPAG9 sperm associated antigen 9 JBrowse link 17 45,053,292 45,211,488 RGD:9068941
G STX10 syntaxin 10 JBrowse link 19 12,707,389 12,713,681 RGD:9068941
G STX16 syntaxin 16 JBrowse link 20 54,999,514 55,027,787 RGD:9068941
G STX5 syntaxin 5 JBrowse link 11 58,162,269 58,187,427 RGD:9068941
G STX6 syntaxin 6 JBrowse link 1 156,450,202 156,500,143 RGD:9068941
G TBC1D10A TBC1 domain family member 10A JBrowse link 22 11,328,159 11,363,009 RGD:9068941
G TBC1D10B TBC1 domain family member 10B JBrowse link 16 24,599,204 24,612,612 RGD:9068941
G TBC1D10C TBC1 domain family member 10C JBrowse link 11 62,762,075 62,768,569 RGD:9068941
G TBC1D17 TBC1 domain family member 17 JBrowse link 19 46,890,557 46,901,761 RGD:9068941
G TBC1D23 TBC1 domain family member 23 JBrowse link 3 97,353,716 97,418,083 RGD:9068941
G TBC1D5 TBC1 domain family member 5 JBrowse link 3 17,080,589 17,664,776 RGD:9068941
G TMEM87A transmembrane protein 87A JBrowse link 15 21,164,958 21,227,644 RGD:9068941
G TMEM87B transmembrane protein 87B JBrowse link 2A 89,890,335 89,951,632 RGD:9068941
G TRIM27 tripartite motif containing 27 JBrowse link 6 28,722,505 28,743,484 RGD:9068941
G UBE2O ubiquitin conjugating enzyme E2 O JBrowse link 17 70,337,622 70,400,967 RGD:9068941
G VAMP3 vesicle associated membrane protein 3 JBrowse link 1 6,534,115 6,544,275 RGD:9068941
G VPS26A VPS26, retromer complex component A JBrowse link 10 65,591,415 65,639,894 RGD:9068941
G VPS26B VPS26, retromer complex component B JBrowse link 11 129,077,964 129,100,936 RGD:9068941
G VPS35 VPS35 retromer complex component JBrowse link 16 26,924,901 26,954,443 RGD:9068941
G VPS50 VPS50 subunit of EARP/GARPII complex JBrowse link 7 85,188,960 85,315,452 RGD:9068941
G VPS51 VPS51 subunit of GARP complex JBrowse link 11 60,452,483 60,474,049 RGD:9068941
G VPS54 VPS54 subunit of GARP complex JBrowse link 2A 63,959,930 64,087,102 RGD:9068941
G VTI1A vesicle transport through interaction with t-SNAREs 1A JBrowse link 10 109,037,834 109,539,019 RGD:9068941
G YKT6 YKT6 v-SNARE homolog JBrowse link 7 44,915,181 44,928,001 RGD:9068941
retrograde transport, endosome to plasma membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ANKRD27 ankyrin repeat domain 27 JBrowse link 19 29,516,853 29,594,519 RGD:9068941
G ANKRD50 ankyrin repeat domain 50 JBrowse link 4 116,841,161 116,889,221 RGD:9068941
G CCDC22 coiled-coil domain containing 22 JBrowse link X 41,535,439 41,550,547 RGD:9068941
G CCDC93 coiled-coil domain containing 93 JBrowse link 2B 4,873,566 4,972,556 RGD:9068941
G ENTR1 endosome associated trafficking regulator 1 JBrowse link 9 107,474,676 107,483,625 RGD:9068941
G MICALL1 MICAL like 1 JBrowse link 22 18,821,562 18,857,261 RGD:9068941
G RAB11B RAB11B, member RAS oncogene family JBrowse link 19 7,676,095 7,690,177 RGD:9068941
G SNX17 sorting nexin 17 JBrowse link 2A 27,374,340 27,380,999 RGD:9068941
G SNX27 sorting nexin 27 JBrowse link 1 126,968,370 127,052,942 RGD:9068941
G VPS26A VPS26, retromer complex component A JBrowse link 10 65,591,415 65,639,894 RGD:9068941
G VPS26C VPS26 endosomal protein sorting factor C JBrowse link 21 23,587,160 23,632,510 RGD:9068941
G VPS29 VPS29 retromer complex component JBrowse link 12 108,061,372 108,071,994 RGD:9068941
G VPS35 VPS35 retromer complex component JBrowse link 16 26,924,901 26,954,443 RGD:9068941
G VPS35L VPS35 endosomal protein sorting factor like JBrowse link 16 18,611,371 18,756,113 RGD:9068941
G VPS39 VPS39 subunit of HOPS complex JBrowse link 15 21,113,047 21,162,738 RGD:9068941
slow endocytic recycling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MICALL1 MICAL like 1 JBrowse link 22 18,821,562 18,857,261 RGD:9068941
synaptic vesicle budding from endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AP1S2 adaptor related protein complex 1 subunit sigma 2 JBrowse link X 8,449,885 8,478,932 RGD:9068941
G AP3B1 adaptor related protein complex 3 subunit beta 1 JBrowse link 5 37,015,518 37,305,769 RGD:9068941
G AP3D1 adaptor related protein complex 3 subunit delta 1 JBrowse link 19 1,110,419 1,161,826 RGD:9068941
G BTBD8 BTB domain containing 8 JBrowse link 1 94,739,780 94,843,172 RGD:9068941
synaptic vesicle recycling via endosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G BCL2L1 BCL2 like 1 JBrowse link 20 27,955,688 28,015,950 RGD:9068941
G BTBD8 BTB domain containing 8 JBrowse link 1 94,739,780 94,843,172 RGD:9068941
G DNM1L dynamin 1 like JBrowse link 12 53,476,553 53,541,421 RGD:9068941
synaptic vesicle to endosome fusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G STX12 syntaxin 12 JBrowse link 1 27,035,807 27,086,825 RGD:9068941
G STX6 syntaxin 6 JBrowse link 1 156,450,202 156,500,143 RGD:9068941
G VAMP4 vesicle associated membrane protein 4 JBrowse link 1 147,192,001 147,233,945 RGD:9068941
G VTI1A vesicle transport through interaction with t-SNAREs 1A JBrowse link 10 109,037,834 109,539,019 RGD:9068941
trans-Golgi network to recycling endosome transport term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RAB13 RAB13, member RAS oncogene family JBrowse link 1 129,338,524 129,343,234 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12489
    cellular process 11599
      vesicle-mediated transport 1137
        endosomal transport 173
          endocytic recycling + 48
          endosome transport via multivesicular body sorting pathway + 10
          retrograde transport, endosome to Golgi + 70
          retrograde transport, endosome to plasma membrane + 29
          synaptic vesicle endosomal processing + 11
          trans-Golgi network to recycling endosome transport 1
Path 2
Term Annotations click to browse term
  biological_process 12489
    localization 4915
      establishment of localization 3537
        establishment of localization in cell 1653
          intracellular transport 1060
            endosomal transport 173
              endocytic recycling + 48
              endosome transport via multivesicular body sorting pathway + 10
              retrograde transport, endosome to Golgi + 70
              retrograde transport, endosome to plasma membrane + 29
              synaptic vesicle endosomal processing + 11
              trans-Golgi network to recycling endosome transport 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.