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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle maturation
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Accession:GO:0016188 term browser browse the term
Definition:Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle.


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synaptic vesicle maturation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg4 discs large MAGUK scaffold protein 4 ISO
IEA
ISS
MGI:MGI:1915336 (MGI:MGI:3521633|PMID:15603741)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:15603741 GO_REF:0000024, GO_REF:0000107, MGI:MGI:3521633 NCBI chr10:56,625,845...56,655,543
Ensembl chr10:56,627,411...56,653,599
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein ISO
ISS
IEA
(MGI:MGI:5559661|PMID:22851330)
GO_REF:0000024
GO_REF:0000107
RGD
Alzheimers_University_of_Toronto
Ensembl
PMID:22851330 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5559661 NCBI chr 1:154,377,229...154,458,966
Ensembl chr 1:154,377,247...154,458,425
JBrowse link
G Rab3a RAB3A, member RAS oncogene family ISO MGI:MGI:3762127 (MGI:MGI:3762126|PMID:11359932) RGD PMID:11359932 MGI:MGI:3762126 NCBI chr16:20,435,098...20,439,206
Ensembl chr16:20,435,101...20,439,206
JBrowse link
G Snapin SNAP-associated protein ISO MGI:MGI:3608768 (MGI:MGI:4430710|PMID:19217378) RGD PMID:19217378 MGI:MGI:4430710 NCBI chr 2:189,878,159...189,880,743
Ensembl chr 2:189,878,168...189,880,743
JBrowse link
G Stxbp1 syntaxin binding protein 1 ISO MGI:MGI:2183278 (MGI:MGI:3046625|PMID:15145078) RGD PMID:15145078 MGI:MGI:3046625 NCBI chr 3:11,823,779...11,885,479
Ensembl chr 3:11,823,785...11,885,417
JBrowse link
G Unc13a unc-13 homolog A ISO
IBA
IEA
MGI:MGI:2449468 (MGI:MGI:1341485|PMID:10440375)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:10440375, PMID:21873635 GO_REF:0000107, MGI:MGI:1341485, RGD:13792537 NCBI chr16:20,056,398...20,103,951
Ensembl chr16:20,056,765...20,097,287
JBrowse link
G Unc13b unc-13 homolog B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:58,505,449...58,714,396
Ensembl chr 5:58,505,500...58,715,576
JBrowse link
G Unc13c unc-13 homolog C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:80,202,736...80,656,363
Ensembl chr 8:80,203,609...80,631,926
JBrowse link
G Zdhhc15 zinc finger DHHC-type palmitoyltransferase 15 ISO
IBA
MGI:MGI:1277959 (MGI:MGI:3521633|PMID:15603741)
PMID:21873635
RGD PMID:15603741, PMID:21873635 MGI:MGI:3521633, RGD:13792537 NCBI chr  X:75,433,957...75,566,531
Ensembl chr  X:75,439,778...75,566,481
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:54,932,546...55,002,322
Ensembl chr16:54,934,056...55,002,322
JBrowse link
synaptic vesicle lumen acidification term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 IC GO_REF:0000111 SynGO GO_REF:0000111 NCBI chr 4:115,417,100...115,435,754
Ensembl chr 4:115,416,580...115,437,206
JBrowse link
G Clcn3 chloride voltage-gated channel 3 ISO MGI:MGI:2447864 (MGI:MGI:2182197|PMID:11182090), (MGI:MGI:5006894|PMID:21378974) RGD PMID:11182090, PMID:21378974 MGI:MGI:2182197, MGI:MGI:5006894 NCBI chr16:32,448,821...32,520,649
Ensembl chr16:32,449,116...32,519,148
JBrowse link
G Slc17a7 solute carrier family 17 member 7 ISO MGI:MGI:3051945 (MGI:MGI:3836822|PMID:19169251) RGD PMID:19169251 MGI:MGI:3836822 NCBI chr 1:101,161,265...101,172,292
Ensembl chr 1:101,161,252...101,173,174
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20017
    developmental process 6813
      developmental maturation 338
        synaptic vesicle maturation 13
          synaptic vesicle lumen acidification + 3
Path 2
Term Annotations click to browse term
  biological_process 20017
    cellular process 18791
      cellular component organization or biogenesis 6765
        cellular component organization 6509
          organelle organization 4072
            vesicle organization 295
              synaptic vesicle maturation 13
                synaptic vesicle lumen acidification + 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.