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ONTOLOGY REPORT - ANNOTATIONS


Term:synaptic vesicle maturation
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Accession:GO:0016188 term browser browse the term
Definition:Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle.



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synaptic vesicle maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg4 discs large MAGUK scaffold protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:1915336 (MGI:3521633|PMID:15603741)
GO_REF:0000024
Ensembl
RGD
BHF-UCL
PMID:15603741 GO_REF:0000024 GO_REF:0000107 MGI:3521633 NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5559661|PMID:22851330)
GO_REF:0000107
Alzheimers_University_of_Toronto
RGD
Ensembl
PMID:22851330 GO_REF:0000024 GO_REF:0000107 MGI:5559661 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Rab3a RAB3A, member RAS oncogene family acts_upstream_of_or_within ISO MGI:3762127 (MGI:3762126|PMID:11359932) RGD PMID:11359932 MGI:3762126 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336
JBrowse link
G Snapin SNAP-associated protein acts_upstream_of_or_within ISO MGI:3608768 (MGI:4430710|PMID:19217378) RGD PMID:19217378 MGI:4430710 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231
JBrowse link
G Stxbp1 syntaxin binding protein 1 acts_upstream_of_or_within ISO MGI:2183278 (MGI:3046625|PMID:15145078) RGD PMID:15145078 MGI:3046625 NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
JBrowse link
G Unc13a unc-13 homolog A involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:2449468 (MGI:1341485|PMID:10440375)
GO_REF:0000002
RGD
InterPro
PMID:10440375 PMID:21873635 GO_REF:0000002 MGI:1341485, RGD:13792537 NCBI chr16:18,336,229...18,381,811
Ensembl chr16:18,336,229...18,381,872
JBrowse link
G Unc13b unc-13 homolog B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926
JBrowse link
G Unc13c unc-13 homolog C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223
JBrowse link
G Zdhhc15 zinc finger DHHC-type palmitoyltransferase 15 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1277959 (MGI:3521633|PMID:15603741)
RGD PMID:15603741 PMID:21873635 MGI:3521633, RGD:13792537 NCBI chr  X:69,568,086...69,701,756
Ensembl chr  X:69,574,124...69,701,756
JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:51,808,465...51,878,060
Ensembl chr16:51,808,468...51,878,060
JBrowse link
synaptic vesicle lumen acidification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in IC GO_REF:0000111 SynGO GO_REF:0000111 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475
JBrowse link
G Clcn3 chloride voltage-gated channel 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2447864 (MGI:5006894|PMID:21378974)
(MGI:2182197|PMID:11182090)
Ensembl
RGD
PMID:11182090 PMID:21378974 GO_REF:0000107 MGI:2182197 MGI:5006894 NCBI chr16:29,127,419...29,200,133
Ensembl chr16:29,127,419...29,200,119
JBrowse link
G Slc17a7 solute carrier family 17 member 7 acts_upstream_of_or_within ISO MGI:3051945 (MGI:3836822|PMID:19169251) RGD PMID:19169251 MGI:3836822 NCBI chr 1:95,649,709...95,661,591
Ensembl chr 1:95,649,745...95,661,588
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19834
    developmental process 6965
      developmental maturation 363
        synaptic vesicle maturation 13
          synaptic vesicle lumen acidification + 3
Path 2
Term Annotations click to browse term
  biological_process 19834
    cellular process 18637
      cellular component organization or biogenesis 6736
        cellular component organization 6486
          organelle organization 3987
            vesicle organization 308
              synaptic vesicle maturation 13
                synaptic vesicle lumen acidification + 3
paths to the root