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ONTOLOGY REPORT - ANNOTATIONS


Term:carotene metabolic process
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Accession:GO:0016119 term browser browse the term
Definition:The chemical reactions and pathways involving carotenes, hydrocarbon carotenoids.
Synonyms:exact_synonym: carotene metabolism



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carotene metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco2 beta-carotene oxygenase 2 involved_in ISO (PMID:11278918)
(MGI:2159483|PMID:11278918)
RGD PMID:11278918 MGI:2159483 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467
JBrowse link
beta-carotene metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 acts_upstream_of_or_within ISO MGI:3767552 (MGI:5638293|PMID:25701869) RGD PMID:25701869 MGI:5638293 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101
JBrowse link
carotene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 involved_in ISO
IBA
ISS
(PMID:11401432), (PMID:17951468), (PMID:24668807)
PMID:21873635
GO_REF:0000024
(MGI:1931377|PMID:11092891), (MGI:3587559|PMID:15951442)
RGD
UniProt
PMID:11092891 PMID:11401432 PMID:15951442 PMID:17951468 PMID:24668807 More... GO_REF:0000024 MGI:1931377 MGI:3587559, RGD:13792537 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101
JBrowse link
G Bco2 beta-carotene oxygenase 2 involved_in ISO
IBA
(PMID:21302131)
PMID:21873635
(MGI:2159483|PMID:11278918), (MGI:4947204|PMID:21106934)
RGD PMID:11278918 PMID:21106934 PMID:21302131 PMID:21873635 MGI:2159483 MGI:4947204, RGD:13792537 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19876
    metabolic process 12192
      organic substance metabolic process 11723
        hydrocarbon metabolic process 6
          terpene metabolic process 3
            carotene metabolic process 2
              9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene 0
              alpha-zeacarotene metabolic process + 0
              beta-carotene metabolic process + 1
              beta-zeacarotene metabolic process + 0
              carotene biosynthetic process + 0
              carotene catabolic process + 2
              delta-carotene metabolic process + 0
              lycopene metabolic process + 0
              phytoene metabolic process + 0
Path 2
Term Annotations click to browse term
  biological_process 19876
    metabolic process 12192
      primary metabolic process 10955
        lipid metabolic process 1449
          cellular lipid metabolic process 1054
            isoprenoid metabolic process 124
              terpene metabolic process 3
                carotene metabolic process 2
                  9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene 0
                  alpha-zeacarotene metabolic process + 0
                  beta-carotene metabolic process + 1
                  beta-zeacarotene metabolic process + 0
                  carotene biosynthetic process + 0
                  carotene catabolic process + 2
                  delta-carotene metabolic process + 0
                  lycopene metabolic process + 0
                  phytoene metabolic process + 0
paths to the root