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ONTOLOGY REPORT - ANNOTATIONS

Term:diterpenoid metabolic process
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Accession:GO:0016101 term browser browse the term
Definition:The chemical reactions and pathways involving diterpenoid compounds, terpenoids with four isoprene units.
Synonyms:exact_synonym: diterpenoid metabolism
 narrow_synonym: diterpene metabolic process;   diterpene metabolism

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diterpenoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crh corticotropin releasing hormone ISO forskolin RGD PMID:21664419 RGD:5490546 NCBI chrNW_004936496:7,759,656...7,761,555
Ensembl chrNW_004936496:7,760,532...7,761,122 		JBrowse link
G Egfr epidermal growth factor receptor ISO taxanes RGD PMID:21448670 RGD:5131453 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528 		JBrowse link
G Pgr progesterone receptor ISO forskolin, phorbol 12-myristate 13-acetate RGD PMID:8344215 RGD:1601291 NCBI chrNW_004936551:6,498,553...6,573,212
Ensembl chrNW_004936551:6,498,553...6,573,222 		JBrowse link
G Slc12a1 solute carrier family 12 member 1 ISO forskolin RGD PMID:19592485 RGD:7242914 NCBI chrNW_004936471:10,564,530...10,648,124
Ensembl chrNW_004936471:10,564,535...10,646,977 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 ISO forskolin RGD PMID:14997014 RGD:4891943 NCBI chrNW_004936634:758,231...798,809 JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:11876656) MGI PMID:11876656 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11876656) Ensembl
MGI		 PMID:11876656 GO_REF:0000107 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335 		JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11876656) Ensembl
MGI		 PMID:11876656 GO_REF:0000107 NCBI chrNW_004936560:2,562,394...2,580,261
Ensembl chrNW_004936560:2,562,748...2,580,201 		JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:10,465,701...10,487,534
Ensembl chrNW_004936469:10,465,701...10,487,534 		JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chrNW_004936471:33,682,730...33,688,332
Ensembl chrNW_004936471:33,682,730...33,688,332 		JBrowse link
9-cis-retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:17167544 RGD:2306320 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prmt3 protein arginine methyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936654:1,336,546...1,464,959
Ensembl chrNW_004936654:1,336,429...1,461,476 		JBrowse link
phytol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh3a2 aldehyde dehydrogenase 3 family member A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936881:127,090...150,269
Ensembl chrNW_004936881:127,023...150,292 		JBrowse link
G Pecr peroxisomal trans-2-enoyl-CoA reductase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936586:1,164,256...1,186,960
Ensembl chrNW_004936586:1,164,224...1,187,141 		JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965278 retinol dehydrogenase 16 ISO RGD PMID:21138835 RGD:6771354 NCBI chrNW_004936646:1,195,200...1,200,778
Ensembl chrNW_004936646:1,194,547...1,200,897 		JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO RGD PMID:21138835 RGD:6771354 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833 		JBrowse link
regulation of vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgat1 diacylglycerol O-acyltransferase 1 ISO RGD PMID:18000880 RGD:10400849 NCBI chrNW_004936470:7,916,438...7,926,089
Ensembl chrNW_004936470:7,916,438...7,926,088 		JBrowse link
G Isx intestine specific homeobox acts_upstream_of_or_within ISO (PMID:18093975) MGI PMID:18093975 NCBI chrNW_004936492:5,245,211...5,265,419
Ensembl chrNW_004936492:5,245,211...5,265,419 		JBrowse link
retinal metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:4,969,456...5,326,682
Ensembl chrNW_004936537:5,202,093...5,323,527 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12610736) Ensembl
MGI		 PMID:12610736 GO_REF:0000107 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:2,930,781...2,967,309
Ensembl chrNW_004936483:2,930,789...2,967,346 		JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:2,562,394...2,580,261
Ensembl chrNW_004936560:2,562,748...2,580,201 		JBrowse link
G Bco1 beta-carotene oxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25701869) Ensembl
TreeGrafter
MGI		 PMID:25701869 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:28,859,222...28,890,407
Ensembl chrNW_004936475:28,859,318...28,889,934 		JBrowse link
G Bco2 beta-carotene oxygenase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25701869) Ensembl
TreeGrafter
MGI		 PMID:25701869 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936612:2,262,115...2,294,287
Ensembl chrNW_004936612:2,262,066...2,294,255 		JBrowse link
G LOC101969633 dehydrogenase/reductase SDR family member 4-like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936722:481,510...493,330
Ensembl chrNW_004936722:481,481...493,405 		JBrowse link
G LOC101970041 short chain dehydrogenase/reductase family 16C member 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936496:2,919,611...2,937,274
Ensembl chrNW_004936496:2,919,522...2,937,274 		JBrowse link
G LOC101970101 cytochrome P450 1B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936663:345,021...355,188
Ensembl chrNW_004936663:348,368...355,191 		JBrowse link
G LOC101970102 cytochrome P450 27C1 involved_in ISO (PMID:27059013) UniProt PMID:27059013 NCBI chrNW_004936469:44,016,925...44,042,569 JBrowse link
G Rbp4 retinol binding protein 4 acts_upstream_of_or_within ISO (PMID:11562477) MGI PMID:11562477 NCBI chrNW_004936601:1,401,215...1,410,195
Ensembl chrNW_004936601:1,402,691...1,410,208 		JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833 		JBrowse link
G Rdh11 retinol dehydrogenase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12807874) MGI
Ensembl		 PMID:12807874 GO_REF:0000107 NCBI chrNW_004936495:11,065,946...11,082,104
Ensembl chrNW_004936495:11,066,660...11,082,044 		JBrowse link
G Rdh13 retinol dehydrogenase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:356,068...368,525
Ensembl chrNW_004936886:355,879...368,608 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:21785167 GO_REF:0000118 RGD:6893661 NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015 		JBrowse link
retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:21138835 RGD:6771354 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:15950969 PMID:21138835 GO_REF:0000107 RGD:6771322 RGD:6771354 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11013254), (PMID:11044606), (PMID:16241904) RGD
MGI
Ensembl		 PMID:11013254 PMID:11044606 PMID:15950969 PMID:16241904 PMID:21138835 GO_REF:0000107 RGD:6771322 RGD:6771354 NCBI chrNW_004936483:2,930,781...2,967,309
Ensembl chrNW_004936483:2,930,789...2,967,346 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 ISO RGD PMID:15950969 RGD:6771322 NCBI chrNW_004936580:5,861,051...5,866,818
Ensembl chrNW_004936580:5,860,562...5,866,856 		JBrowse link
G Dhrs9 dehydrogenase/reductase 9 ISO RGD PMID:15950969 PMID:21138835 RGD:6771322 RGD:6771354 NCBI chrNW_004936469:10,465,701...10,487,534
Ensembl chrNW_004936469:10,465,701...10,487,534 		JBrowse link
G Rbp1 retinol binding protein 1 involved_in ISO
IEA		 RGD
InterPro		 PMID:15950969 GO_REF:0000002 RGD:6771322 NCBI chrNW_004936540:1,600,673...1,626,573
Ensembl chrNW_004936540:1,600,398...1,626,652 		JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833 		JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970215 cytochrome P450 2W1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936754:1,203,004...1,208,131
Ensembl chrNW_004936754:1,203,017...1,208,131 		JBrowse link
G LOC101975674 cytochrome P450 26B1 involved_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:21138835 GO_REF:0000107 GO_REF:0000117 RGD:6771354 NCBI chrNW_004936491:16,010,394...16,028,852
Ensembl chrNW_004936491:16,010,070...16,028,895 		JBrowse link
G LOC101977861 cytochrome P450 26A1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936601:1,810,572...1,815,927
Ensembl chrNW_004936601:1,809,992...1,814,074 		JBrowse link
G LOC101978131 cytochrome P450 26C1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936601:1,818,037...1,828,400
Ensembl chrNW_004936601:1,817,983...1,828,185 		JBrowse link
retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10358022), (PMID:10402668) Ensembl
TreeGrafter
MGI		 PMID:10358022 PMID:10402668 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936520:3,467,003...3,489,754
Ensembl chrNW_004936520:3,467,003...3,490,997 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:10191271)
(PMID:16207763)
(PMID:12808103), (PMID:12851412)		 MGI PMID:10191271 PMID:12808103 PMID:12851412 PMID:16207763 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16368932)
(PMID:8797830)
(PMID:14623241)		 RGD
MGI
Ensembl		 PMID:8797830 PMID:12547725 PMID:14623241 PMID:16368932 GO_REF:0000107 RGD:1576367 NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16207763)
(PMID:17207476)		 Ensembl
MGI		 PMID:16207763 PMID:17207476 GO_REF:0000107 NCBI chrNW_004936483:2,930,781...2,967,309
Ensembl chrNW_004936483:2,930,789...2,967,346 		JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family member A1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936560:2,562,394...2,580,261
Ensembl chrNW_004936560:2,562,748...2,580,201 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9826179) Ensembl
MGI		 PMID:9826179 GO_REF:0000107 NCBI chrNW_004936580:5,861,051...5,866,818
Ensembl chrNW_004936580:5,860,562...5,866,856 		JBrowse link
G LOC101965278 retinol dehydrogenase 16 ISO RGD PMID:7499345 RGD:1299624 NCBI chrNW_004936646:1,195,200...1,200,778
Ensembl chrNW_004936646:1,194,547...1,200,897 		JBrowse link
G LOC101967606 cytochrome P450 2S1-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,642,674...3,652,697
Ensembl chrNW_004936661:3,642,707...3,651,774 		JBrowse link
G LOC101970102 cytochrome P450 27C1 involved_in ISO (PMID:27059013) UniProt PMID:27059013 NCBI chrNW_004936469:44,016,925...44,042,569 JBrowse link
G LOC101975674 cytochrome P450 26B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:16,010,394...16,028,852
Ensembl chrNW_004936491:16,010,070...16,028,895 		JBrowse link
G LOC101976546 alcohol dehydrogenase E chain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936520:3,508,821...3,552,938 JBrowse link
G LOC101976827 alcohol dehydrogenase 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936520:3,651,829...3,677,841 JBrowse link
G LOC101977861 cytochrome P450 26A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15531370) Ensembl
MGI		 PMID:15531370 GO_REF:0000107 NCBI chrNW_004936601:1,810,572...1,815,927
Ensembl chrNW_004936601:1,809,992...1,814,074 		JBrowse link
G Rbp1 retinol binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15193143) Ensembl
MGI		 PMID:15193143 GO_REF:0000107 NCBI chrNW_004936540:1,600,673...1,626,573
Ensembl chrNW_004936540:1,600,398...1,626,652 		JBrowse link
G Scpep1 serine carboxypeptidase 1 ISO RGD PMID:11447226 RGD:70518 NCBI chrNW_004936490:5,903,884...5,939,953
Ensembl chrNW_004936490:5,904,396...5,939,915 		JBrowse link
retinoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in ISO (PMID:16787387), (PMID:9600267) UniProt PMID:9600267 PMID:16787387 NCBI chrNW_004936520:3,467,003...3,489,754
Ensembl chrNW_004936520:3,467,003...3,490,997 		JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B involved_in ISO (PMID:12732097) UniProt PMID:12732097 NCBI chrNW_004936579:1,312,175...1,328,397 JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 involved_in ISO PMID:7832787 UniProt PMID:7832787 RGD:11558002 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
G Bco1 beta-carotene oxygenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:28,859,222...28,890,407
Ensembl chrNW_004936475:28,859,318...28,889,934 		JBrowse link
G Clps colipase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:23,502,923...23,505,664
Ensembl chrNW_004936476:23,502,923...23,505,664 		JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:7,916,438...7,926,089
Ensembl chrNW_004936470:7,916,438...7,926,088 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24005908) Ensembl
TreeGrafter
MGI		 PMID:24005908 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:1,237,177...1,270,299
Ensembl chrNW_004936474:1,235,962...1,269,510 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294 		JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
G LOC101969767 all-trans-retinol dehydrogenase [NAD(+)] ADH4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,763,849...3,777,177
Ensembl chrNW_004936520:3,760,755...3,775,873 		JBrowse link
G LOC101971467 pancreatic triacylglycerol lipase-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:6,486,381...6,498,578
Ensembl chrNW_004936486:6,486,557...6,498,626 		JBrowse link
G LOC101976546 alcohol dehydrogenase E chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,508,821...3,552,938 JBrowse link
G LOC101977100 alcohol dehydrogenase class-3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,795,214...3,810,732
Ensembl chrNW_004936520:3,795,156...3,810,304 		JBrowse link
G Lpl lipoprotein lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:4,084,099...4,108,219
Ensembl chrNW_004936555:4,084,099...4,108,365 		JBrowse link
G Lrat lecithin retinol acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936576:1,491,480...1,498,568
Ensembl chrNW_004936576:1,492,297...1,501,917 		JBrowse link
G Pnpla2 patatin like phospholipase domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:580,773...585,949
Ensembl chrNW_004936888:580,767...587,083 		JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:5,949,161...5,952,367
Ensembl chrNW_004936527:5,947,960...5,952,579 		JBrowse link
G Rbp1 retinol binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:1,600,673...1,626,573
Ensembl chrNW_004936540:1,600,398...1,626,652 		JBrowse link
G Rbp2 retinol binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:1,547,406...1,571,374
Ensembl chrNW_004936540:1,547,386...1,571,430 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (PMID:25732851) MGI PMID:25732851 NCBI chrNW_004936601:1,401,215...1,410,195
Ensembl chrNW_004936601:1,402,691...1,410,208 		JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:11,065,946...11,082,104
Ensembl chrNW_004936495:11,066,660...11,082,044 		JBrowse link
G Rdh5 retinol dehydrogenase 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936646:191,136...195,279
Ensembl chrNW_004936646:191,128...199,777 		JBrowse link
G Retsat retinol saturase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,826,813...1,837,048
Ensembl chrNW_004936712:1,826,923...1,841,141 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015 		JBrowse link
G Ttr transthyretin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936682:1,628,489...1,635,495
Ensembl chrNW_004936682:1,628,341...1,635,566 		JBrowse link
retinol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:10358022), (PMID:10402668) RGD
TreeGrafter
MGI
Ensembl		 PMID:10358022 PMID:10402668 PMID:10829036 GO_REF:0000107 GO_REF:0000118 RGD:631904 NCBI chrNW_004936520:3,467,003...3,489,754
Ensembl chrNW_004936520:3,467,003...3,490,997 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:12851412) MGI PMID:12851412 NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532 		JBrowse link
G Awat2 acyl-CoA wax alcohol acyltransferase 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936777:1,562,900...1,574,018
Ensembl chrNW_004936777:1,563,229...1,573,993 		JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936470:7,916,438...7,926,089
Ensembl chrNW_004936470:7,916,438...7,926,088 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936498:4,514,212...4,544,523
Ensembl chrNW_004936498:4,514,184...4,544,527 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936474:1,237,177...1,270,299
Ensembl chrNW_004936474:1,235,962...1,269,510 		JBrowse link
G Lipe lipase E, hormone sensitive type involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936706:122,939...139,506
Ensembl chrNW_004936706:128,133...141,276 		JBrowse link
G LOC101961588 cytochrome P450 2D17 involved_in ISO (PMID:10681376) UniProt PMID:10681376 NCBI chrNW_004936718:153,340...157,966 JBrowse link
G LOC101965278 retinol dehydrogenase 16 ISO RGD PMID:7499345 RGD:1299624 NCBI chrNW_004936646:1,195,200...1,200,778
Ensembl chrNW_004936646:1,194,547...1,200,897 		JBrowse link
G LOC101966596 dehydrogenase/reductase SDR family member 7 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936495:4,341,261...4,358,279
Ensembl chrNW_004936495:4,339,700...4,358,547 		JBrowse link
G LOC101969148 cytochrome P450 1A1 involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936471:33,682,730...33,688,332
Ensembl chrNW_004936471:33,682,730...33,688,332 		JBrowse link
G LOC101969421 cytochrome P450 1A2 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936471:33,704,616...33,709,455
Ensembl chrNW_004936471:33,703,792...33,709,484 		JBrowse link
G LOC101969767 all-trans-retinol dehydrogenase [NAD(+)] ADH4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936520:3,763,849...3,777,177
Ensembl chrNW_004936520:3,760,755...3,775,873 		JBrowse link
G LOC101970041 short chain dehydrogenase/reductase family 16C member 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936496:2,919,611...2,937,274
Ensembl chrNW_004936496:2,919,522...2,937,274 		JBrowse link
G LOC101970101 cytochrome P450 1B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936663:345,021...355,188
Ensembl chrNW_004936663:348,368...355,191 		JBrowse link
G LOC101970102 cytochrome P450 27C1 involved_in ISO (PMID:27059013), (PMID:28701464) UniProt PMID:27059013 PMID:28701464 NCBI chrNW_004936469:44,016,925...44,042,569 JBrowse link
G LOC101971467 pancreatic triacylglycerol lipase-like involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936486:6,486,381...6,498,578
Ensembl chrNW_004936486:6,486,557...6,498,626 		JBrowse link
G LOC101976546 alcohol dehydrogenase E chain involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936520:3,508,821...3,552,938 JBrowse link
G LOC101976827 alcohol dehydrogenase 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936520:3,651,829...3,677,841 JBrowse link
G Lrat lecithin retinol acyltransferase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:18093970) RGD
TreeGrafter
MGI
InterPro
Ensembl		 PMID:2253789 PMID:8460936 PMID:9244401 PMID:14642897 PMID:18093970 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1599829 RGD:1599831 RGD:1599832 RGD:6484737 NCBI chrNW_004936576:1,491,480...1,498,568
Ensembl chrNW_004936576:1,492,297...1,501,917 		JBrowse link
G Plb1 phospholipase B1 involved_in ISO
IEA		 RGD
GOC		 PMID:8117729 GO_REF:0000108 RGD:6903951 NCBI chrNW_004936493:4,112,632...4,210,882
Ensembl chrNW_004936493:4,112,858...4,232,492 		JBrowse link
G Pnpla2 patatin like phospholipase domain containing 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936888:580,773...585,949
Ensembl chrNW_004936888:580,767...587,083 		JBrowse link
G Pnpla4 patatin like phospholipase domain containing 4 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936644:1,091,794...1,113,621
Ensembl chrNW_004936644:1,093,388...1,112,557 		JBrowse link
G Rbp1 retinol binding protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15193143)
(PMID:15193143), (PMID:15765518)		 RGD
MGI
Ensembl		 PMID:14642897 PMID:15193143 PMID:15765518 GO_REF:0000107 RGD:6484737 NCBI chrNW_004936540:1,600,673...1,626,573
Ensembl chrNW_004936540:1,600,398...1,626,652 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18093970) Ensembl
MGI		 PMID:18093970 GO_REF:0000107 NCBI chrNW_004936601:1,401,215...1,410,195
Ensembl chrNW_004936601:1,402,691...1,410,208 		JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936648:2,060,131...2,088,021
Ensembl chrNW_004936648:2,060,125...2,088,833 		JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:11,065,946...11,082,104
Ensembl chrNW_004936495:11,066,660...11,082,044 		JBrowse link
G Rdh12 retinol dehydrogenase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:11,111,247...11,121,976
Ensembl chrNW_004936495:11,111,105...11,121,341 		JBrowse link
G Rdh13 retinol dehydrogenase 13 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936886:356,068...368,525
Ensembl chrNW_004936886:355,879...368,608 		JBrowse link
G Rdh14 retinol dehydrogenase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25533474) Ensembl
MGI		 PMID:25533474 GO_REF:0000107 Ensembl chrNW_004936493:12,542,144...12,546,977 JBrowse link
G Rdh8 retinol dehydrogenase 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15755727) MGI
TreeGrafter		 PMID:15755727 GO_REF:0000118 NCBI chrNW_004936659:439,541...445,645 JBrowse link
G Retsat retinol saturase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936712:1,826,813...1,837,048
Ensembl chrNW_004936712:1,826,923...1,841,141 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO
IEA		 RGD
GOC		 PMID:3603006 GO_REF:0000108 RGD:9585656 NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015 		JBrowse link
vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
G Lrat lecithin retinol acyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11108736) Ensembl
TreeGrafter
MGI		 PMID:11108736 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936576:1,491,480...1,498,568
Ensembl chrNW_004936576:1,492,297...1,501,917 		JBrowse link
G Rbp1 retinol binding protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936540:1,600,673...1,626,573
Ensembl chrNW_004936540:1,600,398...1,626,652 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  biological_process 17413
    cellular process 17016
      metabolic process 11317
        primary metabolic process 10066
          lipid metabolic process 1260
            isoprenoid metabolic process 96
              terpenoid metabolic process 75
                diterpenoid metabolic process 67
                  5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process + 0
                  cis-abienol metabolic process + 0
                  copal-8-ol diphosphate(3-) metabolic process + 0
                  diterpene phytoalexin metabolic process + 0
                  diterpenoid biosynthetic process + 11
                  diterpenoid catabolic process + 4
                  gibberellin metabolic process + 0
                  phytol metabolic process + 2
                  retinoid metabolic process + 60
paths to the root