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ONTOLOGY REPORT - ANNOTATIONS

Term:diterpenoid metabolic process
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Accession:GO:0016101 term browser browse the term
Definition:The chemical reactions and pathways involving diterpenoid compounds, terpenoids with four isoprene units.
Synonyms:exact_synonym: diterpenoid metabolism
 narrow_synonym: diterpene metabolic process;   diterpene metabolism

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diterpenoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CRH corticotropin releasing hormone ISO forskolin RGD PMID:21664419 RGD:5490546 NCBI chr 8:62,052,155...62,056,424
Ensembl chr 8:62,052,592...62,053,182 		JBrowse link
G EGFR epidermal growth factor receptor ISO taxanes RGD PMID:21448670 RGD:5131453 NCBI chr21:3,664,622...3,853,492
Ensembl chr21:3,666,339...3,853,239 		JBrowse link
G PGR progesterone receptor ISO forskolin, phorbol 12-myristate 13-acetate RGD PMID:8344215 RGD:1601291 NCBI chr 1:92,420,970...92,519,128
Ensembl chr 1:92,430,453...92,517,296 		JBrowse link
G SLC12A1 solute carrier family 12 member 1 ISO forskolin RGD PMID:19592485 RGD:7242914 NCBI chr26:34,974,947...35,077,241
Ensembl chr26:34,976,126...35,075,186 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO forskolin RGD PMID:14997014 RGD:4891943 NCBI chr 4:6,312,770...6,348,449
Ensembl chr 4:6,312,757...6,350,550 		JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:11876656) MGI PMID:11876656 NCBI chr12:83,949,529...84,092,452
Ensembl chr12:83,949,399...84,009,003 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:11876656) MGI
Ensembl		 PMID:11876656 GO_REF:0000107 NCBI chr26:25,439,159...25,557,199
Ensembl chr26:25,439,360...25,557,202 		JBrowse link
G ALDH8A1 aldehyde dehydrogenase 8 family member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11876656) Ensembl
MGI		 PMID:11876656 GO_REF:0000107 NCBI chr13:38,489,459...38,521,983
Ensembl chr13:38,490,181...38,522,087 		JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr26:8,753,236...8,759,378
Ensembl chr26:8,753,327...8,759,384 		JBrowse link
G DHRS9 dehydrogenase/reductase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:54,611,792...54,641,037
Ensembl chr10:54,614,559...54,641,877 		JBrowse link
9-cis-retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:17167544 RGD:2306320 NCBI chr12:83,949,529...84,092,452
Ensembl chr12:83,949,399...84,009,003 		JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1C3 aldo-keto reductase family 1 member C3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 9:5,248,610...5,263,474 JBrowse link
G PRMT3 protein arginine methyltransferase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:44,486,165...44,621,002
Ensembl chr 1:44,485,880...44,620,936 		JBrowse link
phytol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH3A2 aldehyde dehydrogenase 3 family member A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,213,284...18,241,261
Ensembl chr16:18,213,487...18,239,271 		JBrowse link
G PECR peroxisomal trans-2-enoyl-CoA reductase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr10:101,884,553...101,925,367
Ensembl chr10:101,884,436...101,925,346 		JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RDH10 retinol dehydrogenase 10 ISO RGD PMID:21138835 RGD:6771354 NCBI chr 8:68,903,665...68,933,536
Ensembl chr 8:68,904,352...68,933,792 		JBrowse link
G RDH16 retinol dehydrogenase 16 ISO RGD PMID:21138835 RGD:6771354 NCBI chr11:52,826,447...52,854,731
Ensembl chr11:52,848,488...52,854,167 		JBrowse link
regulation of vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DGAT1 diacylglycerol O-acyltransferase 1 ISO RGD PMID:18000880 RGD:10400849 NCBI chr 8:138,531,113...138,541,721
Ensembl chr 8:138,531,384...138,541,637 		JBrowse link
G ISX intestine specific homeobox acts_upstream_of_or_within ISO (PMID:18093975) MGI PMID:18093975 NCBI chr19:17,827,274...17,850,296
Ensembl chr19:17,828,177...17,852,069 		JBrowse link
retinal metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA4 ATP binding cassette subfamily A member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,140,288...39,271,169
Ensembl chr20:39,140,922...39,267,638 		JBrowse link
G AKR1C3 aldo-keto reductase family 1 member C3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 9:5,248,610...5,263,474 JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12610736) MGI
Ensembl		 PMID:12610736 GO_REF:0000107 NCBI chr26:25,439,159...25,557,199
Ensembl chr26:25,439,360...25,557,202 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in ISO (PMID:11585737) UniProt PMID:11585737 NCBI chr29:19,347,101...19,383,600 JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr29:19,352,008...19,383,622 JBrowse link
G ALDH8A1 aldehyde dehydrogenase 8 family member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:38,489,459...38,521,983
Ensembl chr13:38,490,181...38,522,087 		JBrowse link
G BCO1 beta-carotene oxygenase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25701869) MGI
Ensembl
TreeGrafter		 PMID:25701869 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:66,681,756...66,730,832
Ensembl chr 5:66,681,513...66,733,604 		JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:69,318,713...69,327,277
Ensembl chr14:69,319,495...69,324,157 		JBrowse link
G CYP27C1 cytochrome P450 family 27 subfamily C member 1 involved_in ISO (PMID:27059013) UniProt PMID:27059013 NCBI chr10:2,998,621...3,035,268 JBrowse link
G DHRS4 dehydrogenase/reductase 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12680773) MGI
TreeGrafter		 PMID:12680773 GO_REF:0000118 NCBI chr29:24,170,090...24,185,509
Ensembl chr29:24,169,818...24,185,634 		JBrowse link
G LOC103236829 short chain dehydrogenase/reductase family 16C member 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:52,330,362...52,365,253
Ensembl chr 8:52,330,731...52,351,250 		JBrowse link
G LOC103248467 beta,beta-carotene 9',10'-oxygenase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25701869) Ensembl
TreeGrafter
MGI		 PMID:25701869 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:103,511,730...103,566,526
Ensembl chr 1:103,521,658...103,565,659 		JBrowse link
G RBP4 retinol binding protein 4 acts_upstream_of_or_within ISO (PMID:11562477) MGI PMID:11562477 NCBI chr 9:86,831,042...86,840,668
Ensembl chr 9:86,830,957...86,840,250 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:68,903,665...68,933,536
Ensembl chr 8:68,904,352...68,933,792 		JBrowse link
G RDH11 retinol dehydrogenase 11 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12807874) MGI
Ensembl		 PMID:12807874 GO_REF:0000107 NCBI chr24:44,911,830...44,932,632
Ensembl chr24:44,909,001...44,932,611 		JBrowse link
G RDH13 retinol dehydrogenase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:47,634,909...47,652,829
Ensembl chr 6:47,636,094...47,652,772 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:21785167 GO_REF:0000118 RGD:6893661 NCBI chr20:64,662,777...64,684,178
Ensembl chr20:64,664,358...64,683,211 		JBrowse link
retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:21138835 RGD:6771354 NCBI chr12:83,949,529...84,092,452
Ensembl chr12:83,949,399...84,009,003 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in ISO
IEA		 RGD
Ensembl		 PMID:15950969 PMID:21138835 GO_REF:0000107 RGD:6771322 RGD:6771354 NCBI chr26:25,439,159...25,557,199
Ensembl chr26:25,439,360...25,557,202 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 ISO (PMID:27759097)
(PMID:14623956)
(PMID:11013254), (PMID:11044606), (PMID:16241904)		 UniProt
MGI
RGD		 PMID:11013254 PMID:11044606 PMID:14623956 PMID:15950969 PMID:16241904 More... RGD:6771322 RGD:6771354 NCBI chr29:19,347,101...19,383,600 JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr29:19,352,008...19,383,622 JBrowse link
G CRABP2 cellular retinoic acid binding protein 2 ISO RGD PMID:15950969 RGD:6771322 NCBI chr20:7,159,022...7,164,586
Ensembl chr20:7,159,238...7,164,163 		JBrowse link
G DHRS9 dehydrogenase/reductase 9 ISO RGD PMID:15950969 PMID:21138835 RGD:6771322 RGD:6771354 NCBI chr10:54,611,792...54,641,037
Ensembl chr10:54,614,559...54,641,877 		JBrowse link
G RBP1 retinol binding protein 1 ISO RGD PMID:15950969 RGD:6771322 NCBI chr15:51,011,664...51,033,963 JBrowse link
G RBP1 retinol binding protein 1 involved_in IEA InterPro GO_REF:0000002 Ensembl chr15:51,011,771...51,034,413 JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17473173) Ensembl
MGI		 PMID:17473173 GO_REF:0000107 NCBI chr 8:68,903,665...68,933,536
Ensembl chr 8:68,904,352...68,933,792 		JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in ISO
IEA		 RGD
UniProt
Ensembl		 PMID:21138835 GO_REF:0000107 GO_REF:0000117 RGD:6771354 NCBI chr14:35,030,011...35,057,164
Ensembl chr14:35,038,654...35,057,176 		JBrowse link
G CYP2W1 cytochrome P450 family 2 subfamily W member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:20,580,272...20,592,771
Ensembl chr28:20,582,287...20,591,497 		JBrowse link
G LOC103216270 cytochrome P450 26A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:86,310,142...86,328,622
Ensembl chr 9:86,325,401...86,328,775 		JBrowse link
G LOC119618102 cytochrome P450 26C1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 Ensembl chr 9:86,311,950...86,319,834 JBrowse link
retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH6 alcohol dehydrogenase 6 (class V) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:47,294,074...47,309,771
Ensembl chr 7:47,291,221...47,309,102 		JBrowse link
G ADH7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10358022), (PMID:10402668) MGI
Ensembl
TreeGrafter		 PMID:10358022 PMID:10402668 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:47,571,477...47,592,502
Ensembl chr 7:47,571,564...47,590,593 		JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:16207763)
(PMID:12808103), (PMID:12851412)
(PMID:10191271)		 MGI PMID:10191271 PMID:12808103 PMID:12851412 PMID:16207763 NCBI chr12:83,949,529...84,092,452
Ensembl chr12:83,949,399...84,009,003 		JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:8797830)
(PMID:14623241)
(PMID:16368932)		 RGD
Ensembl
MGI		 PMID:8797830 PMID:12547725 PMID:14623241 PMID:16368932 GO_REF:0000107 RGD:1576367 NCBI chr26:25,439,159...25,557,199
Ensembl chr26:25,439,360...25,557,202 		JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in
acts_upstream_of_or_within		 ISO (PMID:11585737)
(PMID:16207763)
(PMID:17207476)		 UniProt
MGI		 PMID:11585737 PMID:16207763 PMID:17207476 NCBI chr29:19,347,101...19,383,600 JBrowse link
G ALDH1A3 aldehyde dehydrogenase 1 family member A3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr29:19,352,008...19,383,622 JBrowse link
G ALDH8A1 aldehyde dehydrogenase 8 family member A1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:38,489,459...38,521,983
Ensembl chr13:38,490,181...38,522,087 		JBrowse link
G CRABP2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9826179) MGI
Ensembl		 PMID:9826179 GO_REF:0000107 NCBI chr20:7,159,022...7,164,586
Ensembl chr20:7,159,238...7,164,163 		JBrowse link
G CYP26B1 cytochrome P450 family 26 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:35,030,011...35,057,164
Ensembl chr14:35,038,654...35,057,176 		JBrowse link
G CYP27C1 cytochrome P450 family 27 subfamily C member 1 involved_in ISO (PMID:27059013) UniProt PMID:27059013 NCBI chr10:2,998,621...3,035,268 JBrowse link
G CYP2C18 cytochrome P450 family 2 subfamily C member 18 involved_in ISO (PMID:11093772) UniProt PMID:11093772 NCBI chr 9:87,881,444...87,941,586 JBrowse link
G CYP2C8 cytochrome P450 family 2 subfamily C member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:88,154,131...88,183,915
Ensembl chr 9:88,154,134...88,183,458 		JBrowse link
G CYP2S1 cytochrome P450 family 2 subfamily S member 1 involved_in ISO (PMID:12711469) UniProt PMID:12711469 NCBI chr 6:35,512,559...35,521,775 JBrowse link
G CYP2S1 cytochrome P450 family 2 subfamily S member 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 6:35,513,232...35,520,745 JBrowse link
G CYP3A4 cytochrome P450 family 3 subfamily A member 4 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr28:13,313,930...13,331,832 JBrowse link
G CYP3A5 cytochrome P450 family 3 subfamily A member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:13,473,649...13,517,905
Ensembl chr28:13,491,483...13,519,507 		JBrowse link
G LOC103216270 cytochrome P450 26A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15531370) Ensembl
MGI		 PMID:15531370 GO_REF:0000107 NCBI chr 9:86,310,142...86,328,622
Ensembl chr 9:86,325,401...86,328,775 		JBrowse link
G LOC103236010 alcohol dehydrogenase 1C involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:47,480,809...47,526,508 JBrowse link
G LOC103246766 cytochrome P450 3A8 involved_in ISO (PMID:11093772) UniProt PMID:11093772 NCBI chr28:13,297,566...13,330,023 JBrowse link
G RBP1 retinol binding protein 1 acts_upstream_of_or_within ISO (PMID:15193143) MGI PMID:15193143 NCBI chr15:51,011,664...51,033,963 JBrowse link
G RBP1 retinol binding protein 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:51,011,771...51,034,413 JBrowse link
G RDH16 retinol dehydrogenase 16 ISO RGD PMID:7499345 RGD:1299624 NCBI chr11:52,826,447...52,854,731
Ensembl chr11:52,848,488...52,854,167 		JBrowse link
G SCPEP1 serine carboxypeptidase 1 ISO RGD PMID:11447226 RGD:70518 NCBI chr16:36,398,059...36,427,429
Ensembl chr16:36,398,615...36,427,404 		JBrowse link
retinoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:47,226,787...47,248,518
Ensembl chr 7:47,226,191...47,248,234 		JBrowse link
G ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12027900) MGI
Ensembl		 PMID:12027900 GO_REF:0000107 NCBI chr 7:47,190,031...47,211,670
Ensembl chr 7:47,190,294...47,211,651 		JBrowse link
G ADH7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in ISO (PMID:16787387), (PMID:9600267) UniProt PMID:9600267 PMID:16787387 NCBI chr 7:47,571,477...47,592,502
Ensembl chr 7:47,571,564...47,590,593 		JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 involved_in ISO PMID:7832787 UniProt PMID:7832787 RGD:11558002 NCBI chr12:83,949,529...84,092,452
Ensembl chr12:83,949,399...84,009,003 		JBrowse link
G BCO1 beta-carotene oxygenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:66,681,756...66,730,832
Ensembl chr 5:66,681,513...66,733,604 		JBrowse link
G CLPS colipase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:36,320,468...36,322,912
Ensembl chr17:36,320,541...36,322,902 		JBrowse link
G CYP2J2 cytochrome P450 family 2 subfamily J member 2 ISO RGD PMID:9606960 RGD:1625388 NCBI chr20:73,083,312...73,115,174
Ensembl chr20:73,083,389...73,115,077 		JBrowse link
G DGAT1 diacylglycerol O-acyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:138,531,113...138,541,721
Ensembl chr 8:138,531,384...138,541,637 		JBrowse link
G DHRS3 dehydrogenase/reductase 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24005908) MGI
Ensembl
TreeGrafter		 PMID:24005908 GO_REF:0000107 GO_REF:0000118 NCBI chr20:119,183,453...119,236,953
Ensembl chr20:119,184,996...119,237,015 		JBrowse link
G DHRS4 dehydrogenase/reductase 4 involved_in ISO (PMID:12604222) UniProt PMID:12604222 NCBI chr29:24,170,090...24,185,509
Ensembl chr29:24,169,818...24,185,634 		JBrowse link
G LDLR low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:10,062,204...10,091,780
Ensembl chr 6:10,062,790...10,091,377 		JBrowse link
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27354281) Ensembl
MGI		 PMID:27354281 GO_REF:0000107 NCBI chr 9:82,639,220...82,677,479
Ensembl chr 9:82,638,621...82,677,488 		JBrowse link
G LOC103226928 aldo-keto reductase family 1 member B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:103,060,018...103,076,844
Ensembl chr21:103,059,991...103,077,341 		JBrowse link
G LOC103236010 alcohol dehydrogenase 1C involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:47,480,809...47,526,508 JBrowse link
G LOC119620184 alcohol dehydrogenase class-3-like involved_in IEA Ensembl GO_REF:0000107
G LPL lipoprotein lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:18,009,049...18,038,315
Ensembl chr 8:18,009,093...18,038,598 		JBrowse link
G LRAT lecithin retinol acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:101,297,114...101,304,675
Ensembl chr 7:101,297,691...101,302,520 		JBrowse link
G PNLIP pancreatic lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:109,330,050...109,375,687
Ensembl chr 9:109,352,806...109,375,670 		JBrowse link
G PNPLA2 patatin like phospholipase domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:626,060...631,556 JBrowse link
G RARRES2 retinoic acid receptor responder 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:118,487,199...118,490,561
Ensembl chr21:118,487,506...118,489,516 		JBrowse link
G RBP1 retinol binding protein 1 involved_in ISO (PMID:10487743) MGI PMID:10487743 NCBI chr15:51,011,664...51,033,963 JBrowse link
G RBP1 retinol binding protein 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:51,011,771...51,034,413 JBrowse link
G RBP2 retinol binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:51,077,753...51,102,110
Ensembl chr15:51,078,169...51,102,249 		JBrowse link
G RBP4 retinol binding protein 4 involved_in ISO (PMID:25732851) MGI PMID:25732851 NCBI chr 9:86,831,042...86,840,668
Ensembl chr 9:86,830,957...86,840,250 		JBrowse link
G RDH11 retinol dehydrogenase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:44,911,830...44,932,632
Ensembl chr24:44,909,001...44,932,611 		JBrowse link
G RDH5 retinol dehydrogenase 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr11:51,667,461...51,672,386
Ensembl chr11:51,668,803...51,672,192 		JBrowse link
G RETSAT retinol saturase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:21,803,919...21,816,637
Ensembl chr14:21,803,417...21,815,473 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:64,662,777...64,684,178
Ensembl chr20:64,664,358...64,683,211 		JBrowse link
G TTR transthyretin involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:49,124,302...49,131,495
Ensembl chr18:49,124,121...49,131,399 		JBrowse link
retinol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:47,226,787...47,248,518
Ensembl chr 7:47,226,191...47,248,234 		JBrowse link
G ADH6 alcohol dehydrogenase 6 (class V) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 7:47,294,074...47,309,771
Ensembl chr 7:47,291,221...47,309,102 		JBrowse link
G ADH7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:10358022), (PMID:10402668) RGD
Ensembl
TreeGrafter
MGI		 PMID:10358022 PMID:10402668 PMID:10829036 GO_REF:0000107 GO_REF:0000118 RGD:631904 NCBI chr 7:47,571,477...47,592,502
Ensembl chr 7:47,571,564...47,590,593 		JBrowse link
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (PMID:12851412) MGI PMID:12851412 NCBI chr12:83,949,529...84,092,452
Ensembl chr12:83,949,399...84,009,003 		JBrowse link
G AWAT2 acyl-CoA wax alcohol acyltransferase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr  X:59,863,353...59,872,621
Ensembl chr  X:59,863,866...59,871,925 		JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 involved_in IEA UniProt
Ensembl		 GO_REF:0000041 GO_REF:0000107 NCBI chr26:8,753,236...8,759,378
Ensembl chr26:8,753,327...8,759,384 		JBrowse link
G CYP1A2 cytochrome P450 family 1 subfamily A member 2 involved_in ISO (PMID:10681376) UniProt PMID:10681376 NCBI chr26:8,727,996...8,733,254 JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:69,318,713...69,327,277
Ensembl chr14:69,319,495...69,324,157 		JBrowse link
G CYP1D1 cytochrome P450 family 1 subfamily D member 1 involved_in IEA UniProt GO_REF:0000041 Ensembl chr12:84,092,071...84,105,822 JBrowse link
G CYP27C1 cytochrome P450 family 27 subfamily C member 1 involved_in ISO (PMID:27059013), (PMID:28701464) UniProt PMID:27059013 PMID:28701464 NCBI chr10:2,998,621...3,035,268 JBrowse link
G CYP2D6 cytochrome P450 family 2 subfamily D member 6 involved_in ISO (PMID:10681376) UniProt PMID:10681376 NCBI chr19:24,667,207...24,672,580
Ensembl chr19:24,667,282...24,671,513 		JBrowse link
G CYP3A4 cytochrome P450 family 3 subfamily A member 4 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr28:13,313,930...13,331,832 JBrowse link
G DGAT1 diacylglycerol O-acyltransferase 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 8:138,531,113...138,541,721
Ensembl chr 8:138,531,384...138,541,637 		JBrowse link
G DGAT2 diacylglycerol O-acyltransferase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:66,985,413...67,018,058
Ensembl chr 1:66,985,466...67,021,182 		JBrowse link
G DHRS3 dehydrogenase/reductase 3 involved_in IEA GOC GO_REF:0000108 NCBI chr20:119,183,453...119,236,953
Ensembl chr20:119,184,996...119,237,015 		JBrowse link
G DHRS7 dehydrogenase/reductase 7 involved_in IEA GOC GO_REF:0000108 NCBI chr24:37,368,792...37,389,433
Ensembl chr24:37,368,982...37,389,403 		JBrowse link
G LIPE lipase E, hormone sensitive type involved_in IEA GOC GO_REF:0000108 NCBI chr 6:36,604,822...36,630,648
Ensembl chr 6:36,605,126...36,630,376 		JBrowse link
G LOC103236010 alcohol dehydrogenase 1C involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:47,480,809...47,526,508 JBrowse link
G LOC103236829 short chain dehydrogenase/reductase family 16C member 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 8:52,330,362...52,365,253
Ensembl chr 8:52,330,731...52,351,250 		JBrowse link
G LOC103246766 cytochrome P450 3A8 involved_in ISO (PMID:10681376) UniProt PMID:10681376 NCBI chr28:13,297,566...13,330,023 JBrowse link
G LRAT lecithin retinol acyltransferase involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:18093970) RGD
TreeGrafter
MGI
InterPro
Ensembl		 PMID:2253789 PMID:8460936 PMID:9244401 PMID:14642897 PMID:18093970 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1599829 RGD:1599831 RGD:1599832 RGD:6484737 NCBI chr 7:101,297,114...101,304,675
Ensembl chr 7:101,297,691...101,302,520 		JBrowse link
G PLB1 phospholipase B1 involved_in ISO
IEA		 RGD
GOC		 PMID:8117729 GO_REF:0000108 RGD:6903951 NCBI chr14:78,960,601...79,122,082
Ensembl chr14:78,960,202...79,096,555 		JBrowse link
G PNLIP pancreatic lipase involved_in IEA GOC GO_REF:0000108 NCBI chr 9:109,330,050...109,375,687
Ensembl chr 9:109,352,806...109,375,670 		JBrowse link
G PNPLA2 patatin like phospholipase domain containing 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 1:626,060...631,556 JBrowse link
G PNPLA4 patatin like phospholipase domain containing 4 involved_in IEA GOC GO_REF:0000108 NCBI chr  X:6,247,971...6,396,168
Ensembl chr  X:6,363,541...6,394,704 		JBrowse link
G RBP1 retinol binding protein 1 acts_upstream_of_or_within ISO (PMID:15193143)
(PMID:15193143), (PMID:15765518)		 RGD
MGI		 PMID:14642897 PMID:15193143 PMID:15765518 RGD:6484737 NCBI chr15:51,011,664...51,033,963 JBrowse link
G RBP1 retinol binding protein 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:51,011,771...51,034,413 JBrowse link
G RBP4 retinol binding protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18093970) Ensembl
MGI		 PMID:18093970 GO_REF:0000107 NCBI chr 9:86,831,042...86,840,668
Ensembl chr 9:86,830,957...86,840,250 		JBrowse link
G RDH10 retinol dehydrogenase 10 involved_in IEA Ensembl
UniProt		 GO_REF:0000041 GO_REF:0000107 NCBI chr 8:68,903,665...68,933,536
Ensembl chr 8:68,904,352...68,933,792 		JBrowse link
G RDH11 retinol dehydrogenase 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:44,911,830...44,932,632
Ensembl chr24:44,909,001...44,932,611 		JBrowse link
G RDH12 retinol dehydrogenase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:44,957,854...44,971,855
Ensembl chr24:44,959,921...44,971,836 		JBrowse link
G RDH13 retinol dehydrogenase 13 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:47,634,909...47,652,829
Ensembl chr 6:47,636,094...47,652,772 		JBrowse link
G RDH14 retinol dehydrogenase 14 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25533474) MGI
Ensembl		 PMID:25533474 GO_REF:0000107 NCBI chr14:89,128,850...89,134,879
Ensembl chr14:89,128,828...89,135,033 		JBrowse link
G RDH16 retinol dehydrogenase 16 ISO RGD PMID:7499345 RGD:1299624 NCBI chr11:52,826,447...52,854,731
Ensembl chr11:52,848,488...52,854,167 		JBrowse link
G RDH8 retinol dehydrogenase 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15755727) MGI
TreeGrafter		 PMID:15755727 GO_REF:0000118 NCBI chr 6:9,096,680...9,102,770 JBrowse link
G RETSAT retinol saturase involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chr14:21,803,919...21,816,637
Ensembl chr14:21,803,417...21,815,473 		JBrowse link
G RPE65 retinoid isomerohydrolase RPE65 involved_in ISO
IEA		 RGD
GOC		 PMID:3603006 GO_REF:0000108 RGD:9585656 NCBI chr20:64,662,777...64,684,178
Ensembl chr20:64,664,358...64,683,211 		JBrowse link
vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIPA lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27354281) Ensembl
MGI		 PMID:27354281 GO_REF:0000107 NCBI chr 9:82,639,220...82,677,479
Ensembl chr 9:82,638,621...82,677,488 		JBrowse link
G LRAT lecithin retinol acyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11108736) Ensembl
TreeGrafter
MGI		 PMID:11108736 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:101,297,114...101,304,675
Ensembl chr 7:101,297,691...101,302,520 		JBrowse link
G RBP1 retinol binding protein 1 involved_in ISO (PMID:15632377) UniProt PMID:15632377 NCBI chr15:51,011,664...51,033,963 JBrowse link
G RBP1 retinol binding protein 1 involved_in IEA InterPro GO_REF:0000002 Ensembl chr15:51,011,771...51,034,413 JBrowse link
Term paths to the root
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Term Annotations click to browse term
  biological_process 19806
    cellular process 19328
      metabolic process 13124
        primary metabolic process 11563
          lipid metabolic process 1324
            isoprenoid metabolic process 114
              terpenoid metabolic process 91
                diterpenoid metabolic process 79
                  5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate metabolic process + 0
                  cis-abienol metabolic process + 0
                  copal-8-ol diphosphate(3-) metabolic process + 0
                  diterpene phytoalexin metabolic process + 0
                  diterpenoid biosynthetic process + 14
                  diterpenoid catabolic process + 4
                  gibberellin metabolic process + 0
                  phytol metabolic process + 2
                  retinoid metabolic process + 72
paths to the root