ONTOLOGY REPORT - ANNOTATIONS
Term: synaptic vesicle priming
Accession: GO:0016082
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Definition: A process that converts synaptic vesicles to a state of competence for calcium triggered fusion with the active zone membrane by bringing the two membranes into very close proximity. Priming typically (but not always) occurs after docking (Jahn and Fasshauer, 2012). Primed vesicles are also capable of spontaneously fusing with the active zone membrane.
Comment: Although this process can occur outside of synaptic transmission, by convention we treat it as a part of synaptic transmission. (dos, pvn, fk synapse project 2015)
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AABR07053516.1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
Ensembl chr 3:112,346,627...112,361,216
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Cadps
calcium dependent secretion activator
acts_upstream_of_or_within involved_in
IEA ISO
GO_REF:0000107 MGI:2443963 (MGI:4879076|PMID:21040848) UniProtKB:Q8BYR5 (MGI:3773298|PMID:18022372), (MGI:5617001|PMID:25374362) MGI:2443963|UniProtKB:Q8BYR5 (MGI:3773298|PMID:18022372), (MGI:4879076|PMID:21040848), (MGI:5617001|PMID:25374362)
Ensembl RGD
PMID:18022372 PMID:21040848 PMID:25374362
GO_REF:0000107 MGI:3773298 MGI:4879076 MGI:5617001
NCBI chr15:15,275,489...15,690,575
Ensembl chr15:15,275,541...15,667,778
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Cadps2
calcium dependent secretion activator 2
involved_in acts_upstream_of_or_within
ISO
MGI:1350922|UniProtKB:Q80TJ1 (MGI:4879076|PMID:21040848), (MGI:5617001|PMID:25374362), (MGI:6189303|PMID:25437547) UniProtKB:Q80TJ1 (MGI:5617001|PMID:25374362), (MGI:6189303|PMID:25437547) MGI:1350922 (MGI:4879076|PMID:21040848)
RGD
PMID:21040848 PMID:25374362 PMID:25437547
MGI:4879076 MGI:5617001 MGI:6189303
NCBI chr 4:50,326,447...50,861,161
Ensembl chr 4:50,326,442...50,860,756
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Erc1
ELKS/RAB6-interacting/CAST family member 1
involved_in
ISO
(MGI:5882646|PMID:27253063)
RGD
PMID:27253063
MGI:5882646
NCBI chr 4:152,087,393...152,380,023
Ensembl chr 4:152,087,379...152,380,184
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Erc2
ELKS/RAB6-interacting/CAST family member 2
involved_in
ISO
(MGI:4415657|PMID:19874790)
RGD
PMID:19874790
MGI:4415657
NCBI chr16:3,258,580...4,283,592
Ensembl chr16:3,293,599...3,679,222
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Napa
NSF attachment protein alpha
involved_in
ISO
(MGI:4879076|PMID:21040848)
RGD
PMID:21040848
MGI:4879076
NCBI chr 1:77,994,227...78,012,846
Ensembl chr 1:77,994,203...78,012,845
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Otof
otoferlin
involved_in
ISO IBA
(MGI:4461353|PMID:20562868) PMID:21873635
RGD
PMID:20562868 , PMID:21873635 , PMID:21873635
MGI:4461353 , RGD:13792537 , RGD:13792537
NCBI chr 6:27,328,343...27,424,864
Ensembl chr 6:27,328,406...27,424,864
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Rims1
regulating synaptic membrane exocytosis 1
involved_in
ISO
(MGI:4887275|PMID:21262469), (MGI:5432438|PMID:22753485)
RGD
PMID:21262469 PMID:22753485
MGI:4887275 MGI:5432438
NCBI chr 9:28,440,408...28,973,246
Ensembl chr 9:28,442,229...28,973,246
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Rims2
regulating synaptic membrane exocytosis 2
involved_in
ISO
(MGI:5432438|PMID:22753485)
RGD
PMID:22753485
MGI:5432438
NCBI chr 7:78,091,998...78,594,164
Ensembl chr 7:78,092,037...78,594,138
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Snap23
synaptosome associated protein 23
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr 3:112,333,972...112,362,960
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Snap25
synaptosome associated protein 25
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr 3:129,697,408...129,788,417
Ensembl chr 3:129,599,353...129,788,400
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Snap29
synaptosome associated protein 29
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr11:87,827,633...87,858,107
Ensembl chr11:87,827,651...87,858,107
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Snap47
synaptosome associated protein 47
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635 , PMID:21873635
RGD:13792537 , RGD:13792537
NCBI chr10:45,757,196...45,798,734
Ensembl chr10:45,757,197...45,798,715
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Snca
synuclein alpha
involved_in
ISO
(PMID:30404828)
RGD
PMID:30404828
NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285
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Stxbp1
syntaxin binding protein 1
involved_in
ISO
(MGI:3695670|PMID:17110441)
RGD
PMID:17110441
MGI:3695670
NCBI chr 3:11,823,779...11,885,479
Ensembl chr 3:11,823,785...11,885,417
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Sv2a
synaptic vesicle glycoprotein 2a
involved_in
ISO
(MGI:3831988|PMID:19176798)
RGD
PMID:19176798
MGI:3831988
NCBI chr 2:198,321,100...198,336,889
Ensembl chr 2:198,321,142...198,336,913
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Synj1
synaptojanin 1
acts_upstream_of_or_within
ISO
MGI:2179801 (MGI:2447947|PMID:12481038)
RGD
PMID:12481038
MGI:2447947
NCBI chr11:31,105,784...31,181,573
Ensembl chr11:31,104,787...31,180,642
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Unc13a
unc-13 homolog A
involved_in
IDA ISO IEA IBA
UniProtKB:Q9Z1N9 (MGI:2158113|PMID:11832228), (MGI:5617001|PMID:25374362) GO_REF:0000002 PMID:21873635
RGD InterPro
PMID:11832228 PMID:25374362 , PMID:21499244 , PMID:21873635 , PMID:21873635
GO_REF:0000002 MGI:2158113 MGI:5617001 , RGD:5686389 , RGD:13792537 , RGD:13792537
NCBI chr16:20,056,398...20,103,951
Ensembl chr16:20,056,765...20,097,287
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Unc13b
unc-13 homolog B
involved_in acts_upstream_of_or_within
IMP ISO IBA ISS
PMID:22966208 UniProtKB:Q4KUS2 (MGI:2158113|PMID:11832228), (MGI:5617001|PMID:25374362) MGI:2449706 (MGI:2181453|PMID:12070347) PMID:21873635 GO_REF:0000024 MGI:2449706|UniProtKB:Q4KUS2 (MGI:2158113|PMID:11832228), (MGI:2181453|PMID:12070347), (MGI:5617001|PMID:25374362)
RGD ParkinsonsUK-UCL
PMID:11832228 PMID:12070347 PMID:25374362 , PMID:22966208 , PMID:21873635 , PMID:22966208 , PMID:21873635
GO_REF:0000024 MGI:2158113 MGI:2181453 MGI:5617001 , RGD:11535109 , RGD:13792537 , RGD:11535109 , RGD:13792537
NCBI chr 5:58,505,449...58,714,396
Ensembl chr 5:58,505,500...58,715,576
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Unc13c
unc-13 homolog C
involved_in
IMP IBA
PMID:22966208 PMID:21873635
ParkinsonsUK-UCL GO_Central
PMID:22966208 , PMID:21873635 , PMID:22966208 , PMID:21873635
RGD:11535109 , RGD:13792537 , RGD:11535109 , RGD:13792537
NCBI chr 8:80,202,736...80,656,363
Ensembl chr 8:80,203,609...80,631,926
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Rims1
regulating synaptic membrane exocytosis 1
involved_in
IGI
PMID:21262469
ParkinsonsUK-UCL
PMID:21262469 , PMID:21262469
RGD:10047275 , RGD:10047275
NCBI chr 9:28,440,408...28,973,246
Ensembl chr 9:28,442,229...28,973,246
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Unc13b
unc-13 homolog B
involved_in
IGI
PMID:21262469
ParkinsonsUK-UCL
PMID:21262469 , PMID:21262469 , PMID:21262469 , PMID:21262469
RGD:10047275 , RGD:10047275 , RGD:10047275 , RGD:10047275
NCBI chr 5:58,505,449...58,714,396
Ensembl chr 5:58,505,500...58,715,576
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Napa
NSF attachment protein alpha
acts_upstream_of_or_within involved_in
ISO IBA
MGI:104562 (MGI:4879076|PMID:21040848) PMID:21873635
RGD
PMID:21040848 , PMID:21873635 , PMID:21873635
MGI:4879076 , RGD:13792537 , RGD:13792537
NCBI chr 1:77,994,227...78,012,846
Ensembl chr 1:77,994,203...78,012,845
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Napb
NSF attachment protein beta
acts_upstream_of_or_within involved_in
IEA ISO IBA
GO_REF:0000107 MGI:104563 (MGI:4879076|PMID:21040848) PMID:21873635
Ensembl RGD
PMID:21040848 , PMID:21873635 , PMID:21873635
GO_REF:0000107 MGI:4879076 , RGD:13792537 , RGD:13792537
NCBI chr 3:143,017,571...143,063,904
Ensembl chr 3:143,020,454...143,063,983
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Rab3a
RAB3A, member RAS oncogene family
involved_in
IDA
PMID:21689256
UniProt
PMID:21689256 , PMID:21689256
RGD:14390056 , RGD:14390056
NCBI chr16:20,435,098...20,439,206
Ensembl chr16:20,435,101...20,439,206
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Stx1a
syntaxin 1A
involved_in
ISO
UniProtKB:O35526|UniProtKB:P61264 (MGI:5521403|PMID:24133272)
RGD
PMID:24133272
MGI:5521403
NCBI chr12:24,682,050...24,710,002
Ensembl chr12:24,682,041...24,710,019
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Stx1b
syntaxin 1B
involved_in
ISS ISO
GO_REF:0000024 UniProtKB:O35526 (MGI:5521403|PMID:24133272)
ParkinsonsUK-UCL RGD
PMID:24133272
GO_REF:0000024 MGI:5521403
NCBI chr 1:199,251,842...199,270,465
Ensembl chr 1:199,251,844...199,270,627
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Stxbp1
syntaxin binding protein 1
involved_in
IMP IDA
PMID:21689256
RGD UniProt
PMID:19255244 , PMID:21689256 , PMID:21689256
RGD:2311128 , RGD:14390056 , RGD:14390056
NCBI chr 3:11,823,779...11,885,479
Ensembl chr 3:11,823,785...11,885,417
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Stxbp5
syntaxin binding protein 5
involved_in
ISO
(MGI:3814264|PMID:18936251)
RGD
PMID:18936251
MGI:3814264
NCBI chr 1:3,858,917...4,011,684
Ensembl chr 1:3,858,909...4,011,511
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Unc13a
unc-13 homolog A
involved_in
IDA
PMID:21689256
UniProt
PMID:21689256 , PMID:21689256
RGD:14390056 , RGD:14390056
NCBI chr16:20,056,398...20,103,951
Ensembl chr16:20,056,765...20,097,287
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