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ONTOLOGY REPORT - ANNOTATIONS


Term:tRNA catabolic process
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Accession:GO:0016078 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of tRNA, transfer RNA, a class of relatively small RNA molecules responsible for mediating the insertion of amino acids into the sequence of nascent polypeptide chains during protein synthesis.
Synonyms:exact_synonym: tRNA breakdown;   tRNA catabolism;   tRNA degradation


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tRNA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pop1 POP1 homolog, ribonuclease P/MRP subunit JBrowse link 7 73,270,403 73,298,209 RGD:1624291
G Slfn13 schlafen family member 13 JBrowse link 10 70,326,157 70,343,024 RGD:13601999
nuclear polyadenylation-dependent tRNA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Exosc10 exosome component 10 JBrowse link 5 165,374,964 165,398,195 RGD:13792537
G Exosc2 exosome component 2 JBrowse link 3 10,151,734 10,161,997 RGD:13792537
G Exosc3 exosome component 3 JBrowse link 5 60,866,498 60,871,734 RGD:13792537
G Exosc7 exosome component 7 JBrowse link 8 132,204,628 132,229,968 RGD:13792537
G Exosc8 exosome component 8 JBrowse link 2 143,925,643 143,932,240 RGD:13792537
G Exosc9 exosome component 9 JBrowse link 2 123,264,679 123,275,623 RGD:13792537
tRNA stabilization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nsun2 NOP2/Sun RNA methyltransferase 2 JBrowse link 1 36,295,650 36,319,906 RGD:1624291
G Trdmt1 tRNA aspartic acid methyltransferase 1 JBrowse link 17 80,824,652 80,859,585 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      primary metabolic process 10750
        nucleobase-containing compound metabolic process 5344
          nucleobase-containing compound catabolic process 365
            RNA catabolic process 261
              ncRNA catabolic process 37
                tRNA catabolic process 10
                  negative regulation of tRNA catabolic process + 2
                  nuclear polyadenylation-dependent tRNA catabolic process 6
                  positive regulation of tRNA catabolic process + 0
                  regulation of tRNA catabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 19858
    metabolic process 12097
      cellular metabolic process 10918
        cellular aromatic compound metabolic process 5567
          nucleobase-containing compound metabolic process 5344
            nucleic acid metabolic process 4850
              RNA metabolic process 4347
                ncRNA metabolic process 515
                  tRNA metabolic process 174
                    tRNA catabolic process 10
                      negative regulation of tRNA catabolic process + 2
                      nuclear polyadenylation-dependent tRNA catabolic process 6
                      positive regulation of tRNA catabolic process + 0
                      regulation of tRNA catabolic process + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.